{ "tc_result": [ { "organism_name": "Thiothrix eikelboomii", "strain": "strain=ATCC 49788", "accession": "GCA_900167255.1", "taxid": 92487, "species_taxid": 92487, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1358, "total_fragments": 1362, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Thiothrix winogradskyi", "strain": "strain=CT3", "accession": "GCA_021650935.1", "taxid": 96472, "species_taxid": 96472, "relation_to_type": "type", "validated": true, "ani": 80.3775, "matched_fragments": 121, "total_fragments": 1362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiothrix fructosivorans", "strain": "strain=ATCC 49748", "accession": "GCA_017349355.1", "taxid": 111770, "species_taxid": 111770, "relation_to_type": "type", "validated": true, "ani": 79.7539, "matched_fragments": 101, "total_fragments": 1362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiothrix subterranea", "strain": "strain=Ku-5", "accession": "GCA_016772315.1", "taxid": 2735563, "species_taxid": 2735563, "relation_to_type": "type", "validated": true, "ani": 79.5697, "matched_fragments": 114, "total_fragments": 1362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiothrix unzii", "strain": "strain=A1", "accession": "GCA_017901175.1", "taxid": 111769, "species_taxid": 111769, "relation_to_type": "type", "validated": true, "ani": 79.0346, "matched_fragments": 92, "total_fragments": 1362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiolinea disciformis", "strain": "strain=DSM 14473", "accession": "GCA_000371925.1", "taxid": 125614, "species_taxid": 125614, "relation_to_type": "type", "validated": true, "ani": 77.279, "matched_fragments": 212, "total_fragments": 1362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiofilum flexile", "strain": "strain=DSM 14609", "accession": "GCA_000380185.1", "taxid": 125627, "species_taxid": 125627, "relation_to_type": "type", "validated": true, "ani": 76.3569, "matched_fragments": 118, "total_fragments": 1362, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900167255.1", "gtdb_species": "s__Thiolinea eikelboomii", "ani": 100.0, "matched_fragments": 1358, "total_fragments": 1362, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiolinea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_017349355.1", "gtdb_species": "s__Thiothrix fructosivorans", "ani": 79.7503, "matched_fragments": 100, "total_fragments": 1362, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiothrix", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_008015155.1", "gtdb_species": "s__Thiolinea sp008015155", "ani": 79.4833, "matched_fragments": 659, "total_fragments": 1362, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiolinea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018822845.1", "gtdb_species": "s__Thiothrix sp018822845", "ani": 77.8375, "matched_fragments": 52, "total_fragments": 1362, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiothrix", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.95", "min_intra_species_ani": "99.95", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.95", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_016711335.1", "gtdb_species": "s__Thiofilum sp016711335", "ani": 77.3538, "matched_fragments": 124, "total_fragments": 1362, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiofilum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000371925.1", "gtdb_species": "s__Thiolinea disciformis", "ani": 77.2003, "matched_fragments": 211, "total_fragments": 1362, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiolinea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002747435.1", "gtdb_species": "s__Thiolinea sp002747435", "ani": 76.781, "matched_fragments": 86, "total_fragments": 1362, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiolinea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000380185.1", "gtdb_species": "s__Thiofilum flexile", "ani": 76.3569, "matched_fragments": 118, "total_fragments": 1362, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiofilum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }