# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_17	LOCUS_00160	sequence01:16111..16689(-)	frameshift		16817	WP_015444411.1	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	99.0	29.1	55.8
MGA_18	LOCUS_00170	sequence01:16758..18065(-)	frameshift		16817	WP_015444411.1	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	97.2	64.7	73.8
MGA_20	LOCUS_00190	sequence01:18897..19316(-)	frameshift		19429	WP_010947553.1	carboxyl transferase domain-containing protein	100.0	26.0	84.2
MGA_21	LOCUS_00200	sequence01:19334..19810(-)	frameshift		19428,19854	WP_010947553.1	carboxyl transferase domain-containing protein	80.4	23.7	75.6
MGA_22	LOCUS_00210	sequence01:19849..20502(-)	frameshift		19857	WP_010947553.1	carboxyl transferase domain-containing protein	99.5	40.4	75.0
MGA_24	LOCUS_00230	sequence01:20922..21131(-)	frameshift		21163	WP_010947551.1	acetyl-CoA C-acyltransferase	100.0	17.5	81.2
MGA_25	LOCUS_00240	sequence01:21137..22105(-)	frameshift		21163	WP_010947551.1	acetyl-CoA C-acyltransferase	98.4	80.5	78.9
MGA_56	LOCUS_00550	sequence01:56500..57471(-)	partial			WP_010946445.1	DotI/IcmL family type IV secretion protein	51.4	51.9	59.0
MGA_62	LOCUS_00610	sequence01:63605..64189(-)	partial			WP_003739396.1	phosphatase PAP2 family protein	82.5	72.3	29.8
MGA_103	LOCUS_01020	sequence01:110439..111299(-)	partial			WP_010947889.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	94.8	34.5	33.9
MGA_113	LOCUS_01120	sequence01:122989..124146(+)	partial			WP_002286261.1	ATP-dependent helicase	89.9	55.1	26.0
MGA_117	LOCUS_01160	sequence01:127785..128024(-)	partial			WP_001279278.1	helix-turn-helix transcriptional regulator	74.7	49.6	44.1
MGA_122	LOCUS_01210	sequence01:130265..131872(-)	partial			WP_010887175.1	DUF3987 domain-containing protein	73.6	46.5	29.4
MGA_130	LOCUS_01280	sequence01:136524..137270(+)	partial			WP_003020345.1	hypothetical protein	73.4	68.4	39.5
MGA_132	LOCUS_01300	sequence01:138910..139095(-)	partial			WP_010948119.1	DUF1328 domain-containing protein	52.5	50.8	90.6
MGA_136	LOCUS_01340	sequence01:140916..141992(-)	partial			WP_015444804.1	GNAT family N-acetyltransferase	46.4	48.1	47.3
MGA_147	LOCUS_01450	sequence01:155024..155170(+)	frameshift		155009	WP_010946546.1	helix-hairpin-helix domain-containing protein	97.9	44.8	48.9
MGA_154	LOCUS_01520	sequence01:163873..164886(+)	partial			WP_012582875.1	HD-GYP domain-containing protein	70.3	58.9	39.1
MGA_188	LOCUS_01860	sequence01:199389..199796(-)	frameshift		199798	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_190	LOCUS_01880	sequence01:200965..201684(-)	partial			WP_010204183.1	carbonic anhydrase	63.2	66.9	32.9
MGA_208	LOCUS_02060	sequence01:217643..217786(+)	partial			WP_164925630.1	IS3-like element ISSod2 family transposase	97.9	12.8	80.4
MGA_210	LOCUS_02080	sequence01:219362..219538(+)	frameshift		219641,219532,219614	WP_164925630.1	IS3-like element ISSod2 family transposase	98.3	15.9	80.7
MGA_211	LOCUS_02090	sequence01:219905..220312(+)	frameshift		219640,220235,219899	WP_164925630.1	IS3-like element ISSod2 family transposase	81.5	30.7	61.8
MGA_212	LOCUS_02100	sequence01:220457..220624(-)	partial			WP_013531559.1	hypothetical protein	85.5	44.8	74.5
MGA_223	LOCUS_02210	sequence02:73..6372(+)	frameshift		6357,6630,6360,92	WP_011707240.1	retention module-containing protein	99.2	40.6	43.6
MGA_225	LOCUS_02230	sequence02:6748..7158(+)	frameshift,internal_stop_codon	7156..7158(+)	7125,7127,7136,7137,7138,7139,6629,6632,6635,6704,6706,6707,7157,6710,7164,7103	WP_011073846.1	VCBS domain-containing protein	95.6	2.6	55.3
MGA_226	LOCUS_02240	sequence02:7112..8617(+)	frameshift		7137,8542	WP_011707240.1	retention module-containing protein	91.6	9.0	43.3
MGA_227	LOCUS_02250	sequence02:8689..9045(+)	frameshift		9036,9037,8524,9039,9040,8530,8533,8536,8539,8542	WP_011073846.1	VCBS domain-containing protein	98.3	2.3	59.3
MGA_232	LOCUS_02290	sequence03:4707..5900(-)	frameshift		4733	WP_115176064.1	hypothetical protein	99.0	83.6	94.1
MGA_237	LOCUS_02340	sequence03:13180..20574(-)	partial			WP_010948516.1	Dot/Icm T4SS effector SidH	30.5	33.2	40.9
MGA_252	LOCUS_02490	sequence03:33390..34643(+)	frameshift		34502	WP_010946277.1	succinate dehydrogenase flavoprotein subunit	89.0	63.0	91.6
MGA_253	LOCUS_02500	sequence03:34649..35158(+)	frameshift		34505	WP_010946277.1	succinate dehydrogenase flavoprotein subunit	100.0	28.7	80.5
MGA_267	LOCUS_02640	sequence03:49788..50390(-)	frameshift		50404	WP_010946290.1	ribose-phosphate pyrophosphokinase	100.0	63.5	85.5
