# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_7	LOCUS_00060	sequence01:5459..5740(+)	frameshift		5638	WP_000679265.1	iron export ABC transporter permease subunit FetB	64.5	22.6	88.3
MGA_8	LOCUS_00070	sequence01:5725..6255(+)	frameshift		5638	WP_000679254.1	iron export ABC transporter permease subunit FetB	100.0	66.4	100.0
MGA_157	LOCUS_01560	sequence01:145021..145179(-)	partial			WP_001289699.1	thiocillin/thiostrepton family thiazolyl peptide	73.1	73.1	100.0
MGA_158	LOCUS_01570	sequence01:145225..145383(-)	partial			WP_001289699.1	thiocillin/thiostrepton family thiazolyl peptide	73.1	73.1	100.0
MGA_159	LOCUS_01580	sequence01:145429..145587(-)	partial			WP_001289699.1	thiocillin/thiostrepton family thiazolyl peptide	73.1	73.1	100.0
MGA_160	LOCUS_01590	sequence01:145632..145790(-)	partial			WP_001289699.1	thiocillin/thiostrepton family thiazolyl peptide	73.1	73.1	100.0
MGA_163	LOCUS_01620	sequence01:147244..147528(+)	frameshift,internal_stop_codon	147526..147528(+)	147577,147543	WP_090635852.1	purine/pyrimidine permease	100.0	22.1	66.0
MGA_164	LOCUS_01630	sequence01:147595..147822(-)	frameshift		148001,147893,148022,147932,147742	WP_094374263.1	IS3 family transposase	80.0	13.5	61.7
MGA_165	LOCUS_01640	sequence01:148262..148402(-)	frameshift		148395	WP_000460485.1	Lrp/AsnC family transcriptional regulator	73.9	23.9	91.2
MGA_166	LOCUS_01650	sequence01:148363..148704(-)	frameshift		148395	WP_000460485.1	Lrp/AsnC family transcriptional regulator	95.6	76.1	94.4
MGA_182	LOCUS_01810	sequence01:164323..165297(-)	internal_stop_codon	164323..164325(-)		WP_188384634.1	TniQ family protein	96.9	71.1	42.2
MGA_184	LOCUS_01830	sequence01:166488..166880(-)	frameshift,internal_stop_codon	166484..166486(-)	166801,166762,166972,167053	WP_028402264.1	IS6 family transposase	80.0	44.3	66.3
MGA_185	LOCUS_01840	sequence01:167342..167530(-)	partial			WP_001030755.1	thiocillin family RiPP	67.7	67.7	100.0
MGA_198	LOCUS_01970	sequence01:177863..178276(+)	frameshift		178219,178255	WP_026049096.1	IS6 family transposase	97.1	56.6	78.2
MGA_199	LOCUS_01980	sequence01:178170..178568(+)	frameshift		178219,178255	WP_028402264.1	IS6 family transposase	87.9	49.4	65.5
MGA_250	LOCUS_02490	sequence01:225196..225717(+)	frameshift		225651	WP_139368210.1	IS3 family transposase	98.8	37.9	60.2
MGA_251	LOCUS_02500	sequence01:225744..226553(+)	frameshift		225651	WP_126660861.1	IS3 family transposase	100.0	59.6	85.9
MGA_254	LOCUS_02530	sequence01:228973..229719(-)	frameshift		229778	WP_033687181.1	PDZ domain-containing protein	100.0	62.0	97.2
MGA_255	LOCUS_02540	sequence01:229725..230156(-)	frameshift		229778	WP_033687181.1	PDZ domain-containing protein	88.1	31.5	98.4
MGA_299	LOCUS_02980	sequence01:274565..275233(+)	frameshift		275224	WP_000381978.1	cytochrome ubiquinol oxidase subunit I	99.1	48.8	100.0
MGA_300	LOCUS_02990	sequence01:275266..275919(+)	frameshift		275218	WP_000381978.1	cytochrome ubiquinol oxidase subunit I	100.0	48.1	99.1
MGA_421	LOCUS_04200	sequence01:395170..395703(-)	partial			WP_000346278.1	DNA-directed RNA polymerase subunit delta	58.2	58.2	100.0
MGA_434	LOCUS_04330	sequence01:411719..412198(-)	frameshift,internal_stop_codon	412292..412294(-)	412301	WP_000619237.1	response regulator transcription factor	100.0	79.5	99.4
MGA_547	LOCUS_05460	sequence01:543491..545149(-)	frameshift		545085	WP_001113783.1	DHH family phosphoesterase	96.2	80.8	99.1
MGA_548	LOCUS_05470	sequence01:545056..545463(-)	frameshift		545085	WP_001113783.1	DHH family phosphoesterase	88.9	18.3	94.2
MGA_635	LOCUS_06340	sequence01:646016..646750(+)	frameshift		646723	WP_000152276.1	cysteine--tRNA ligase	98.0	51.4	98.7
MGA_636	LOCUS_06350	sequence01:646747..647412(+)	frameshift		646723	WP_000152276.1	cysteine--tRNA ligase	100.0	47.5	95.0
MGA_753	LOCUS_07510	sequence01:753777..753911(+)	partial			WP_001984858.1	hypothetical protein	100.0	69.8	93.2
MGA_929	LOCUS_09230	sequence04:117803..117964(+)	frameshift		117976,117958	WP_000214646.1	YfmQ family protein	98.1	36.9	100.0
MGA_996	LOCUS_09890	sequence05:87631..87822(+)	partial			WP_001290392.1	YjcZ family sporulation protein	63.5	63.5	87.5
MGA_1031	LOCUS_10240	sequence05:119401..120174(+)	frameshift		120150	WP_001044821.1	ferrous iron transport protein B	97.7	37.9	96.0
MGA_1032	LOCUS_10250	sequence05:120164..121390(+)	frameshift		120153	WP_001044821.1	ferrous iron transport protein B	100.0	61.6	98.8
MGA_1034	LOCUS_10270	sequence05:121632..122441(-)	frameshift		122533	WP_126660861.1	IS3 family transposase	100.0	59.6	85.1
MGA_1036	LOCUS_10290	sequence05:122870..122989(-)	internal_stop_codon	122870..122872(-)		WP_139368210.1	IS3 family transposase	100.0	8.7	74.4
