{ "type": "genome", "identifier": "GCF_900185905.1", "organism": "Enterobacter cancerogenus", "title": "Enterobacter cancerogenus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "JUSTUS LIEBIG UNIVERSITY", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900185905.1", "bioproject": "PRJNA224116", "biosample": "SAMEA104113916", "wgs_master": "FYBA00000000.1", "refseq_category": "na", "taxid": "69218", "species_taxid": "69218", "organism_name": "Enterobacter cancerogenus", "infraspecific_name": "na", "isolate": "Enterobacter cancerogenus ATCC33241", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/06/15", "asm_name": "ASM90018590v1", "asm_submitter": "JUSTUS LIEBIG UNIVERSITY", "gbrs_paired_asm": "GCA_900185905.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/185/905/GCF_900185905.1_ASM90018590v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4879939", "genome_size_ungapped": "4879939", "gc_percent": "55.500000", "replicon_count": "0", "scaffold_count": "142", "contig_count": "142", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900185905.1-RS_2024_07_31", "annotation_date": "2024-07-31", "total_gene_count": "4703", "protein_coding_gene_count": "4496", "non_coding_gene_count": "115", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-06-15", "dateModified": "2017-06-15", "datePublished": "2017-06-15", "_annotation": { "sample_count": 1, "sample_organism": [ "Enterobacter cancerogenus" ], "sample_taxid": [ "69218" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Enterobacter cancerogenus", "strain": "strain=FDAARGOS 1428", "accession": "GCA_019047785.1", "taxid": 69218, "species_taxid": 69218, "relation_to_type": "type", "validated": true, "ani": 99.9985, "matched_fragments": 1583, "total_fragments": 1596, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Enterobacter wuhouensis", "strain": "strain=WCHEW120002", "accession": "GCA_004331265.1", "taxid": 2529381, "species_taxid": 2529381, "relation_to_type": "type", "validated": true, "ani": 87.5421, "matched_fragments": 1263, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter quasimori", "strain": "strain=090044", "accession": "GCA_003964905.1", "taxid": 2838947, "species_taxid": 2838947, "relation_to_type": "type", "validated": true, "ani": 87.4734, "matched_fragments": 1221, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter oligotrophicus", "strain": "strain=CCA6", "accession": "GCA_009176645.1", "taxid": 2478464, "species_taxid": 2478464, "relation_to_type": "type", "validated": true, "ani": 87.4308, "matched_fragments": 1241, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter roggenkampii", "strain": "strain=DSM 16690", "accession": "GCA_024390995.1", "taxid": 1812935, "species_taxid": 1812935, "relation_to_type": "type", "validated": true, "ani": 87.3622, "matched_fragments": 1149, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter bugandensis", "strain": "strain=FDAARGOS 1427", "accession": "GCA_019046905.1", "taxid": 881260, "species_taxid": 881260, "relation_to_type": "type", "validated": true, "ani": 87.3477, "matched_fragments": 1228, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter mori", "strain": "strain=LMG 25706", "accession": "GCA_000211415.1", "taxid": 539813, "species_taxid": 539813, "relation_to_type": "type", "validated": true, "ani": 87.2676, "matched_fragments": 1186, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter bugandensis", "strain": "", "accession": "GCA_900324475.1", "taxid": 881260, "species_taxid": 881260, "relation_to_type": "type", "validated": true, "ani": 87.2371, "matched_fragments": 1235, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter hormaechei subsp. oharae", "strain": "strain=DSM 16687", "accession": "GCA_001729705.1", "taxid": 301102, "species_taxid": 158836, "relation_to_type": "type", "validated": true, "ani": 87.2357, "matched_fragments": 1229, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter chengduensis", "strain": "strain=WCHECl-C4 = WCHECh050004", "accession": "GCA_001984825.2", "taxid": 2494701, "species_taxid": 2494701, "relation_to_type": "type", "validated": true, "ani": 87.2282, "matched_fragments": 1211, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter hormaechei subsp. oharae", "strain": "strain=FDAARGOS_1533", "accession": "GCA_020097195.1", "taxid": 301102, "species_taxid": 158836, "relation_to_type": "type", "validated": true, "ani": 87.2201, "matched_fragments": 1241, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter hormaechei", "strain": "strain=FDAARGOS 1433", "accession": "GCA_019048245.1", "taxid": 158836, "species_taxid": 158836, "relation_to_type": "suspected-type", "validated": true, "ani": 87.0982, "matched_fragments": 1228, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter hormaechei subsp. xiangfangensis", "strain": "strain=LMG27195", "accession": "GCA_001729785.1", "taxid": 1296536, "species_taxid": 158836, "relation_to_type": "type", "validated": true, "ani": 87.0309, "matched_fragments": 1228, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter sichuanensis", "strain": "strain=WCHECL1597", "accession": "GCA_025002605.1", "taxid": 2071710, "species_taxid": 2071710, "relation_to_type": "type", "validated": true, "ani": 86.8353, "matched_fragments": 1166, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter cloacae", "strain": "strain=DSM 30054", "accession": "GCA_021469225.1", "taxid": 550, "species_taxid": 550, "relation_to_type": "type", "validated": true, "ani": 86.7688, "matched_fragments": 1209, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leclercia pneumoniae", "strain": "strain=49125", "accession": "GCA_017348915.1", "taxid": 2815358, "species_taxid": 2815358, "relation_to_type": "type", "validated": true, "ani": 84.5639, "matched_fragments": 1048, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leclercia pneumoniae", "strain": "strain=49125", "accession": "GCA_018987305.1", "taxid": 2815358, "species_taxid": 2815358, "relation_to_type": "type", "validated": true, "ani": 84.5012, "matched_fragments": 1075, "total_fragments": 1596, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 98.96, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_019047785.1", "gtdb_species": "s__Enterobacter cancerogenus", "ani": 99.9985, "matched_fragments": 1583, "total_fragments": 1596, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.78", "min_intra_species_ani": 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