MGA_268	LOCUS_02650	sequence03:50399..50734(-)	frameshift		50401	WP_010946290.1	ribose-phosphate pyrophosphokinase	100.0	35.2	93.7
MGA_289	LOCUS_02860	sequence03:74292..74537(+)	frameshift		74519	WP_016357031.1	UDP-N-acetylmuramate dehydrogenase	75.3	19.8	77.0
MGA_290	LOCUS_02870	sequence03:74534..75208(+)	frameshift		75203,74519	WP_016357031.1	UDP-N-acetylmuramate dehydrogenase	99.6	72.1	75.8
MGA_313	LOCUS_03100	sequence03:96180..97067(-)	frameshift		95998,96191	WP_010948297.1	DNA-processing protein DprA	98.6	80.9	60.3
MGA_322	LOCUS_03190	sequence03:103935..104360(-)	partial			WP_001255411.1	EamA family transporter	95.0	42.9	25.2
MGA_326	LOCUS_03230	sequence03:107332..107739(+)	frameshift		107329	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_330	LOCUS_03270	sequence03:110700..111587(-)	frameshift		111616	WP_010948282.1	flagellar hook-length control protein FliK	100.0	74.7	34.2
MGA_331	LOCUS_03280	sequence03:111605..111880(-)	frameshift		111616	WP_010948282.1	flagellar hook-length control protein FliK	98.9	23.2	56.7
MGA_340	LOCUS_03370	sequence03:123567..124004(-)	frameshift		123883,123911	WP_014843644.1	hypothetical protein	99.3	52.5	27.7
MGA_342	LOCUS_03390	sequence03:125476..125637(-)	partial			WP_010948266.1	protein LvrA	81.1	32.6	67.4
MGA_360	LOCUS_03570	sequence03:144249..144851(-)	partial			WP_010929870.1	TIGR00730 family Rossman fold protein	66.5	67.7	41.4
MGA_367	LOCUS_03640	sequence03:150856..151254(+)	partial			WP_126322482.1	response regulator	87.9	16.8	35.9
MGA_383	LOCUS_03800	sequence03:163621..164661(-)	partial			WP_003380033.1	carbonic anhydrase	52.0	74.4	41.5
MGA_386	LOCUS_03830	sequence03:166964..167845(-)	partial			WP_003899979.1	bifunctional GNAT family N-acetyltransferase/aminoglycoside 3'-phosphotransferase/choline kinase family protein	99.3	61.2	45.4
MGA_389	LOCUS_03860	sequence03:169842..170600(+)	partial			WP_010948208.1	HAMP domain-containing sensor histidine kinase	100.0	60.2	56.5
MGA_390	LOCUS_03870	sequence03:170966..172528(-)	partial			WP_010948684.1	lpg3000 family Dot/Icm T4SS effector	46.7	40.2	32.4
MGA_413	LOCUS_04100	sequence03:198223..198789(+)	frameshift		198756	WP_010948202.1	carbonic anhydrase	80.9	61.6	69.7
MGA_414	LOCUS_04110	sequence03:198816..198971(+)	frameshift		198756	WP_010948202.1	carbonic anhydrase	92.2	19.2	70.2
MGA_428	LOCUS_04240	sequence04:4259..4750(-)	frameshift		4806	WP_010947038.1	cysteine--tRNA ligase	100.0	36.0	66.5
MGA_429	LOCUS_04250	sequence04:4744..6675(-)	frameshift		6864,6654,6807	WP_010947037.1	glutamine--tRNA ligase/YqeY domain fusion protein	53.3	62.3	79.0
MGA_430	LOCUS_04260	sequence04:6618..6809(-)	frameshift		6864,6654,6807	WP_010947037.1	glutamine--tRNA ligase/YqeY domain fusion protein	81.0	9.3	86.3
MGA_431	LOCUS_04270	sequence04:6796..7095(-)	frameshift		7104,7251,6804,7131,6651,6861	WP_010947037.1	glutamine--tRNA ligase/YqeY domain fusion protein	81.8	14.7	77.8
MGA_445	LOCUS_04380	sequence06:2412..2672(-)	partial			WP_010971266.1	type II toxin-antitoxin system RelB/DinJ family antitoxin	76.7	72.5	43.9
MGA_467	LOCUS_04580	sequence08:11280..12251(+)	frameshift		12182	WP_011390877.1	ABC transporter permease	95.4	81.5	51.9
MGA_468	LOCUS_04590	sequence08:12227..12412(+)	frameshift		12182	WP_011390877.1	ABC transporter permease	100.0	16.1	65.6
MGA_478	LOCUS_04680	sequence09:4656..7283(-)	partial			WP_011458930.1	NHLP bacteriocin export ABC transporter permease/ATPase subunit	74.3	70.0	40.0
MGA_480	LOCUS_04700	sequence09:9461..10708(-)	partial			WP_005814912.1	NHLP bacteriocin system secretion protein	42.2	57.1	37.1
MGA_485	LOCUS_04750	sequence09:13335..14144(-)	frameshift		14161	WP_050070678.1	KUP/HAK/KT family potassium transporter	100.0	42.9	65.8
MGA_486	LOCUS_04760	sequence09:14141..>15011(-)	frameshift		14161	WP_050070678.1	KUP/HAK/KT family potassium transporter	98.6	45.7	63.2
MGA_490	LOCUS_04790	sequence10:1443..1931(+)	frameshift		1601,1547,1899	WP_000027427.1	ISAs1-like element ISEc26 family transposase	95.7	39.5	34.8
MGA_491	LOCUS_04800	sequence10:1907..2554(+)	frameshift		1898	WP_011072192.1	ISAs1-like element ISSod22 family transposase	94.4	52.8	33.5
MGA_493	LOCUS_04820	sequence10:3518..4003(-)	frameshift		3520,3947,3990	WP_011072192.1	ISAs1-like element ISSod22 family transposase	86.3	37.0	41.0
MGA_506	LOCUS_04950	sequence11:17093..18130(-)	frameshift		18132	WP_010947064.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	100.0	77.2	85.2