MGA_1037	LOCUS_10300	sequence05:123085..123492(-)	internal_stop_codon	122870..122872(-)		WP_163262052.1	IS3 family transposase	100.0	29.9	91.1
MGA_1044	LOCUS_10370	sequence05:128758..129462(-)	partial			WP_000990093.1	YdcF family protein	100.0	67.8	100.0
MGA_1046	LOCUS_10390	sequence05:130868..131656(-)	frameshift		131727	WP_000017662.1	cytochrome d ubiquinol oxidase subunit II	100.0	76.6	96.2
MGA_1047	LOCUS_10400	sequence05:131707..131895(-)	frameshift		131727	WP_000017662.1	cytochrome d ubiquinol oxidase subunit II	90.3	16.4	100.0
MGA_1069	LOCUS_10620	sequence05:146911..147225(-)	partial			WP_015943159.1	catalase	97.1	14.8	44.1
MGA_1070	LOCUS_10630	sequence05:147188..147376(-)	partial			WP_015943159.1	catalase	75.8	6.9	59.6
MGA_1073	LOCUS_10660	sequence05:150257..151318(-)	partial			WP_000283544.1	collagen-like protein	71.7	71.7	86.6
MGA_1106	LOCUS_10990	sequence05:182948..183835(+)	partial			WP_000677604.1	protein VrrB	60.7	60.7	60.9
MGA_1117	LOCUS_11100	sequence05:191812..195741(+)	partial			WP_000796079.1	BclA-related collagen-like exosporium protein	12.6	12.6	86.7
MGA_1154	LOCUS_11470	sequence05:226091..230131(+)	partial			WP_000888025.1	DNA translocase FtsK	38.0	36.8	100.0
MGA_1166	LOCUS_11590	sequence05:238691..239014(+)	frameshift		238987	WP_000168209.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	94.4	28.3	95.0
MGA_1167	LOCUS_11600	sequence05:238974..239765(+)	frameshift		238987	WP_000168209.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	98.5	72.5	98.1
MGA_1224	LOCUS_12170	sequence05:288772..288921(+)	internal_stop_codon	288660..288662(+)		WP_000532716.1	anti-sigma factor	91.8	13.4	91.1
MGA_1317	LOCUS_13100	sequence05:380292..380999(+)	partial			WP_002195845.1	collagen-like protein	59.6	47.1	96.4
MGA_1359	LOCUS_13520	sequence05:420929..421096(+)	partial			WP_000274740.1	group I intron-associated PD-(D/E)XK endonuclease	65.5	26.3	91.7
MGA_1394	LOCUS_13870	sequence05:466240..466425(+)	partial			WP_001013390.1	DNA repair protein RadC	90.2	24.4	100.0
MGA_1420	LOCUS_14130	sequence05:490858..491733(+)	frameshift		491685,491727	WP_000690750.1	SafA/ExsA family spore coat assembly protein	99.7	50.0	81.4
MGA_1421	LOCUS_14140	sequence05:491781..492599(+)	frameshift		491718,491727	WP_000690750.1	SafA/ExsA family spore coat assembly protein	97.1	45.5	88.3
MGA_1521	LOCUS_15140	sequence05:586240..587979(+)	partial			WP_001157831.1	DNA internalization-related competence protein ComEC/Rec2	100.0	74.9	99.5
MGA_1552	LOCUS_15450	sequence05:614635..615072(+)	frameshift		615057	WP_000368943.1	pyruvate, water dikinase regulatory protein	97.2	52.2	100.0
MGA_1553	LOCUS_15460	sequence05:615069..615446(+)	frameshift		615054	WP_000368945.1	pyruvate, water dikinase regulatory protein	100.0	46.3	96.0
MGA_1609	LOCUS_16020	sequence05:668812..669117(+)	partial			WP_000923101.1	competence type IV pilus minor pilin ComGF	100.0	64.7	98.0
MGA_1630	LOCUS_16230	sequence05:684601..684723(+)	frameshift		684714	WP_011181851.1	hypothetical protein	97.5	62.9	66.7
MGA_1707	LOCUS_17000	sequence05:751954..752292(+)	frameshift		751860	WP_141528972.1	hypothetical protein	75.9	74.6	74.1
MGA_1755	LOCUS_17460	sequence06:6404..6853(-)	frameshift		6424	WP_000896001.1	class II aldolase/adducin family protein	96.6	68.9	97.2
MGA_1780	LOCUS_17710	sequence06:30670..31137(-)	frameshift		31145	WP_000147185.1	lactate utilization protein C	100.0	65.7	100.0
MGA_1781	LOCUS_17720	sequence06:31140..31379(-)	frameshift		31145	WP_000147185.1	lactate utilization protein C	100.0	33.5	100.0
MGA_1789	LOCUS_17800	sequence06:39189..39653(+)	frameshift		39629	WP_000890752.1	glycolate oxidase subunit GlcD	95.5	31.3	100.0
MGA_1790	LOCUS_17810	sequence06:39650..40600(+)	frameshift		39629	WP_000890752.1	glycolate oxidase subunit GlcD	100.0	67.2	96.8
MGA_1807	LOCUS_17980	sequence06:58336..59160(-)	partial			WP_017657918.1	DUF4047 domain-containing protein	66.1	66.1	99.4
MGA_1817	LOCUS_18080	sequence06:68917..69372(-)	frameshift		69415	WP_069702494.1	hypothetical protein	99.3	52.3	48.0
MGA_1818	LOCUS_18090	sequence06:69395..69763(-)	frameshift		69415	WP_069702494.1	hypothetical protein	90.2	38.3	62.7
MGA_1820	LOCUS_18110	sequence06:71366..71563(+)	frameshift,internal_stop_codon	71360..71362(+),71555..71557(+)	71515	WP_000345046.1	DUF3900 domain-containing protein	76.9	13.8	90.0
MGA_1821	LOCUS_18120	sequence06:71590..71787(+)	frameshift,internal_stop_codon	71360..71362(+),71555..71557(+)	71515	WP_000345046.1	DUF3900 domain-containing protein	100.0	17.9	73.8
MGA_1822	LOCUS_18130	sequence06:72930..73310(+)	partial			WP_002195290.1	hypothetical protein	100.0	30.7	96.0
