{ "type": "genome", "identifier": "GCF_900258505.1", "organism": "Brachybacterium timonense", "title": "Brachybacterium timonense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "URMITE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900258505.1", "bioproject": "PRJNA224116", "biosample": "SAMEA104557109", "wgs_master": "OIWY00000000.1", "refseq_category": "reference genome", "taxid": "2050896", "species_taxid": "2050896", "organism_name": "Brachybacterium timonense", "infraspecific_name": "strain=Marseille-P4339", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/02/17", "asm_name": "PRJEB23296", "asm_submitter": "URMITE", "gbrs_paired_asm": "GCA_900258505.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/258/505/GCF_900258505.1_PRJEB23296", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3092588", "genome_size_ungapped": "3092417", "gc_percent": "67.500000", "replicon_count": "0", "scaffold_count": "4", "contig_count": "9", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900258505.1-RS_2024_05_03", "annotation_date": "2024-05-03", "total_gene_count": "2706", "protein_coding_gene_count": "2601", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-02-17", "dateModified": "2018-02-17", "datePublished": "2018-02-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Brachybacterium timonense" ], "sample_taxid": [ "2050896" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], 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"accession": "GCA_900163655.1", "taxid": 47847, "species_taxid": 47847, "relation_to_type": "type", "validated": true, "ani": 79.1996, "matched_fragments": 355, "total_fragments": 1029, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brachybacterium halotolerans subsp. kimchii", "strain": "strain=CBA3105", "accession": "GCA_020792675.1", "taxid": 2887346, "species_taxid": 2795215, "relation_to_type": "type", "validated": true, "ani": 79.1564, "matched_fragments": 405, "total_fragments": 1029, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brachybacterium halotolerans", "strain": "strain=MASK1Z-5", "accession": "GCA_016623465.1", "taxid": 2795215, "species_taxid": 2795215, "relation_to_type": "type", "validated": true, "ani": 79.1395, "matched_fragments": 369, "total_fragments": 1029, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brachybacterium endophyticum", "strain": "strain=M1HQ-2", "accession": "GCA_003130585.1", "taxid": 2182385, "species_taxid": 2182385, "relation_to_type": "type", "validated": true, "ani": 79.1394, "matched_fragments": 353, "total_fragments": 1029, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brachybacterium vulturis", "strain": "strain=VM2412", "accession": "GCA_002407185.1", "taxid": 2017484, "species_taxid": 2017484, "relation_to_type": "type", "validated": true, "ani": 79.0789, "matched_fragments": 429, "total_fragments": 1029, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brachybacterium kimchii", "strain": "strain=CBA3104", "accession": "GCA_023373525.1", "taxid": 2942909, "species_taxid": 2942909, "relation_to_type": "type", "validated": true, "ani": 78.994, "matched_fragments": 390, "total_fragments": 1029, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brachybacterium subflavum", "strain": "strain=CFH 10395", "accession": "GCA_009299795.1", "taxid": 2585206, 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