MGA_507	LOCUS_04960	sequence11:18121..18423(-)	frameshift		18132	WP_010947064.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	97.0	21.7	87.6
MGA_527	LOCUS_05160	sequence11:44855..45073(+)	frameshift		45061	WP_010947151.1	LapA family protein	100.0	75.0	72.2
MGA_535	LOCUS_05240	sequence12:159..518(+)	partial			WP_011104442.1	IS66 family transposase	98.3	23.3	44.4
MGA_541	LOCUS_05300	sequence12:3874..4260(-)	partial			WP_010946157.1	disulfide bond formation protein B	97.7	68.1	50.4
MGA_542	LOCUS_05310	sequence12:4707..6314(-)	partial			WP_004544143.1	FAD-dependent monooxygenase	75.7	74.5	35.5
MGA_543	LOCUS_05320	sequence12:6401..6940(-)	partial			WP_010947882.1	GNAT family N-acetyltransferase	94.4	50.6	50.9
MGA_567	LOCUS_05560	sequence12:36804..37358(+)	frameshift		37265	WP_027268647.1	4Fe-4S dicluster domain-containing protein	73.9	35.9	69.9
MGA_568	LOCUS_05570	sequence12:37358..37936(+)	frameshift		37265	WP_027268647.1	4Fe-4S dicluster domain-containing protein	99.0	50.1	71.6
MGA_575	LOCUS_05640	sequence12:43509..44861(+)	partial			WP_003410178.1	erythromycin esterase family protein	92.9	61.8	49.5
MGA_576	LOCUS_05650	sequence12:45016..45666(+)	frameshift		45660	WP_162494048.1	aminoglycoside 3'-phosphotransferase/choline kinase family protein	82.9	55.1	38.5
MGA_577	LOCUS_05660	sequence12:45723..45977(+)	frameshift		45663	WP_162494048.1	aminoglycoside 3'-phosphotransferase/choline kinase family protein	95.2	24.0	46.2
MGA_593	LOCUS_05820	sequence12:63829..64236(-)	frameshift		64238	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_594	LOCUS_05830	sequence12:64739..65005(+)	partial			WP_015704536.1	transposase	40.9	22.1	66.7
MGA_603	LOCUS_05920	sequence12:72536..73333(-)	partial			WP_010948062.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	77.4	73.6	62.4
MGA_613	LOCUS_06020	sequence13:648..983(-)	partial			WP_010946590.1	hypothetical protein	36.0	43.0	70.0
MGA_626	LOCUS_06150	sequence13:11146..11550(-)	frameshift		11181	WP_010946603.1	DNA helicase RecQ	45.5	10.0	73.8
MGA_659	LOCUS_06480	sequence13:55770..57743(+)	partial			WP_010945991.1	diguanylate cyclase	54.9	50.5	40.5
MGA_660	LOCUS_06490	sequence13:58164..59498(-)	partial			WP_016357011.1	serine hydrolase domain-containing protein	72.1	62.3	43.2
MGA_665	LOCUS_06540	sequence13:62592..65975(+)	partial			WP_010948516.1	Dot/Icm T4SS effector SidH	71.1	35.5	25.7
MGA_666	LOCUS_06550	sequence13:66169..68229(+)	partial			WP_010948516.1	Dot/Icm T4SS effector SidH	25.9	8.0	27.6
MGA_675	LOCUS_06640	sequence13:76053..76634(-)	partial			WP_010918386.1	RDD family protein	70.5	50.3	34.2
MGA_684	LOCUS_06730	sequence13:84094..84459(+)	partial			WP_014843422.1	phasin family protein	66.9	82.5	43.2
MGA_704	LOCUS_06930	sequence13:100989..101168(+)	frameshift,internal_stop_codon	101183..101185(+)	100972	WP_019213468.1	IS6 family transposase	100.0	25.1	57.6
MGA_725	LOCUS_07140	sequence13:123278..123685(-)	frameshift		123687	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_745	LOCUS_07340	sequence13:145586..145993(+)	frameshift		145583	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_774	LOCUS_07630	sequence13:175618..176436(+)	partial			WP_011969806.1	response regulator	28.7	26.2	38.3
MGA_788	LOCUS_07770	sequence13:188793..189401(+)	partial			WP_010948033.1	lpg2327 family Dot/Icm T4SS effector	68.3	47.5	37.6
MGA_798	LOCUS_07870	sequence13:200073..208667(-)	partial			WP_002858134.1	preprotein translocase subunit SecA	18.3	59.3	23.4
MGA_814	LOCUS_08030	sequence13:220549..220977(-)	frameshift,internal_stop_codon	220585..220587(-),220609..220611(-)	220617	WP_016357024.1	hypothetical protein	84.5	75.0	31.8
MGA_825	LOCUS_08140	sequence13:230361..230657(-)	partial			WP_011036977.1	YerC/YecD family TrpR-related protein	76.5	69.4	61.3
MGA_827	LOCUS_08160	sequence13:231484..232089(+)	frameshift		231439	WP_010946640.1	SDR family NAD(P)-dependent oxidoreductase	99.0	80.6	80.4
MGA_846	LOCUS_08350	sequence13:253048..253281(-)	partial			WP_010946893.1	DMT family transporter	90.9	20.3	47.1
MGA_854	LOCUS_08430	sequence13:262921..264141(-)	partial			WP_011391417.1	YbaL family putative K(+) efflux transporter	96.3	67.9	58.3
MGA_877	LOCUS_08660	sequence13:289350..290234(-)	partial			WP_010945862.1	outer membrane beta-barrel protein	62.2	73.8	32.1
MGA_878	LOCUS_08670	sequence13:290418..291167(-)	partial			WP_002024365.1	sulfite exporter TauE/SafE family protein	94.8	67.0	37.8
MGA_881	LOCUS_08700	sequence13:292528..294684(+)	partial			WP_010948192.1	Dot/Icm T4SS GTPase-activating effector LepB	90.5	51.7	37.2