MGA_1829	LOCUS_18200	sequence06:81056..81463(-)	internal_stop_codon	81056..81058(-)		WP_164690585.1	hypothetical protein	100.0	74.6	76.3
MGA_1830	LOCUS_18210	sequence06:81545..81703(-)	frameshift,internal_stop_codon	81780..81782(-)	81746	WP_001195374.1	hypothetical protein	98.1	57.3	82.4
MGA_1860	LOCUS_18510	sequence06:111551..111796(-)	frameshift,internal_stop_codon	111800..111802(-)	111899	WP_000347283.1	PH domain-containing protein	100.0	61.8	93.8
MGA_1881	LOCUS_18720	sequence06:127990..128877(+)	partial			WP_088322298.1	collagen-like protein	46.1	46.1	97.8
MGA_1966	LOCUS_19570	sequence06:214043..214306(-)	internal_stop_codon	214043..214045(-)		WP_136699874.1	hypothetical protein	100.0	73.7	89.7
MGA_2050	LOCUS_20410	sequence06:295675..295839(+)	partial			WP_002040757.1	hypothetical protein	74.1	58.0	100.0
MGA_2110	LOCUS_21010	sequence06:346835..347071(-)	partial			WP_094374154.1	DUF3967 domain-containing protein	100.0	39.2	69.2
MGA_2136	LOCUS_21270	sequence06:368240..368392(-)	partial			WP_165762389.1	hypothetical protein	76.0	74.5	97.4
MGA_2142	LOCUS_21330	sequence06:373610..374338(-)	partial			WP_041716287.1	cell envelope integrity protein TolA	47.1	42.5	66.7
MGA_2165	LOCUS_21560	sequence06:401873..402031(-)	partial			WP_000707073.1	hypothetical protein	96.2	26.8	68.6
MGA_2168	LOCUS_21590	sequence06:403013..403519(-)	frameshift		403072	WP_156576523.1	hypothetical protein	97.6	73.9	84.8
MGA_2174	LOCUS_21650	sequence06:405334..405528(-)	frameshift,internal_stop_codon	405789..405791(-)	405569	WP_156576523.1	hypothetical protein	93.8	27.0	90.0
MGA_2175	LOCUS_21660	sequence06:405561..405728(-)	frameshift,internal_stop_codon	405789..405791(-)	405569	WP_156576523.1	hypothetical protein	100.0	24.8	90.9
MGA_2176	LOCUS_21670	sequence06:406002..406367(-)	internal_stop_codon	406428..406430(-)		WP_000403325.1	SMI1/KNR4 family protein	98.3	76.3	49.2
MGA_2196	LOCUS_21870	sequence06:423709..423855(+)	partial			WP_001247567.1	YflJ family protein	100.0	60.0	97.9
MGA_2263	LOCUS_22540	sequence06:500128..501234(+)	frameshift		501225	WP_000838734.1	amino acid permease	99.7	78.6	95.4
MGA_2264	LOCUS_22550	sequence06:501228..501527(+)	frameshift		501225	WP_000838734.1	amino acid permease	100.0	21.2	97.0
MGA_2286	LOCUS_22770	sequence06:518588..519847(+)	partial			WP_211477932.1	cell wall-binding protein EntC	40.3	36.7	97.6
MGA_2380	LOCUS_23710	sequence06:615429..615899(-)	frameshift		615916	WP_000734488.1	C39 family peptidase	100.0	66.1	100.0
MGA_2381	LOCUS_23720	sequence06:615905..616138(-)	frameshift		615916	WP_000734488.1	C39 family peptidase	96.1	31.4	100.0
MGA_2429	LOCUS_24190	sequence07:31111..32127(-)	frameshift		32197	WP_000487894.1	SulP family inorganic anion transporter	100.0	70.0	95.3
MGA_2430	LOCUS_24200	sequence07:32144..32563(-)	frameshift		32194	WP_000487894.1	SulP family inorganic anion transporter	88.5	25.5	100.0
MGA_2431	LOCUS_24210	sequence07:32720..32950(-)	frameshift		32958	WP_128975795.1	cell wall-binding repeat-containing protein	100.0	18.3	97.4
MGA_2432	LOCUS_24220	sequence07:32920..33966(-)	frameshift		32958	WP_128975795.1	cell wall-binding repeat-containing protein	96.8	81.2	96.7
MGA_2439	LOCUS_24290	sequence07:39973..40227(-)	frameshift		40232	WP_000340503.1	HIT family protein	98.8	57.6	74.7
MGA_2440	LOCUS_24300	sequence07:40209..40400(-)	frameshift		40232	WP_000340503.1	HIT family protein	87.3	38.2	92.7
MGA_2485	LOCUS_24750	sequence07:89632..90366(-)	partial			WP_001187945.1	tetratricopeptide repeat protein	100.0	57.7	50.4
MGA_2490	LOCUS_24800	sequence07:94575..95057(-)	frameshift		95065	WP_000796568.1	heavy metal translocating P-type ATPase	100.0	20.3	100.0
MGA_2491	LOCUS_24810	sequence07:95057..96940(-)	frameshift		95065	WP_000796568.1	heavy metal translocating P-type ATPase	99.8	79.4	98.9
MGA_2533	LOCUS_25230	sequence07:148438..148677(-)	partial			WP_000548260.1	GNAT family N-acetyltransferase	100.0	27.4	92.4
MGA_2534	LOCUS_25240	sequence07:148668..148967(-)	partial			WP_000548260.1	GNAT family N-acetyltransferase	100.0	34.4	80.8
MGA_2535	LOCUS_25250	sequence07:149124..152204(-)	partial			WP_211477918.1	NEAT domain-containing protein	74.0	75.5	97.0
MGA_2599	LOCUS_25880	sequence07:217852..218694(+)	frameshift		218652	WP_001258445.1	sigma 54-interacting transcriptional regulator	95.0	57.0	100.0
MGA_2600	LOCUS_25890	sequence07:218978..219256(+)	partial			WP_001258445.1	sigma 54-interacting transcriptional regulator	100.0	19.7	100.0
MGA_2635	LOCUS_26240	sequence07:252437..253459(+)	partial			WP_000161209.1	LPXTG cell wall anchor domain-containing protein	25.6	25.6	86.2
MGA_2644	LOCUS_26330	sequence07:261114..261359(-)	partial			WP_000505774.1	hypothetical protein	60.5	60.5	81.6
