{
    "type": "genome",
    "identifier": "GCF_900182765.1",
    "organism": "Halobellus salinus",
    "title": "Halobellus salinus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE - JOINT GENOME INSTITUTE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_900182765.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN06265347",
        "wgs_master": "FXTR00000000.1",
        "refseq_category": "na",
        "taxid": "931585",
        "species_taxid": "931585",
        "organism_name": "Halobellus salinus",
        "infraspecific_name": "strain=DSM 18730",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/04/08",
        "asm_name": "IMG-taxon 2724679816 annotated assembly",
        "asm_submitter": "DOE - JOINT GENOME INSTITUTE",
        "gbrs_paired_asm": "GCA_900182765.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/182/765/GCF_900182765.1_IMG-taxon_2724679816_annotated_assembly",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "archaea",
        "genome_size": "3067455",
        "genome_size_ungapped": "3067455",
        "gc_percent": "65.500000",
        "replicon_count": "0",
        "scaffold_count": "37",
        "contig_count": "37",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_900182765.1-RS_2024_05_12",
        "annotation_date": "2024-05-12",
        "total_gene_count": "3035",
        "protein_coding_gene_count": "2872",
        "non_coding_gene_count": "61",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-04-08",
    "dateModified": "2023-04-08",
    "datePublished": "2023-04-08",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Halobellus salinus"
        ],
        "sample_taxid": [
            "931585"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "missing"
        ],
        "sample_host_location_id": [],
        "data_size": "0.846 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
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        "completeness": 95.83,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3067455",
        "Number of Sequences": "37",
        "Longest Sequences (bp)": "342903",
        "N50 (bp)": "166367",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.4",
        "Number of CDSs": "2945",
        "Average Protein Length": "296.9",
        "Coding Ratio (%)": "85.5",
        "Number of rRNAs": "3",
        "Number of tRNAs": "55",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Halobellus salinus",
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                "species_taxid": 931585,
                "relation_to_type": "type",
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            },
            {
                "organism_name": "Halobellus ruber",
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                "accession": "GCA_014212355.1",
                "taxid": 2761102,
                "species_taxid": 2761102,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.1955,
                "matched_fragments": 714,
                "total_fragments": 1004,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halobellus limi",
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                "accession": "GCA_004799685.1",
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                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "species_taxid": 699433,
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                "validated": true,
                "ani": 80.5998,
                "matched_fragments": 553,
                "total_fragments": 1004,
                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Halobellus rufus",
                "strain": "strain=CBA1103",
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                "taxid": 1448860,
                "species_taxid": 1448860,
                "relation_to_type": "type",
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                "ani": 80.5121,
                "matched_fragments": 508,
                "total_fragments": 1004,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halobellus litoreus",
                "strain": "strain=GX31",
                "accession": "GCA_024464595.1",
                "taxid": 755310,
                "species_taxid": 755310,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halobellus clavatus",
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                "accession": "GCA_900107195.1",
                "taxid": 660517,
                "species_taxid": 660517,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.8504,
                "matched_fragments": 472,
                "total_fragments": 1004,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halobellus captivus",
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                "accession": "GCA_007655485.1",
                "taxid": 2592614,
                "species_taxid": 2592614,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 463,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCF_014646875.1",
                "gtdb_species": "s__Halobellus salinus",
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloferacaceae;g__Halobellus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004799685.1",
                "gtdb_species": "s__Halobellus limi",
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                "total_fragments": 1004,
                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloferacaceae;g__Halobellus",
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            },
            {
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloferacaceae;g__Halobellus",
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            },
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
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        "gc_content": null,
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        "facultative_respiration": 0.0,
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        "aerobic_respiration": 1.0,
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        "bacillus_cell_shape": 0.0,
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        "vibrio_cell_shape": 0.0,
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    "_genome_taxon": [
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        "salinus"
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}