MGA_887	LOCUS_08760	sequence13:300106..300513(+)	frameshift		300103	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_889	LOCUS_08780	sequence13:301502..303691(+)	partial			WP_012257646.1	clostripain-related cysteine peptidase	48.0	34.2	28.6
MGA_903	LOCUS_08920	sequence13:317583..317930(-)	frameshift		317956	WP_015444203.1	hypothetical protein	94.8	76.8	51.4
MGA_916	LOCUS_09050	sequence13:330983..331897(-)	partial			WP_173509797.1	GNAT family N-acetyltransferase	42.4	77.8	28.8
MGA_922	LOCUS_09110	sequence13:337326..338132(+)	partial			WP_010888338.1	3'(2'),5'-bisphosphate nucleotidase CysQ	87.7	66.6	35.7
MGA_927	LOCUS_09160	sequence13:340799..341557(+)	frameshift		341509	WP_015444932.1	hypothetical protein	91.3	81.5	42.2
MGA_929	LOCUS_09180	sequence13:341916..342821(+)	partial			WP_010948112.1	hypothetical protein	54.8	65.8	28.7
MGA_939	LOCUS_09280	sequence13:357501..358715(-)	frameshift		358768	WP_003114318.1	transporter substrate-binding domain-containing protein	90.6	30.0	31.2
MGA_940	LOCUS_09290	sequence13:358709..359986(-)	partial			WP_012660540.1	protein-glutamate O-methyltransferase CheR	64.7	57.8	37.4
MGA_947	LOCUS_09340	sequence14:314..904(+)	frameshift		482,963,551,295,939,172,849,951,891,1053	WP_011104442.1	IS66 family transposase	88.3	34.4	36.7
MGA_948	LOCUS_09350	sequence14:1229..1588(+)	frameshift		1046	WP_011104442.1	IS66 family transposase	98.3	23.3	44.4
MGA_955	LOCUS_09410	sequence15:1627..2316(+)	frameshift		2220	WP_011056358.1	TIGR00300 family protein	81.7	26.6	42.9
MGA_956	LOCUS_09420	sequence15:2604..3068(+)	partial			WP_010946963.1	translesion error-prone DNA polymerase V autoproteolytic subunit	81.2	74.4	56.8
MGA_960	LOCUS_09460	sequence15:5810..6028(-)	partial			WP_012259539.1	DUF4160 domain-containing protein	83.3	72.6	45.9
MGA_967	LOCUS_09530	sequence15:12512..13105(-)	partial			WP_011105416.1	IS66-like element ISPsy5 family transposase	97.0	36.9	42.5
MGA_969	LOCUS_09550	sequence15:14463..15446(-)	partial			WP_011104442.1	IS66 family transposase	82.3	53.9	40.3
MGA_977	LOCUS_09630	sequence15:19845..21119(-)	partial			WP_093649644.1	ISL3 family transposase	88.2	58.7	21.4
MGA_986	LOCUS_09720	sequence15:32114..33388(-)	partial			WP_093649644.1	ISL3 family transposase	88.2	58.7	21.4
MGA_991	LOCUS_09770	sequence15:36035..36346(-)	frameshift		36408	WP_011084489.1	IS6-like element ISBj7 family transposase	92.2	37.2	45.4
MGA_992	LOCUS_09780	sequence15:36373..36741(-)	frameshift		36405	WP_011142671.1	IS6 family transposase	90.2	46.6	52.7
MGA_995	LOCUS_09810	sequence15:41128..42402(+)	frameshift		42369	WP_093649644.1	ISL3 family transposase	88.2	58.7	21.4
MGA_1008	LOCUS_09940	sequence15:56643..57116(+)	partial			WP_011946663.1	translesion error-prone DNA polymerase V autoproteolytic subunit	82.2	74.7	56.9
MGA_1011	LOCUS_09970	sequence15:59014..59691(+)	partial			WP_010946998.1	SAM-dependent methyltransferase	91.1	74.4	29.5
MGA_1029	LOCUS_10150	sequence15:72081..72950(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	95.2	72.9	32.4
MGA_1036	LOCUS_10220	sequence15:77391..78164(-)	partial			WP_035887216.1	DUF1566 domain-containing protein	66.5	66.0	50.9
MGA_1037	LOCUS_10230	sequence15:78314..79474(-)	partial			WP_010774229.1	DEAD/DEAH box helicase family protein	88.6	11.1	30.1
MGA_1079	LOCUS_10650	sequence15:111575..113350(-)	partial			WP_011861398.1	HAMP domain-containing sensor histidine kinase	35.9	46.7	28.4
MGA_1086	LOCUS_10710	sequence16:202..441(-)	frameshift		237	WP_032802668.1	IscS subfamily cysteine desulfurase	86.1	17.7	66.2
MGA_1093	LOCUS_10780	sequence16:5191..5541(-)	partial			WP_001083605.1	response regulator	86.2	43.0	40.2
MGA_1095	LOCUS_10800	sequence16:7535..8026(-)	partial			WP_010978523.1	6-pyruvoyl tetrahydropterin synthase family protein	63.8	76.3	34.5
MGA_1151	LOCUS_11340	sequence17:17099..18952(-)	partial			WP_010947674.1	Dot/Icm T4SS effector LegL5	66.5	75.6	40.5
MGA_1155	LOCUS_11380	sequence17:23447..25096(-)	partial			WP_000089239.1	ankyrin repeat domain-containing protein	48.1	73.2	27.2
MGA_1162	LOCUS_11450	sequence17:31538..32617(+)	frameshift		32386	WP_011028362.1	MMPL family transporter	67.1	32.8	26.2
MGA_1163	LOCUS_11460	sequence17:32695..33768(+)	partial			WP_000856434.1	MMPL family transporter	96.9	46.3	33.0
MGA_1164	LOCUS_11470	sequence17:33816..37085(+)	partial			WP_011971042.1	non-ribosomal peptide synthetase	73.4	9.1	35.0
MGA_1176	LOCUS_11590	sequence17:47323..48357(+)	partial			WP_005176271.1	Trk system potassium transporter TrkH	100.0	71.2	49.1