MGA_2648	LOCUS_26370	sequence07:264909..265040(-)	partial			WP_000025951.1	ABC-F family ATP-binding cassette domain-containing protein	97.7	8.2	88.1
MGA_2806	LOCUS_27940	sequence08:37594..38001(+)	partial			WP_000943753.1	hypothetical protein	100.0	74.2	100.0
MGA_2824	LOCUS_28120	sequence08:51165..51614(+)	frameshift		51081	WP_009879470.1	AAA family ATPase	100.0	74.3	75.2
MGA_2884	LOCUS_28720	sequence08:108228..108599(-)	frameshift		108239	WP_000171342.1	VOC family protein	97.6	81.6	100.0
MGA_2975	LOCUS_29630	sequence08:216638..216796(+)	partial			WP_000953230.1	DUF5065 family protein	100.0	71.2	100.0
MGA_2980	LOCUS_29680	sequence08:220109..220264(+)	partial			WP_000865853.1	bile acid:sodium symporter family protein	98.0	14.6	84.0
MGA_2999	LOCUS_29870	sequence08:237902..238213(+)	partial			WP_000709181.1	agmatine deiminase family protein	92.2	26.0	48.0
MGA_3020	LOCUS_30080	sequence08:259098..259325(+)	partial			WP_001047304.1	hypothetical protein	73.3	73.3	100.0
MGA_3053	LOCUS_30410	sequence08:284249..284548(+)	partial			WP_200203182.1	LysE family translocator	74.7	37.1	59.0
MGA_3058	LOCUS_30460	sequence08:289270..290559(+)	partial			WP_000981223.1	anti-sigma factor domain-containing protein	67.6	67.6	88.3
MGA_3061	LOCUS_30490	sequence08:294734..294889(+)	partial			WP_000233908.1	hypothetical protein	94.1	21.1	72.9
MGA_3106	LOCUS_30940	sequence08:339380..339790(+)	internal_stop_codon	339794..339796(+),339788..339790(+)		WP_000445335.1	glucose-6-phosphate dehydrogenase	100.0	27.5	52.9
MGA_3137	LOCUS_31250	sequence08:369702..372209(+)	partial			WP_002195688.1	collagen-like protein	24.9	24.9	72.1
MGA_3167	LOCUS_31540	sequence09:15358..15612(-)	frameshift		15304,15591,15688,15660,15374	WP_000215889.1	glycoside hydrolase family 25 protein	90.5	33.5	96.1
MGA_3168	LOCUS_31550	sequence09:15680..15970(-)	frameshift		15688,15660,15591	WP_000215889.1	glycoside hydrolase family 25 protein	97.9	41.4	100.0
MGA_3169	LOCUS_31560	sequence09:15983..16168(-)	frameshift		16173	WP_001207867.1	hypothetical protein	100.0	64.2	100.0
MGA_3170	LOCUS_31570	sequence09:16282..16527(-)	frameshift		16544,16739,16565,16727	WP_000450149.1	hypothetical protein	100.0	12.4	96.3
MGA_3171	LOCUS_31580	sequence09:16737..17060(-)	frameshift		16543,16738,16564,16729,17167	WP_000450149.1	hypothetical protein	100.0	16.4	100.0
MGA_3172	LOCUS_31590	sequence09:17156..17533(-)	frameshift		17608,17166,17535	WP_000450149.1	hypothetical protein	97.6	18.7	99.2
MGA_3173	LOCUS_31600	sequence09:17576..18238(-)	frameshift		17608,17535	WP_000450149.1	hypothetical protein	95.5	32.2	100.0
MGA_3174	LOCUS_31610	sequence09:18243..18815(-)	frameshift		18895	WP_000032648.1	hypothetical protein	100.0	72.0	100.0
MGA_3175	LOCUS_31620	sequence09:18881..19036(-)	frameshift		18895	WP_000032648.1	hypothetical protein	100.0	19.3	94.1
MGA_3176	LOCUS_31630	sequence09:19105..19569(-)	frameshift		19191	WP_011109764.1	D-Ala-D-Ala carboxypeptidase family metallohydrolase	81.8	72.8	95.2
MGA_3177	LOCUS_31640	sequence09:19517..19711(-)	frameshift		19848,19755,19692	WP_011109763.1	glucosaminidase domain-containing protein	95.3	25.1	77.0
MGA_3178	LOCUS_31650	sequence10:50..820(+)	partial			WP_000092667.1	Gly-Xaa-Xaa repeat protein	99.2	27.4	67.3
MGA_3272	LOCUS_32570	sequence11:62399..63130(-)	partial			WP_000584790.1	sensor histidine kinase	100.0	55.5	98.8
MGA_3277	LOCUS_32620	sequence11:67865..68584(+)	partial			WP_000659298.1	anion transporter	100.0	62.4	95.4
MGA_3325	LOCUS_33100	sequence11:123504..123695(-)	partial			WP_000845169.1	serine hydrolase domain-containing protein	77.8	12.7	77.6
MGA_3327	LOCUS_33120	sequence11:124240..124401(-)	partial			WP_017154314.1	IS4 family transposase	96.2	30.5	86.3
MGA_3335	LOCUS_33200	sequence11:133291..133524(-)	partial			WP_033679177.1	DUF3967 domain-containing protein	79.2	35.3	80.3
MGA_3338	LOCUS_33230	sequence11:135840..135983(-)	internal_stop_codon	136020..136022(-)		WP_000833152.1	YxeA family protein	100.0	40.2	78.7
MGA_3339	LOCUS_33240	sequence11:136020..136193(-)	internal_stop_codon	136020..136022(-)		WP_000833152.1	YxeA family protein	100.0	48.7	68.4
MGA_3352	LOCUS_33370	sequence11:151828..152037(-)	frameshift		152096	WP_001048563.1	MarR family winged helix-turn-helix transcriptional regulator	100.0	49.6	100.0
MGA_3353	LOCUS_33380	sequence11:152046..152246(-)	frameshift		152096	WP_001048563.1	MarR family winged helix-turn-helix transcriptional regulator	77.3	36.7	100.0
MGA_3369	LOCUS_33540	sequence11:169771..170655(+)	frameshift		170640	WP_137396889.1	TerD family protein	98.6	41.3	97.2
