{
    "type": "genome",
    "identifier": "GCF_900239495.1",
    "organism": "Tenacibaculum finnmarkense genomovar ulcerans",
    "title": "Tenacibaculum finnmarkense genomovar ulcerans",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "INRA",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_900239495.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA104389409",
        "wgs_master": "OENE00000000.1",
        "refseq_category": "na",
        "taxid": "2781388",
        "species_taxid": "2781243",
        "organism_name": "Tenacibaculum finnmarkense genomovar ulcerans",
        "infraspecific_name": "strain=TNO010",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/04/03",
        "asm_name": "TNO010_V1",
        "asm_submitter": "INRA",
        "gbrs_paired_asm": "GCA_900239495.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/239/495/GCF_900239495.1_TNO010_V1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2815918",
        "genome_size_ungapped": "2815918",
        "gc_percent": "31.000000",
        "replicon_count": "0",
        "scaffold_count": "55",
        "contig_count": "55",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_900239495.1-RS_2024_10_26",
        "annotation_date": "2024-10-26",
        "total_gene_count": "2503",
        "protein_coding_gene_count": "2433",
        "non_coding_gene_count": "56",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-04-03",
    "dateModified": "2020-04-03",
    "datePublished": "2020-04-03",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Tenacibaculum finnmarkense genomovar ulcerans"
        ],
        "sample_taxid": [
            "2781388"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.772 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2815918",
        "Number of Sequences": "55",
        "Longest Sequences (bp)": "429062",
        "N50 (bp)": "232018",
        "Gap Ratio (%)": "0.002486",
        "GCcontent (%)": "31.1",
        "Number of CDSs": "2440",
        "Average Protein Length": "334.8",
        "Coding Ratio (%)": "87.0",
        "Number of rRNAs": "0",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Tenacibaculum finnmarkense",
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                "accession": "GCA_900239495.1",
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                "species_taxid": 2781243,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 910,
                "total_fragments": 910,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Tenacibaculum finnmarkense",
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                "accession": "GCA_900239185.1",
                "taxid": 2781243,
                "species_taxid": 2781243,
                "relation_to_type": "type",
                "validated": true,
                "ani": 96.8963,
                "matched_fragments": 801,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Tenacibaculum haliotis",
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                "accession": "GCA_025215075.1",
                "taxid": 1888914,
                "species_taxid": 1888914,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tenacibaculum ovolyticum",
                "strain": "strain=DSM 18103",
                "accession": "GCA_000430545.1",
                "taxid": 104270,
                "species_taxid": 104270,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.0831,
                "matched_fragments": 596,
                "total_fragments": 910,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tenacibaculum pelagium",
                "strain": "strain=S7007",
                "accession": "GCA_014062345.1",
                "taxid": 2759527,
                "species_taxid": 2759527,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.9439,
                "matched_fragments": 459,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tenacibaculum aiptasiae",
                "strain": "strain=a4",
                "accession": "GCA_008806755.1",
                "taxid": 426481,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 79.2906,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tenacibaculum mesophilum",
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                "accession": "GCA_009362255.1",
                "taxid": 104268,
                "species_taxid": 104268,
                "relation_to_type": "type",
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                "ani": 78.7822,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tenacibaculum todarodis",
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                "accession": "GCA_001889045.1",
                "taxid": 1850252,
                "species_taxid": 1850252,
                "relation_to_type": "type",
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                "matched_fragments": 362,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tenacibaculum aquimarinum",
                "strain": "strain=K20-16",
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                "taxid": 2910675,
                "species_taxid": 2910675,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5401,
                "matched_fragments": 354,
                "total_fragments": 910,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polaribacter butkevichii",
                "strain": "strain=KCTC 12100",
                "accession": "GCA_002954605.1",
                "taxid": 218490,
                "species_taxid": 218490,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5117,
                "matched_fragments": 361,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polaribacter pectinis",
                "strain": "strain=L12M9",
                "accession": "GCA_014352875.1",
                "taxid": 2738844,
                "species_taxid": 2738844,
                "relation_to_type": "type",
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                "ani": 78.1514,
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                "total_fragments": 910,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polaribacter cellanae",
                "strain": "strain=SM13",
                "accession": "GCA_017569185.1",
                "taxid": 2818493,
                "species_taxid": 2818493,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7617,
                "matched_fragments": 309,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polaribacter septentrionalilitoris",
                "strain": "strain=ANORD1",
                "accession": "GCA_009832745.1",
                "taxid": 2494657,
                "species_taxid": 2494657,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polaribacter batillariae",
                "strain": "strain=G4M1",
                "accession": "GCA_017498485.1",
                "taxid": 2808900,
                "species_taxid": 2808900,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3769,
                "matched_fragments": 284,
                "total_fragments": 910,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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        "gtdb_result": [
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                "accession": "GCF_900239495.1",
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                "total_fragments": 910,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Tenacibaculum",
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                "min_intra_species_ani": "98.40",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Tenacibaculum",
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            {
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Tenacibaculum",
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            {
                "accession": "GCF_900239505.1",
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                "mean_intra_species_ani": "N/A",
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            },
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            {
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}