MGA_1179	LOCUS_11620	sequence17:50597..50953(+)	frameshift,internal_stop_codon	50340..50342(+)	50622,50534	WP_010919946.1	glutathione S-transferase family protein	82.2	45.2	30.9
MGA_1191	LOCUS_11740	sequence17:62217..62633(-)	partial			WP_000706722.1	GNAT family N-acetyltransferase	72.5	73.0	31.1
MGA_1234	LOCUS_12170	sequence18:3688..4221(-)	partial			WP_011946663.1	translesion error-prone DNA polymerase V autoproteolytic subunit	54.2	55.7	62.9
MGA_1235	LOCUS_12180	sequence18:4631..5083(+)	partial			WP_011946663.1	translesion error-prone DNA polymerase V autoproteolytic subunit	86.0	74.7	56.2
MGA_1239	LOCUS_12220	sequence18:7440..8183(+)	partial			WP_010943400.1	ATP-dependent Clp protease proteolytic subunit	87.9	66.6	53.5
MGA_1253	LOCUS_12360	sequence18:18418..19341(+)	partial			WP_093649644.1	ISL3 family transposase	83.4	40.7	23.0
MGA_1276	LOCUS_12590	sequence18:50608..51882(+)	partial			WP_093649644.1	ISL3 family transposase	88.2	58.7	21.4
MGA_1277	LOCUS_12600	sequence18:51943..52440(+)	partial			WP_010946206.1	MFS transporter	74.5	29.4	36.6
MGA_1287	LOCUS_12700	sequence18:63270..63539(+)	frameshift		63533	WP_011142671.1	IS6 family transposase	100.0	37.7	55.1
MGA_1303	LOCUS_12840	sequence20:11017..12672(+)	partial			WP_000083993.1	copper-exporting P-type ATPase CopA	32.5	20.5	35.3
MGA_1328	LOCUS_13090	sequence20:41115..41723(+)	frameshift		41687	WP_010948053.1	NADPH-dependent 2,4-dienoyl-CoA reductase	95.5	28.6	87.6
MGA_1329	LOCUS_13100	sequence20:41684..43141(+)	frameshift		41693	WP_010948053.1	NADPH-dependent 2,4-dienoyl-CoA reductase	99.8	71.7	77.7
MGA_1387	LOCUS_13680	sequence20:107326..108042(+)	partial			WP_011122349.1	potassium channel family protein	58.8	67.1	32.9
MGA_1405	LOCUS_13860	sequence20:124689..125138(-)	partial			WP_003091446.1	prephenate dehydratase	96.0	39.2	49.0
MGA_1406	LOCUS_13870	sequence20:125143..125550(-)	frameshift		125552	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_1407	LOCUS_13880	sequence20:125957..126619(-)	partial			WP_002049199.1	prephenate dehydratase	92.3	55.8	54.9
MGA_1438	LOCUS_14190	sequence20:157248..157838(+)	frameshift		157811	WP_010947284.1	transporter substrate-binding domain-containing protein	90.3	71.8	33.0
MGA_1439	LOCUS_14200	sequence20:157819..157992(+)	frameshift		157829	WP_015444955.1	transporter substrate-binding domain-containing protein	93.0	21.8	52.8
MGA_1441	LOCUS_14220	sequence20:158610..159113(+)	internal_stop_codon	159111..159113(+)		WP_019218195.1	acyl-CoA dehydrogenase family protein	100.0	29.4	87.4
MGA_1442	LOCUS_14230	sequence20:159270..160319(+)	internal_stop_codon	159111..159113(+)		WP_019218195.1	acyl-CoA dehydrogenase family protein	100.0	61.3	88.5
MGA_1461	LOCUS_14420	sequence20:178833..180905(+)	partial			WP_162992489.1	FUSC family protein	23.6	24.6	26.7
MGA_1467	LOCUS_14480	sequence20:186199..187362(+)	partial			WP_014538142.1	CocE/NonD family hydrolase	87.1	47.0	25.1
MGA_1470	LOCUS_14510	sequence20:189262..189675(+)	partial			WP_157860391.1	leucine-rich repeat protein	92.7	6.5	44.3
MGA_1473	LOCUS_14540	sequence21:4345..5340(-)	partial			WP_002322009.1	protein rep	71.3	76.8	33.7
MGA_1476	LOCUS_14550	sequence22:241..849(+)	frameshift		218	WP_010948400.1	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	93.1	38.1	59.6
MGA_1477	LOCUS_14560	sequence22:856..1164(+)	partial			WP_010948399.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	83.3	53.1	64.7
MGA_1482	LOCUS_14600	sequence23:166..657(+)	frameshift		613,142	WP_010947325.1	3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein	93.9	22.8	74.5
MGA_1483	LOCUS_14610	sequence23:654..1685(+)	frameshift		618	WP_010947325.1	3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein	100.0	50.6	75.8
MGA_1490	LOCUS_14680	sequence23:5018..5701(+)	partial			WP_015444462.1	hypothetical protein	97.4	73.3	39.6
MGA_1503	LOCUS_14810	sequence23:20384..20605(+)	partial			WP_002209939.1	FAD assembly factor SdhE	89.0	73.9	40.0
MGA_1514	LOCUS_14920	sequence23:32311..32892(-)	frameshift		32954	WP_010947289.1	dihydrolipoamide acetyltransferase family protein	99.5	52.2	72.5
MGA_1515	LOCUS_14930	sequence23:32892..33422(-)	frameshift		32954	WP_010947289.1	dihydrolipoamide acetyltransferase family protein	87.5	41.4	79.2
MGA_1522	LOCUS_15000	sequence23:40006..40689(+)	frameshift		40572	WP_010947281.1	UDP-2,3-diacylglucosamine diphosphatase	63.4	59.5	61.1
MGA_1523	LOCUS_15010	sequence23:40686..40904(+)	frameshift		40572	WP_010947281.1	UDP-2,3-diacylglucosamine diphosphatase	86.1	25.6	48.4