MGA_3370	LOCUS_33550	sequence11:170693..171883(+)	frameshift		170646	WP_137396889.1	TerD family protein	99.2	55.9	99.2
MGA_3393	LOCUS_33780	sequence11:197886..198221(-)	frameshift,internal_stop_codon	198401..198403(-)	197899,198307	WP_001238651.1	MFS transporter	98.2	27.2	96.3
MGA_3394	LOCUS_33790	sequence11:198592..198879(-)	frameshift,internal_stop_codon	198400..198402(-)	198600	WP_001238651.1	MFS transporter	97.9	23.2	93.5
MGA_3395	LOCUS_33800	sequence11:198850..199182(+)	partial			WP_001033587.1	phosphatidylinositol-specific phospholipase C	88.2	20.6	91.8
MGA_3396	LOCUS_33810	sequence11:199359..199634(-)	partial			WP_073515829.1	lytic polysaccharide monooxygenase	100.0	19.9	94.5
MGA_3399	LOCUS_33840	sequence11:201187..201636(-)	partial			WP_011707227.1	S8 family peptidase	98.0	37.1	36.7
MGA_3445	LOCUS_34300	sequence11:241903..242082(-)	internal_stop_codon	242083..242085(-)		WP_000347045.1	Imm30 family immunity protein	98.3	37.4	89.7
MGA_3447	LOCUS_34320	sequence11:242458..242745(-)	frameshift		242828	WP_000415780.1	hypothetical protein	100.0	54.6	100.0
MGA_3448	LOCUS_34330	sequence11:242811..242981(-)	frameshift		242828	WP_000415780.1	hypothetical protein	92.9	29.9	100.0
MGA_3457	LOCUS_34420	sequence11:246532..246822(-)	frameshift		246950	WP_206782626.1	DNA/RNA non-specific endonuclease	99.0	13.0	94.7
MGA_3458	LOCUS_34430	sequence11:246876..247058(-)	frameshift		246950	WP_206782626.1	DNA/RNA non-specific endonuclease	63.3	5.2	81.6
MGA_3469	LOCUS_34540	sequence11:255340..255762(-)	partial			WP_000883453.1	hypothetical protein	70.0	70.0	92.9
MGA_3478	LOCUS_34630	sequence11:263635..264396(+)	partial			WP_048538240.1	serine hydrolase	89.3	53.9	99.1
MGA_3513	LOCUS_34970	sequence12:3946..4158(-)	frameshift		4153,4166	WP_000121176.1	hypothetical protein	98.6	65.1	98.6
MGA_3518	LOCUS_35020	sequence12:6981..7568(+)	frameshift		7562,7574	WP_001222376.1	flagellin	100.0	71.7	94.9
MGA_3519	LOCUS_35030	sequence12:7648..7797(+)	frameshift		7577,7565	WP_193652655.1	flagellin	100.0	18.1	100.0
MGA_3539	LOCUS_35230	sequence12:23944..24633(-)	frameshift		24773	WP_000929221.1	flagellar hook-associated protein 2	100.0	50.0	99.6
MGA_3540	LOCUS_35240	sequence12:24726..25319(-)	frameshift		24773	WP_000929221.1	flagellar hook-associated protein 2	94.4	40.6	97.8
MGA_3626	LOCUS_36100	sequence12:117267..117929(+)	partial			WP_001283090.1	PBP1A family penicillin-binding protein	90.0	22.1	92.4
MGA_3629	LOCUS_36130	sequence12:119729..121768(+)	partial			WP_001283090.1	PBP1A family penicillin-binding protein	85.0	64.2	90.5
MGA_3678	LOCUS_36620	sequence12:162860..163042(-)	partial			WP_000349103.1	hypothetical protein	100.0	29.6	90.0
MGA_3772	LOCUS_37560	sequence12:248236..248424(-)	frameshift		248435	WP_001249949.1	imidazoleglycerol-phosphate dehydratase HisB	100.0	32.0	98.4
MGA_3773	LOCUS_37570	sequence12:248421..248819(-)	frameshift		248435	WP_001249949.1	imidazoleglycerol-phosphate dehydratase HisB	97.0	66.0	100.0
MGA_3774	LOCUS_37580	sequence12:248819..249688(-)	frameshift		249864	WP_000402931.1	histidinol dehydrogenase	100.0	67.4	100.0
MGA_3775	LOCUS_37590	sequence12:249862..250107(-)	frameshift		249864	WP_000402931.1	histidinol dehydrogenase	100.0	18.9	100.0
MGA_3800	LOCUS_37840	sequence12:272664..272987(-)	partial			WP_000715245.1	transcriptional regulator	100.0	61.0	85.0
MGA_3839	LOCUS_38230	sequence13:106..1425(+)	frameshift,internal_stop_codon	21..23(+)	131,1404,1558	WP_000584284.1	PAS domain S-box protein	96.8	53.1	99.1
MGA_3840	LOCUS_38240	sequence13:1570..1914(+)	frameshift		1404,1558	WP_000584284.1	PAS domain S-box protein	100.0	14.2	96.5
MGA_3841	LOCUS_38250	sequence13:2512..2835(+)	frameshift		2450,2293,3048,2906,2523,2413,2830	WP_000802296.1	spore germination protein	95.3	20.4	100.0
MGA_3842	LOCUS_38260	sequence13:2910..3065(+)	frameshift		2905,2829,3047	WP_000802296.1	spore germination protein	98.0	10.0	92.0
MGA_3843	LOCUS_38270	sequence13:3034..3411(+)	frameshift		3047,2905,3354,3451,3500,2829	WP_000802296.1	spore germination protein	81.6	20.4	96.1
MGA_3844	LOCUS_38280	sequence13:3529..3753(+)	frameshift		3750,3354,3500,3454	WP_000802296.1	spore germination protein	100.0	14.8	86.5
MGA_3845	LOCUS_38290	sequence13:4188..4472(+)	frameshift		3976,4403,3900	WP_000815826.1	GerAB/ArcD/ProY family transporter	98.9	24.2	82.8
MGA_3846	LOCUS_38300	sequence13:4406..4885(+)	frameshift		4403	WP_000809697.1	GerAB/ArcD/ProY family transporter	100.0	44.2	95.0
MGA_3847	LOCUS_38310	sequence13:4888..5505(+)	frameshift		5749,5502	WP_000832874.1	Ger(x)C family spore germination protein	100.0	57.1	100.0
MGA_3848	LOCUS_38320	sequence13:5510..5821(+)	frameshift		5749,5502	WP_000832881.1	Ger(x)C family spore germination protein	97.1	27.9	86.0
