{ "type": "genome", "identifier": "GCF_900445435.1", "organism": "Bacillus tequilensis", "title": "Bacillus tequilensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "SC", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900445435.1", "bioproject": "PRJNA224116", "biosample": "SAMEA104318175", "wgs_master": "UAQB00000000.1", "refseq_category": "na", "taxid": "227866", "species_taxid": "227866", "organism_name": "Bacillus tequilensis", "infraspecific_name": "strain=NCTC13306", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/06/29", "asm_name": "59178_C01", "asm_submitter": "SC", "gbrs_paired_asm": "GCA_900445435.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/445/435/GCF_900445435.1_59178_C01", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3697361", "genome_size_ungapped": "3697361", "gc_percent": "44.000000", "replicon_count": "0", "scaffold_count": "63", "contig_count": "63", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900445435.1-RS_2024_08_15", "annotation_date": "2024-08-15", "total_gene_count": "3957", "protein_coding_gene_count": "3608", "non_coding_gene_count": "119", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-06-29", "dateModified": "2018-06-29", "datePublished": "2018-06-29", "_annotation": { "sample_count": 1, "sample_organism": [ "Bacillus tequilensis" ], "sample_taxid": [ "227866" ], "sample_host_organism": [ "not available" ], "sample_host_organism_id": [], "sample_host_disease": [ "not available: to be reported later" ], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "1.050 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 83.33, "contamination": 8.8, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3697361", "Number of Sequences": "63", "Longest Sequences (bp)": "269770", "N50 (bp)": "117667", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "44.0", "Number of CDSs": "3764", "Average Protein Length": "276.4", "Coding Ratio (%)": "84.4", "Number of rRNAs": "29", "Number of tRNAs": "84", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Bacillus tequilensis", "strain": "strain=NCTC13306", "accession": "GCA_900445435.1", "taxid": 227866, "species_taxid": 227866, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1192, "total_fragments": 1200, "ani_threshold": 95, "status": "conclusive" }, { 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