MGA_1566	LOCUS_15440	sequence23:81777..82751(-)	frameshift		81842	WP_010947246.1	HlyD family type I secretion periplasmic adaptor subunit	94.1	80.7	64.9
MGA_1569	LOCUS_15470	sequence23:85577..87787(+)	partial			WP_010948248.1	lpg2546 family Dot/Icm T4SS effector	20.0	31.6	34.0
MGA_1573	LOCUS_15510	sequence23:89766..91460(-)	frameshift		89795	WP_010947241.1	bifunctional DedA family/phosphatase PAP2 family protein	98.4	82.3	48.8
MGA_1590	LOCUS_15680	sequence23:105641..106420(-)	frameshift		106629	WP_010947076.1	DNA polymerase III subunit delta	98.1	74.5	48.4
MGA_1619	LOCUS_15960	sequence24:10317..11111(-)	partial			WP_010948104.1	Dot/Icm T4SS effector LegL7	89.8	68.1	36.0
MGA_1642	LOCUS_16190	sequence24:35606..35968(-)	partial			WP_011461351.1	response regulator transcription factor	86.7	43.7	36.5
MGA_1651	LOCUS_16280	sequence24:41996..42265(-)	frameshift		41998	WP_013096602.1	GNAT family N-acetyltransferase	92.1	45.6	38.6
MGA_1659	LOCUS_16360	sequence24:50081..50479(+)	partial			WP_010958422.1	ATP-binding protein	87.9	17.5	37.9
MGA_1661	LOCUS_16380	sequence24:51211..51375(+)	partial			WP_015704536.1	transposase	87.0	31.3	45.1
MGA_1664	LOCUS_16410	sequence24:54427..54720(-)	frameshift		54432	WP_013096602.1	GNAT family N-acetyltransferase	97.9	52.2	39.6
MGA_1666	LOCUS_16430	sequence24:56389..57309(+)	partial			WP_011024166.1	leucine-rich repeat protein	41.8	7.3	37.5
MGA_1668	LOCUS_16450	sequence24:57955..58386(-)	partial			WP_011836913.1	GNAT family N-acetyltransferase	73.4	77.2	33.3
MGA_1674	LOCUS_16510	sequence24:62325..64262(+)	partial			WP_004535621.1	S53 family peptidase	74.1	74.1	24.4
MGA_1685	LOCUS_16620	sequence24:78073..79083(-)	frameshift		78105	WP_010967587.1	HlyD family efflux transporter periplasmic adaptor subunit	97.9	83.0	33.4
MGA_1747	LOCUS_17220	sequence25:36447..38699(-)	partial			WP_015444477.1	mechanosensitive ion channel	49.7	49.5	37.0
MGA_1755	LOCUS_17300	sequence25:44360..44809(-)	frameshift		44859	WP_010945788.1	amino acid permease	96.6	31.1	68.8
MGA_1756	LOCUS_17310	sequence25:44857..45741(-)	frameshift		44859	WP_010945788.1	amino acid permease	100.0	63.5	68.0
MGA_1762	LOCUS_17370	sequence25:51852..52259(+)	frameshift		51849	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_1776	LOCUS_17500	sequence26:7753..8010(+)	partial			WP_118826550.1	bifunctional alpha/beta hydrolase/OsmC family protein	78.8	17.0	39.1
MGA_1779	LOCUS_17530	sequence26:10873..12123(+)	partial			WP_027390899.1	InlB B-repeat-containing protein	71.4	4.7	28.4
MGA_1783	LOCUS_17570	sequence26:14644..16188(+)	partial			WP_010948684.1	lpg3000 family Dot/Icm T4SS effector	44.6	37.9	28.2
MGA_1785	LOCUS_17590	sequence26:16522..17718(+)	partial			WP_016357011.1	serine hydrolase domain-containing protein	70.9	57.5	24.7
MGA_1798	LOCUS_17720	sequence26:32989..33501(-)	partial			WP_011036524.1	acyl-CoA desaturase	94.1	46.4	53.7
MGA_1801	LOCUS_17750	sequence26:35198..36292(+)	frameshift		36220	WP_010945960.1	cytochrome ubiquinol oxidase subunit I	94.2	75.2	81.9
MGA_1802	LOCUS_17760	sequence26:36340..36564(+)	frameshift		36220	WP_010945960.1	cytochrome ubiquinol oxidase subunit I	100.0	16.2	73.0
MGA_1809	LOCUS_17830	sequence26:43900..44301(+)	partial			WP_010947889.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	93.2	15.5	31.2
MGA_1830	LOCUS_18030	sequence27:9053..10210(-)	partial			WP_010974919.1	T-DNA border endonuclease VirD2	42.3	41.2	29.9
MGA_1846	LOCUS_18190	sequence27:23049..23375(-)	partial			WP_010946960.1	PDDEXK nuclease domain-containing protein	90.7	27.8	82.7
MGA_1847	LOCUS_18200	sequence27:23454..23699(+)	partial			WP_010948640.1	integration host factor subunit beta	87.7	68.9	63.4
MGA_1852	LOCUS_18250	sequence27:29733..31721(+)	partial			WP_011101323.1	MucBP domain-containing protein	69.9	36.9	22.8
MGA_1853	LOCUS_18260	sequence27:32270..33544(+)	partial			WP_093649644.1	ISL3 family transposase	88.2	58.7	21.4
MGA_1860	LOCUS_18330	sequence27:37131..38288(+)	partial			WP_010974919.1	T-DNA border endonuclease VirD2	42.3	41.2	30.4
MGA_1869	LOCUS_18420	sequence27:45932..46690(+)	frameshift		45848	WP_167691470.1	IS3 family transposase	95.6	65.6	66.8
MGA_1870	LOCUS_18430	sequence27:46733..48520(-)	partial			WP_010948192.1	Dot/Icm T4SS GTPase-activating effector LepB	44.4	21.1	33.9
MGA_1872	LOCUS_18450	sequence27:50595..51869(-)	partial			WP_093649644.1	ISL3 family transposase	88.2	58.7	21.4
MGA_1873	LOCUS_18460	sequence27:51961..52389(+)	partial			WP_010947790.1	conjugative transfer relaxase/helicase TraI	95.1	6.8	47.4