MGA_3849	LOCUS_38330	sequence13:5769..5969(+)	frameshift		5755,5502	WP_000832881.1	Ger(x)C family spore germination protein	100.0	18.4	100.0
MGA_3851	LOCUS_38350	sequence13:7396..7635(+)	frameshift		7632,7704,7825	WP_000722298.1	asparaginase	98.7	23.4	100.0
MGA_3852	LOCUS_38360	sequence13:7820..7987(+)	frameshift		7632,7707,7828,7973	WP_000722298.1	asparaginase	89.1	14.7	100.0
MGA_3853	LOCUS_38370	sequence13:8010..8396(+)	frameshift		7827,7972	WP_000722312.1	asparaginase	100.0	38.3	94.5
MGA_3878	LOCUS_38620	sequence13:38988..39305(+)	frameshift		39284	WP_000762272.1	cysteine synthase A	95.2	32.8	100.0
MGA_3879	LOCUS_38630	sequence13:39302..39904(+)	frameshift		39284	WP_000762273.1	cysteine synthase A	100.0	65.6	93.5
MGA_3915	LOCUS_38990	sequence13:75429..75617(+)	frameshift		75599	WP_001046898.1	TIGR04053 family radical SAM/SPASM domain-containing protein	91.9	15.1	96.5
MGA_3935	LOCUS_39190	sequence13:98470..98964(+)	frameshift		98401	WP_000169640.1	TetR/AcrR family transcriptional regulator	100.0	83.7	100.0
MGA_3942	LOCUS_39260	sequence13:104393..104914(+)	frameshift		104848	WP_139368210.1	IS3 family transposase	98.8	37.9	60.2
MGA_3943	LOCUS_39270	sequence13:104941..105750(+)	frameshift		104848	WP_126660861.1	IS3 family transposase	100.0	59.6	85.9
MGA_3951	LOCUS_39350	sequence13:113753..114010(+)	frameshift		113769	WP_000766756.1	DNA topoisomerase III	95.3	11.3	100.0
MGA_3971	LOCUS_39550	sequence13:130300..130608(+)	frameshift,internal_stop_codon	130510..130512(+)	130431	WP_011110010.1	helix-turn-helix transcriptional regulator	43.1	41.9	97.7
MGA_3992	LOCUS_39760	sequence13:146317..146562(+)	frameshift		146318	WP_012048418.1	dUTP diphosphatase	74.1	37.9	41.0
MGA_4034	LOCUS_40180	sequence13:171200..172696(+)	partial			WP_011110097.1	phage tail spike protein	47.6	41.7	30.3
MGA_4052	LOCUS_40360	sequence13:188822..189625(+)	partial			WP_000759455.1	amidase family protein	100.0	49.8	92.5
MGA_4113	LOCUS_40970	sequence13:255010..255270(+)	frameshift		255249	WP_000877687.1	sugar phosphate isomerase/epimerase	94.2	28.9	100.0
MGA_4114	LOCUS_40980	sequence13:255245..255853(+)	frameshift		255249	WP_000877687.1	sugar phosphate isomerase/epimerase	99.5	71.8	99.5
MGA_4159	LOCUS_41430	sequence13:293432..294514(+)	frameshift		294472	WP_000824276.1	peptide ABC transporter substrate-binding protein	96.4	62.7	98.6
MGA_4160	LOCUS_41440	sequence13:294646..295092(+)	frameshift		294472	WP_000824276.1	peptide ABC transporter substrate-binding protein	100.0	26.8	99.3
MGA_4190	LOCUS_41740	sequence13:320637..321191(-)	partial			WP_001245231.1	MFS transporter	100.0	45.4	96.2
MGA_4224	LOCUS_42080	sequence13:354962..355354(+)	frameshift		354984	WP_002195442.1	alpha/beta fold hydrolase	93.8	74.4	100.0
MGA_4225	LOCUS_42090	sequence13:355660..355986(+)	frameshift		355980	WP_156575939.1	hypothetical protein	100.0	50.9	88.0
MGA_4226	LOCUS_42100	sequence13:355965..356297(+)	frameshift		355980	WP_156575939.1	hypothetical protein	97.3	50.5	95.3
MGA_4227	LOCUS_42110	sequence13:356762..356902(+)	frameshift		356884	WP_000267105.1	hypothetical protein	95.7	16.9	97.7
MGA_4228	LOCUS_42120	sequence13:356965..357543(+)	frameshift		356884	WP_000267105.1	hypothetical protein	100.0	73.8	97.4
MGA_4230	LOCUS_42140	sequence13:357645..357935(+)	frameshift		357893,358079	WP_134207673.1	DUF3952 domain-containing protein	86.5	31.1	100.0
MGA_4231	LOCUS_42150	sequence13:357911..358093(+)	frameshift		357893,358079	WP_134207673.1	DUF3952 domain-containing protein	98.3	22.1	96.6
MGA_4232	LOCUS_42160	sequence13:358176..358424(+)	frameshift		357893,358079	WP_134207673.1	DUF3952 domain-containing protein	100.0	30.7	92.7
MGA_4254	LOCUS_42380	sequence13:376855..377202(-)	frameshift		377393	WP_000754999.1	MBL fold metallo-hydrolase	100.0	35.6	90.4
MGA_4255	LOCUS_42390	sequence13:377316..377825(-)	frameshift		377396	WP_000754999.1	MBL fold metallo-hydrolase	90.5	47.4	92.2
MGA_4274	LOCUS_42580	sequence13:398556..398933(+)	partial			WP_071720216.1	STAS/SEC14 domain-containing protein	100.0	74.9	91.2
MGA_4281	LOCUS_42650	sequence13:405634..406527(-)	partial			WP_013390253.1	DUF1524 domain-containing protein	15.5	13.4	80.4
MGA_4288	LOCUS_42720	sequence13:412297..412557(+)	partial			WP_001075358.1	nucleotide pyrophosphohydrolase	74.4	58.2	68.8
MGA_4289	LOCUS_42730	sequence13:412616..412921(+)	partial			WP_138431871.1	AAA family ATPase	99.0	18.4	36.3
MGA_4290	LOCUS_42740	sequence13:413027..413419(+)	internal_stop_codon	413417..413419(+)		WP_051532688.1	DUF3578 domain-containing protein	93.1	34.2	48.8
