{
    "type": "genome",
    "identifier": "GCF_900215575.1",
    "organism": "Natronoarchaeum philippinense",
    "title": "Natronoarchaeum philippinense",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE - JOINT GENOME INSTITUTE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_900215575.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN06269185",
        "wgs_master": "OBEJ00000000.1",
        "refseq_category": "reference genome",
        "taxid": "558529",
        "species_taxid": "558529",
        "organism_name": "Natronoarchaeum philippinense",
        "infraspecific_name": "strain=DSM 27208",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/09/28",
        "asm_name": "IMG-taxon 2728369221 annotated assembly",
        "asm_submitter": "DOE - JOINT GENOME INSTITUTE",
        "gbrs_paired_asm": "GCA_900215575.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/215/575/GCF_900215575.1_IMG-taxon_2728369221_annotated_assembly",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "archaea",
        "genome_size": "3164179",
        "genome_size_ungapped": "3164179",
        "gc_percent": "65.000000",
        "replicon_count": "0",
        "scaffold_count": "11",
        "contig_count": "11",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_900215575.1-RS_2024_10_22",
        "annotation_date": "2024-10-22",
        "total_gene_count": "3326",
        "protein_coding_gene_count": "3244",
        "non_coding_gene_count": "54",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-09-28",
    "dateModified": "2017-09-28",
    "datePublished": "2017-09-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Natronoarchaeum philippinense"
        ],
        "sample_taxid": [
            "558529"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "missing"
        ],
        "sample_host_location_id": [],
        "data_size": "0.866 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.45,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3164179",
        "Number of Sequences": "11",
        "Longest Sequences (bp)": "1279368",
        "N50 (bp)": "788061",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.2",
        "Number of CDSs": "3245",
        "Average Protein Length": "285.6",
        "Coding Ratio (%)": "87.9",
        "Number of rRNAs": "3",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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            },
            {
                "organism_name": "Natronoarchaeum rubrum",
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                "accession": "GCA_024494695.1",
                "taxid": 755311,
                "species_taxid": 755311,
                "relation_to_type": "type",
                "validated": true,
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                "status": "below_threshold"
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            {
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                "taxid": 2528831,
                "species_taxid": 2528831,
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                "matched_fragments": 514,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Halostella limicola",
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                "taxid": 2448456,
                "species_taxid": 2448456,
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                "matched_fragments": 520,
                "total_fragments": 1050,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halobiforma haloterrestris",
                "strain": "strain=DSM 13078",
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                "species_taxid": 148448,
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halosimplex halophilum",
                "strain": "strain=TH32",
                "accession": "GCA_004698125.1",
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                "species_taxid": 2559572,
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                "status": "below_threshold"
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            {
                "organism_name": "Halorussus rarus",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
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                "accession": "GCF_900215575.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__QS-9-68-17;g__Halostella",
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}