MGA_1874	LOCUS_18470	sequence27:52447..53721(+)	partial			WP_093649644.1	ISL3 family transposase	88.2	58.7	21.4
MGA_1905	LOCUS_18760	sequence28:25330..26376(+)	frameshift		26271	WP_010946231.1	Dot/Icm T4SS effector AnkC/LegA12	89.7	69.5	29.9
MGA_1920	LOCUS_18910	sequence28:41978..43393(-)	partial			WP_012545854.1	glycosyltransferase family 39 protein	79.6	54.8	29.4
MGA_1939	LOCUS_19100	sequence28:65479..66648(+)	partial			WP_004557112.1	oxygen sensor histidine kinase FixL	61.4	28.9	35.1
MGA_1946	LOCUS_19170	sequence28:71211..72026(-)	partial			WP_013528222.1	AraC family transcriptional regulator	40.6	41.9	32.2
MGA_1961	LOCUS_19320	sequence28:91661..92728(+)	partial			WP_010948287.1	SGNH/GDSL hydrolase family protein	97.5	71.1	41.9
MGA_1968	LOCUS_19390	sequence28:96933..97739(+)	partial			WP_010947889.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	98.1	32.4	39.6
MGA_1971	LOCUS_19420	sequence28:106485..107996(+)	frameshift		107984	WP_010902208.1	chromosome segregation protein SMC	84.3	29.7	22.9
MGA_1973	LOCUS_19440	sequence28:112805..113197(+)	frameshift		113146	WP_011817008.1	curved DNA-binding protein	88.5	36.9	53.0
MGA_1985	LOCUS_19550	sequence29:11791..12171(-)	partial			WP_010958014.1	GIY-YIG nuclease family protein	64.3	66.9	63.0
MGA_1995	LOCUS_19650	sequence29:20219..21988(-)	partial			WP_012502785.1	tetratricopeptide repeat protein	78.1	70.1	39.7
MGA_2016	LOCUS_19860	sequence29:53001..53360(-)	partial			WP_011403600.1	HDOD domain-containing protein	97.5	16.8	31.6
MGA_2025	LOCUS_19950	sequence29:60692..61705(-)	partial			WP_013222580.1	27-O-demethylrifamycin SV methyltransferase	67.7	78.7	26.0
MGA_2029	LOCUS_19990	sequence29:64942..67704(-)	partial			WP_011056556.1	pentapeptide repeat-containing protein	14.8	29.2	44.1
MGA_2032	LOCUS_20020	sequence29:69846..71840(+)	partial			WP_010945992.1	HAD-IC family P-type ATPase	91.3	71.0	67.4
MGA_2037	LOCUS_20070	sequence29:78383..79279(-)	partial			WP_010945983.1	proton-conducting transporter membrane subunit	99.0	58.3	55.6
MGA_2045	LOCUS_20150	sequence29:86864..87238(+)	partial			WP_003022250.1	metalloregulator ArsR/SmtB family transcription factor	60.5	75.8	40.0
MGA_2058	LOCUS_20280	sequence29:97416..99038(-)	partial			WP_000125226.1	S1C family serine protease	60.2	59.5	27.9
MGA_2069	LOCUS_20390	sequence29:109048..109392(+)	partial			WP_011214707.1	type IVB secretion system protein IcmD/DotP	78.9	66.7	54.4
MGA_2077	LOCUS_20470	sequence29:115704..116774(+)	frameshift		116750	WP_010946038.1	EAL domain-containing protein	98.0	47.3	86.3
MGA_2078	LOCUS_20480	sequence29:116771..117919(+)	frameshift		116750	WP_010946038.1	EAL domain-containing protein	99.0	51.1	80.7
MGA_2086	LOCUS_20560	sequence29:124729..125100(+)	partial			WP_010947688.1	Dot/Icm T4SS effector PieF	71.5	74.4	39.8
MGA_2092	LOCUS_20620	sequence29:130513..131067(+)	frameshift		131007	WP_015444450.1	adenylate-forming enzyme	91.8	39.9	58.6
MGA_2093	LOCUS_20630	sequence29:131115..131825(+)	frameshift		131010	WP_015444450.1	adenylate-forming enzyme	91.9	50.9	63.6
MGA_2113	LOCUS_20830	sequence29:157209..157424(+)	frameshift		157421	WP_025862451.1	CaiB/BaiF CoA-transferase family protein	100.0	20.1	91.5
MGA_2114	LOCUS_20840	sequence29:157490..158332(+)	frameshift		158171,157421	WP_025862451.1	CaiB/BaiF CoA-transferase family protein	81.1	64.3	82.8
MGA_2115	LOCUS_20850	sequence29:158423..159208(+)	frameshift		159130,159196	WP_010948246.1	MltA domain-containing protein	92.0	52.5	78.8
MGA_2116	LOCUS_20860	sequence29:159201..159797(+)	frameshift		159130,159199	WP_010948246.1	MltA domain-containing protein	100.0	43.1	82.8
MGA_2119	LOCUS_20890	sequence29:160421..160633(-)	frameshift		160617	WP_005694080.1	transposase	84.3	33.5	54.2
MGA_2130	LOCUS_21000	sequence29:173159..175483(+)	frameshift		175456	WP_010930312.1	TM0106 family RecB-like putative nuclease	98.4	66.7	34.2
MGA_2131	LOCUS_21010	sequence29:175540..176556(+)	frameshift		175456	WP_010930312.1	TM0106 family RecB-like putative nuclease	88.8	26.1	52.0
MGA_2139	LOCUS_21090	sequence29:183393..183893(-)	partial			WP_010941622.1	transposase	89.2	46.3	41.1
MGA_2140	LOCUS_21100	sequence29:184109..184390(-)	frameshift		184123	WP_223804314.1	IS3-like element ISLpn8 family transposase	92.5	23.3	95.3
MGA_2142	LOCUS_21120	sequence29:185791..187311(+)	partial			WP_000831398.1	site-specific DNA-methyltransferase	17.0	23.1	39.5
MGA_2144	LOCUS_21140	sequence29:187710..189674(+)	partial			WP_012257550.1	restriction endonuclease	15.7	28.8	44.1