MGA_4388	LOCUS_43720	sequence13:515601..516350(-)	partial			WP_012257289.1	DUF4397 domain-containing protein	67.5	65.3	39.2
MGA_4468	LOCUS_44520	sequence13:597981..598670(+)	partial			WP_003245267.1	MFS transporter	99.6	53.0	37.7
MGA_4486	LOCUS_44700	sequence13:614430..615239(-)	frameshift		615331	WP_126660861.1	IS3 family transposase	100.0	59.6	85.9
MGA_4487	LOCUS_44710	sequence13:615266..615787(-)	frameshift		615331	WP_139368210.1	IS3 family transposase	98.8	37.9	60.2
MGA_4524	LOCUS_45080	sequence13:646829..647224(-)	partial			WP_000639392.1	collagen-like triple helix repeat-containing protein	100.0	65.2	97.7
MGA_4526	LOCUS_45100	sequence13:647651..648490(+)	partial			WP_011110088.1	DUF4183 domain-containing protein	31.9	31.9	100.0
MGA_4527	LOCUS_45110	sequence13:649049..650254(+)	partial			WP_000203317.1	exosporium glycoprotein BclB-related protein	41.4	41.4	97.6
MGA_4561	LOCUS_45450	sequence13:678649..678963(+)	frameshift,internal_stop_codon	678549..678551(+),678963..678965(+)	678400,678620,678436	WP_178939948.1	FtsX-like permease family protein	100.0	13.4	80.8
MGA_4562	LOCUS_45460	sequence13:679121..679348(+)	frameshift,internal_stop_codon	679109..679111(+)	679264	WP_212090789.1	nucleoside triphosphate pyrophosphohydrolase family protein	70.7	35.1	81.1
MGA_4563	LOCUS_45470	sequence13:679363..679503(+)	frameshift,internal_stop_codon	679109..679111(+)	679264	WP_212090789.1	nucleoside triphosphate pyrophosphohydrolase family protein	100.0	30.5	82.6
MGA_4617	LOCUS_46000	sequence13:754938..756656(+)	partial			WP_001038995.1	collagenase ColA	99.8	59.5	94.6
MGA_4633	LOCUS_46160	sequence13:774760..775617(+)	frameshift		775467	WP_000397283.1	acyl-CoA dehydrogenase	85.3	63.5	96.3
MGA_4634	LOCUS_46170	sequence13:775506..775904(+)	frameshift		775467	WP_000397283.1	acyl-CoA dehydrogenase	100.0	34.6	98.5
MGA_4641	LOCUS_46240	sequence13:783069..783590(+)	frameshift		783524	WP_139368210.1	IS3 family transposase	98.8	37.9	60.2
MGA_4642	LOCUS_46250	sequence13:783617..784426(+)	frameshift		783524	WP_126660861.1	IS3 family transposase	100.0	59.6	85.9
MGA_4652	LOCUS_46350	sequence13:792427..792591(+)	frameshift,internal_stop_codon	792815..792817(+),792731..792733(+),792797..792799(+)	792585,792775	WP_043321894.1	DUF3885 domain-containing protein	100.0	24.1	94.4
MGA_4653	LOCUS_46360	sequence13:793000..793131(+)	frameshift,internal_stop_codon	792815..792817(+),792731..792733(+),792797..792799(+)	792772	WP_001176112.1	DUF3885 domain-containing protein	100.0	19.2	95.3
MGA_4659	LOCUS_46420	sequence13:800329..800472(+)	frameshift		800451	WP_000719303.1	LPXTG cell wall anchor domain-containing protein	89.4	7.6	95.2
MGA_4660	LOCUS_46430	sequence13:800511..801218(+)	frameshift		801393,800451,801213,801246	WP_000719303.1	LPXTG cell wall anchor domain-containing protein	99.6	42.3	99.6
MGA_4661	LOCUS_46440	sequence13:801250..801396(+)	frameshift		801392,801641,801212,801245	WP_000719303.1	LPXTG cell wall anchor domain-containing protein	97.9	8.5	87.2
MGA_4662	LOCUS_46450	sequence13:801417..801644(+)	frameshift		801392,801641,801212,801245	WP_000719303.1	LPXTG cell wall anchor domain-containing protein	100.0	13.6	98.7
MGA_4677	LOCUS_46600	sequence13:817705..818031(-)	partial			WP_001037115.1	phosphotransferase	96.3	33.0	91.3
MGA_4729	LOCUS_47120	sequence13:860633..861508(-)	frameshift		861738,861756,861666	WP_000343919.1	collagen-like protein	100.0	54.3	99.0
MGA_4732	LOCUS_47150	sequence13:862976..863674(-)	partial			WP_215553274.1	collagen-like protein	63.4	45.9	85.7
MGA_4777	LOCUS_47600	sequence13:899142..899411(+)	partial			WP_003292590.1	cytochrome P450	79.8	18.2	95.8
MGA_4780	LOCUS_47630	sequence13:901214..901501(+)	partial			WP_000157990.1	cytochrome P450	98.9	23.3	89.4
MGA_4784	LOCUS_47670	sequence13:905690..907390(+)	frameshift		907372	WP_000743777.1	penicillin-binding protein 2	99.1	79.2	100.0
MGA_4785	LOCUS_47680	sequence13:907429..907815(+)	frameshift		907369	WP_000743777.1	penicillin-binding protein 2	100.0	18.1	100.0
MGA_4789	LOCUS_47720	sequence13:911049..911312(+)	partial			WP_001038204.1	ECF-type riboflavin transporter substrate-binding protein	87.4	41.8	94.7
MGA_4800	LOCUS_47830	sequence13:923249..924046(+)	frameshift		923114	WP_006095218.1	cytochrome P450	100.0	64.6	74.7
MGA_4801	LOCUS_47840	sequence13:924358..925245(-)	partial			WP_000459802.1	collagen-like protein	57.6	57.6	100.0
MGA_4811	LOCUS_47940	sequence13:948966..949235(+)	frameshift		949223	WP_001995883.1	DUF1572 family protein	98.9	51.8	94.3
MGA_4813	LOCUS_47960	sequence13:950599..951618(-)	partial			WP_001097733.1	group II intron reverse transcriptase/maturase	100.0	61.9	99.7
