{ "type": "genome", "identifier": "GCF_900444835.1", "organism": "Acinetobacter haemolyticus", "title": "Acinetobacter haemolyticus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "SC", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900444835.1", "bioproject": "PRJNA224116", "biosample": "SAMEA4504056", "wgs_master": "UFRR00000000.1", "refseq_category": "na", "taxid": "29430", "species_taxid": "29430", "organism_name": "Acinetobacter haemolyticus", "infraspecific_name": "strain=NCTC10305", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/08/08", "asm_name": "51699_D01", "asm_submitter": "SC", "gbrs_paired_asm": "GCA_900444835.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/444/835/GCF_900444835.1_51699_D01", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3598237", "genome_size_ungapped": "3598237", "gc_percent": "40.000000", "replicon_count": "0", "scaffold_count": "6", "contig_count": "6", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900444835.1-RS_2025_01_07", "annotation_date": "2025-01-07", "total_gene_count": "3427", "protein_coding_gene_count": "3178", "non_coding_gene_count": "100", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-08-08", "dateModified": "2018-08-08", "datePublished": "2018-08-08", "_annotation": { "sample_count": 1, "sample_organism": [ "Acinetobacter haemolyticus" ], "sample_taxid": [ "29430" ], "sample_host_organism": [ "not available" ], "sample_host_organism_id": [], "sample_host_disease": [ "not available: to be reported later" ], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "1.013 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3598237", "Number of Sequences": "6", "Longest Sequences (bp)": "3531042", "N50 (bp)": "3531042", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "39.8", "Number of CDSs": "3413", "Average Protein Length": "306.6", "Coding Ratio (%)": "87.3", "Number of rRNAs": "18", "Number of tRNAs": "78", "Number of CRISPRs": "3" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Acinetobacter haemolyticus", "strain": "strain=NCTC10305", "accession": "GCA_900444835.1", "taxid": 29430, "species_taxid": 29430, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1191, "total_fragments": 1198, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acinetobacter haemolyticus", "strain": "strain=FDAARGOS_1392", "accession": "GCA_019355995.1", "taxid": 29430, "species_taxid": 29430, "relation_to_type": "type", "validated": true, "ani": 99.9951, "matched_fragments": 1167, "total_fragments": 1198, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acinetobacter haemolyticus", "strain": "strain=CIP 64.3", "accession": "GCA_000369065.1", "taxid": 29430, "species_taxid": 29430, "relation_to_type": "type", "validated": true, "ani": 99.9727, "matched_fragments": 1148, "total_fragments": 1198, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acinetobacter haemolyticus", "strain": "strain=MTCC 9819", "accession": "GCA_000430205.1", "taxid": 29430, "species_taxid": 29430, "relation_to_type": "type", "validated": true, "ani": 99.8731, "matched_fragments": 1041, "total_fragments": 1198, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acinetobacter junii", "strain": "strain=NCTC10307", "accession": "GCA_900444875.1", "taxid": 40215, "species_taxid": 40215, "relation_to_type": "type", "validated": true, "ani": 84.1492, "matched_fragments": 695, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter junii", "strain": "strain=CIP 64.5", "accession": "GCA_000368765.1", "taxid": 40215, "species_taxid": 40215, "relation_to_type": "type", "validated": true, "ani": 84.139, "matched_fragments": 691, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter colistiniresistens", "strain": "strain=NIPH 2036", "accession": "GCA_000413935.1", "taxid": 280145, "species_taxid": 280145, "relation_to_type": "type", "validated": true, "ani": 82.8504, "matched_fragments": 712, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter modestus", "strain": "strain=CCM 8639", "accession": "GCA_014636095.1", "taxid": 1776740, "species_taxid": 1776740, "relation_to_type": "type", "validated": true, "ani": 82.8485, "matched_fragments": 689, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter gyllenbergii", "strain": "strain=MTCC 11365", "accession": "GCA_000414075.1", "taxid": 134534, "species_taxid": 134534, "relation_to_type": "type", "validated": true, "ani": 82.8387, "matched_fragments": 732, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter proteolyticus", "strain": "strain=NIPH 809", "accession": "GCA_000367945.1", "taxid": 1776741, "species_taxid": 1776741, "relation_to_type": "type", "validated": true, "ani": 82.8124, "matched_fragments": 744, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter courvalinii", "strain": "strain=CCUG 67960", "accession": "GCA_008802255.1", "taxid": 280147, "species_taxid": 280147, "relation_to_type": "type", "validated": true, "ani": 82.3316, "matched_fragments": 700, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter ihumii", "strain": "strain=Marseille-P8049", "accession": "GCA_900625095.1", "taxid": 2483802, "species_taxid": 2483802, "relation_to_type": "type", "validated": true, "ani": 79.3686, "matched_fragments": 366, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter silvestris", "strain": "strain=ANC 4999", "accession": "GCA_002135235.1", "taxid": 1977882, "species_taxid": 1977882, "relation_to_type": "type", "validated": true, "ani": 79.1449, "matched_fragments": 347, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCF_000369065.1", 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