{ "type": "genome", "identifier": "GCF_900188245.1", "organism": "Belliella buryatensis", "title": "Belliella buryatensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE - JOINT GENOME INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900188245.1", "bioproject": "PRJNA224116", "biosample": "SAMN06295967", "wgs_master": "FZOK00000000.1", "refseq_category": "reference genome", "taxid": "1500549", "species_taxid": "1500549", "organism_name": "Belliella buryatensis", "infraspecific_name": "strain=5C", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/07/16", "asm_name": "IMG-taxon 2706794919 annotated assembly", "asm_submitter": "DOE - JOINT GENOME INSTITUTE", "gbrs_paired_asm": "GCA_900188245.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/188/245/GCF_900188245.1_IMG-taxon_2706794919_annotated_assembly", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3880061", "genome_size_ungapped": "3878901", "gc_percent": "38.500000", "replicon_count": "0", "scaffold_count": "52", "contig_count": "52", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900188245.1-RS_2024_10_22", "annotation_date": "2024-10-22", "total_gene_count": "3347", "protein_coding_gene_count": "3284", "non_coding_gene_count": "47", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-07-16", "dateModified": "2017-07-16", "datePublished": "2017-07-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Belliella buryatensis" ], "sample_taxid": [ "1500549" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "1.096 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3880061", "Number of Sequences": "52", "Longest Sequences (bp)": "464824", "N50 (bp)": "213228", "Gap Ratio (%)": "0.029896", "GCcontent (%)": "38.3", "Number of CDSs": "3262", "Average Protein Length": "343.4", "Coding Ratio (%)": "86.6", "Number of rRNAs": "3", "Number of tRNAs": "39", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Belliella buryatensis", "strain": "strain=5C", "accession": "GCA_900188245.1", "taxid": 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"total_fragments": 1267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mongoliitalea daihaiensis", "strain": "strain=X100-76", "accession": "GCA_021596945.1", "taxid": 2782006, "species_taxid": 2782006, "relation_to_type": "type", "validated": true, "ani": 77.5514, "matched_fragments": 191, "total_fragments": 1267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquiflexum aquatile", "strain": "strain=Z0201", "accession": "GCA_003316845.1", "taxid": 2249427, "species_taxid": 2249427, "relation_to_type": "type", "validated": true, "ani": 77.0042, "matched_fragments": 157, "total_fragments": 1267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algoriphagus vanfongensis", "strain": "strain=DSM 17529", "accession": "GCA_000429465.1", "taxid": 426371, "species_taxid": 426371, "relation_to_type": "type", "validated": true, "ani": 76.9225, "matched_fragments": 104, "total_fragments": 1267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Echinicola salinicaeni", "strain": "strain=P51", "accession": "GCA_014280965.1", "taxid": 2762757, "species_taxid": 2762757, "relation_to_type": "type", "validated": true, "ani": 76.7874, "matched_fragments": 109, "total_fragments": 1267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algoriphagus algorifonticola", "strain": "strain=hg1", "accession": "GCA_007655305.1", "taxid": 2593007, "species_taxid": 2593007, "relation_to_type": "type", "validated": true, "ani": 76.7848, "matched_fragments": 117, "total_fragments": 1267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algoriphagus aquimarinus", "strain": "strain=DSM 23399", "accession": "GCA_900112005.1", "taxid": 237018, "species_taxid": 237018, "relation_to_type": "type", "validated": true, "ani": 76.4637, "matched_fragments": 113, "total_fragments": 1267, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { 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