MGA_4821	LOCUS_48040	sequence13:959010..959333(+)	partial			WP_001081092.1	ECF-type riboflavin transporter substrate-binding protein	98.1	57.7	87.6
MGA_4829	LOCUS_48120	sequence13:967338..969044(+)	frameshift		969032	WP_001170947.1	penicillin-binding protein	99.5	79.4	100.0
MGA_4830	LOCUS_48130	sequence13:969055..969477(+)	frameshift		969029	WP_001170947.1	penicillin-binding protein	100.0	19.7	96.4
MGA_4837	LOCUS_48200	sequence13:975514..975906(-)	frameshift		975555	WP_000684454.1	DJ-1/PfpI family protein	92.3	63.2	87.5
MGA_4873	LOCUS_48560	sequence13:1009770..1010045(-)	frameshift		1009858,1010053	WP_000691552.1	GNAT family N-acetyltransferase	78.0	45.2	81.7
MGA_4874	LOCUS_48570	sequence13:1010051..1010296(-)	frameshift		1009858,1010053	WP_000691552.1	GNAT family N-acetyltransferase	100.0	51.6	74.1
MGA_4897	LOCUS_48800	sequence13:1026548..1026856(-)	frameshift		1026990	WP_000751387.1	serine hydrolase domain-containing protein	100.0	21.2	85.3
MGA_4898	LOCUS_48810	sequence13:1026955..1027995(-)	frameshift		1026990	WP_000751387.1	serine hydrolase domain-containing protein	96.8	69.5	98.5
MGA_4900	LOCUS_48830	sequence13:1029451..1029630(+)	frameshift		1029600	WP_001167131.1	DinB family protein	86.4	28.7	100.0
MGA_4901	LOCUS_48840	sequence13:1029669..1029986(+)	frameshift		1029600	WP_001167131.1	DinB family protein	100.0	59.0	100.0
MGA_4903	LOCUS_48860	sequence13:1031253..1031477(+)	frameshift		1031631,1031197,1031423	WP_000577694.1	alpha/beta hydrolase family protein	100.0	21.6	78.4
MGA_4904	LOCUS_48870	sequence13:1031446..1031637(+)	frameshift		1031631,1031845,1031197,1031423	WP_000577694.1	alpha/beta hydrolase family protein	98.4	18.6	100.0
MGA_4905	LOCUS_48880	sequence13:1031690..1031851(+)	frameshift		1031631,1031845,1031423	WP_000577694.1	alpha/beta hydrolase family protein	100.0	15.9	98.1
MGA_4927	LOCUS_49100	sequence13:1055708..1055986(-)	frameshift		1056204	WP_000650958.1	Pr6Pr family membrane protein	100.0	44.4	96.7
MGA_4928	LOCUS_49110	sequence13:1056178..1056330(-)	frameshift		1056204	WP_000650958.1	Pr6Pr family membrane protein	84.0	20.3	92.9
MGA_4956	LOCUS_49390	sequence13:1078586..1078885(-)	frameshift		1078588	WP_000701199.1	NUDIX domain-containing protein	91.9	62.8	90.1
MGA_4976	LOCUS_49590	sequence13:1093834..1093977(-)	internal_stop_codon	1093834..1093836(-)		WP_000288935.1	GNAT family N-acetyltransferase	100.0	35.1	85.1
MGA_4991	LOCUS_49740	sequence13:1108147..1108665(+)	frameshift		1108599	WP_163262052.1	IS3 family transposase	98.8	38.1	91.9
MGA_4992	LOCUS_49750	sequence13:1108704..1109501(+)	frameshift		1108608	WP_085959128.1	IS3 family transposase	100.0	58.8	95.5
MGA_4998	LOCUS_49810	sequence13:1113163..1113297(-)	internal_stop_codon	1113149..1113151(-)		WP_000481350.1	M3 family oligoendopeptidase	88.6	7.1	71.8
MGA_5023	LOCUS_50060	sequence13:1134960..1135391(-)	frameshift		1135488,1135380	WP_000755419.1	C40 family peptidase	97.9	42.0	100.0
MGA_5024	LOCUS_50070	sequence13:1135441..1135959(-)	frameshift		1135488,1135380	WP_000755419.1	C40 family peptidase	94.8	48.9	93.9
MGA_5043	LOCUS_50260	sequence13:1151118..1151777(-)	frameshift		1151800	WP_001079707.1	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	100.0	47.7	92.2
MGA_5044	LOCUS_50270	sequence13:1151780..1152493(-)	frameshift		1151800	WP_001079707.1	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	99.2	51.2	86.0
MGA_5131	LOCUS_51140	sequence13:1231586..1231798(-)	partial			WP_000387607.1	YfzA family protein	98.6	68.3	87.0
MGA_5133	LOCUS_51160	sequence13:1232689..1232979(-)	partial			WP_060852018.1	hypothetical protein	99.0	42.4	94.7
MGA_5134	LOCUS_51170	sequence13:1233135..1233353(-)	partial			WP_000755665.1	cell wall-binding protein EntB	100.0	13.7	100.0
MGA_5135	LOCUS_51180	sequence13:1233991..1234809(-)	frameshift		1234008,1234005,1233999	WP_211477706.1	cell wall-binding protein EntB	76.1	38.8	71.5
MGA_5138	LOCUS_51210	sequence13:1236759..1237022(+)	frameshift		1237013	WP_001090913.1	hypothetical protein	100.0	54.4	97.7
MGA_5231	LOCUS_52130	sequence14:21171..21362(-)	frameshift		21372,21375	WP_001227563.1	YoqO family protein	100.0	52.1	76.2
MGA_5234	LOCUS_52160	sequence14:23694..23852(+)	partial			WP_000575809.1	HAD family hydrolase	100.0	23.1	100.0
MGA_5377	LOCUS_53590	sequence14:161086..161379(+)	partial			WP_000567993.1	AAA family ATPase	100.0	38.8	100.0
MGA_5459	LOCUS_54400	sequence15:6747..7085(+)	partial			WP_071740389.1	RNA polymerase sigma factor	100.0	69.1	100.0
MGA_5510	LOCUS_54910	sequence15:52043..52735(-)	frameshift		52746	WP_000502472.1	MFS transporter	100.0	54.5	97.4
MGA_5511	LOCUS_54920	sequence15:52744..53310(-)	frameshift		52746	WP_000502472.1	MFS transporter	100.0	44.5	98.4