MGA_2145	LOCUS_21150	sequence29:189880..190515(-)	frameshift		190742	WP_102990622.1	IS3 family transposase	95.7	51.7	71.3
MGA_2146	LOCUS_21160	sequence29:190713..191006(-)	frameshift		190742	WP_102990622.1	IS3 family transposase	90.7	22.5	69.3
MGA_2148	LOCUS_21180	sequence29:193205..197266(-)	partial			WP_000963924.1	hypothetical protein	66.6	71.9	21.5
MGA_2156	LOCUS_21260	sequence29:203315..205342(-)	partial			WP_163682802.1	AAA family ATPase	47.4	48.6	43.7
MGA_2159	LOCUS_21290	sequence29:205975..206193(-)	partial			WP_011263379.1	AlpA family transcriptional regulator	73.6	84.1	56.6
MGA_2169	LOCUS_21390	sequence29:219347..219595(+)	partial			WP_010945893.1	hypothetical protein	61.0	82.0	62.0
MGA_2171	LOCUS_21410	sequence29:220386..223160(-)	partial			WP_010945891.1	hypothetical protein	56.0	60.7	31.7
MGA_2175	LOCUS_21450	sequence29:226090..227373(+)	frameshift		227283	WP_010945888.1	acetate--CoA ligase	93.2	64.8	66.3
MGA_2176	LOCUS_21460	sequence29:227391..227960(+)	frameshift		227289	WP_010945888.1	acetate--CoA ligase	96.3	29.0	74.2
MGA_2187	LOCUS_21570	sequence29:238676..239569(+)	partial			WP_019895278.1	Calx-beta domain-containing protein	78.5	60.4	26.9
MGA_2191	LOCUS_21610	sequence29:242570..243457(-)	partial			WP_010967372.1	SMP-30/gluconolactonase/LRE family protein	95.3	49.6	40.4
MGA_2198	LOCUS_21680	sequence29:249316..251061(-)	partial			WP_012256367.1	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	32.2	68.6	33.3
MGA_2199	LOCUS_21690	sequence29:251334..251561(+)	frameshift		251531	WP_164928820.1	IS5 family transposase	81.3	24.1	50.8
MGA_2200	LOCUS_21700	sequence29:251537..251944(+)	frameshift		251534	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_2207	LOCUS_21760	sequence30:1603..2883(+)	frameshift		1582	WP_011104442.1	IS66 family transposase	99.1	83.9	41.3
MGA_2208	LOCUS_21770	sequence30:3072..3776(+)	partial			WP_187436542.1	IS256 family transposase	96.2	52.7	59.6
MGA_2219	LOCUS_21880	sequence30:12554..12961(+)	frameshift		12551	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_2223	LOCUS_21920	sequence30:17114..18130(+)	partial			WP_011104442.1	IS66 family transposase	90.5	61.2	39.4
MGA_2246	LOCUS_22140	sequence31:20199..20903(-)	frameshift		21025,20230	WP_010947924.1	Dot/Icm type IV secretion system effector LegA2	89.7	40.7	37.0
MGA_2247	LOCUS_22150	sequence31:21023..21286(-)	frameshift		21025	WP_010947924.1	Dot/Icm type IV secretion system effector LegA2	85.1	13.9	44.6
MGA_2266	LOCUS_22340	sequence31:43634..43939(+)	partial			WP_010947205.1	zinc ribbon domain-containing protein	61.4	59.6	79.0
MGA_2277	LOCUS_22450	sequence31:55263..55937(+)	partial			WP_010966937.1	L,D-transpeptidase	90.2	69.2	33.2
MGA_2280	LOCUS_22480	sequence31:58308..59036(-)	frameshift,internal_stop_codon	58256..58258(-)	58322,58267	WP_010947291.1	bifunctional TVP38/TMEM64 family protein/FAD-dependent oxidoreductase	88.4	30.0	52.8
MGA_2285	LOCUS_22530	sequence31:66476..66811(+)	partial			WP_164920907.1	rhodanese-like domain-containing protein	88.3	53.9	36.7
MGA_2292	LOCUS_22600	sequence31:75046..75573(-)	frameshift		75541	WP_004186443.1	potassium-transporting ATPase subunit KdpC	87.4	79.3	58.2
MGA_2300	LOCUS_22680	sequence31:85259..86647(+)	partial			WP_001557544.1	site-specific integrase	95.2	71.0	38.8
MGA_2304	LOCUS_22720	sequence31:88333..88815(+)	partial			WP_010947889.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	99.4	20.7	36.8
MGA_2305	LOCUS_22730	sequence31:88968..93569(+)	partial			WP_011267188.1	hybrid non-ribosomal peptide synthetase/type I polyketide synthase	95.9	35.1	33.5
MGA_2306	LOCUS_22740	sequence31:93981..94388(+)	frameshift		93978	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_2307	LOCUS_22750	sequence31:94400..95155(+)	frameshift		95131	WP_189716469.1	type I polyketide synthase	94.4	12.8	23.4
MGA_2308	LOCUS_22760	sequence31:95152..96834(+)	partial			WP_015444193.1	amino acid adenylation domain-containing protein	59.8	24.8	30.1
MGA_2310	LOCUS_22780	sequence31:98316..100523(+)	frameshift		100487	WP_010947889.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	71.3	64.3	39.7
MGA_2311	LOCUS_22790	sequence31:100520..101005(+)	frameshift		100487	WP_010947889.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	96.3	19.1	40.3
MGA_2337	LOCUS_23050	sequence31:125486..125677(-)	frameshift		125682	WP_010947122.1	phosphate acyltransferase PlsX	100.0	18.4	82.5
MGA_2338	LOCUS_23060	sequence31:125635..126513(-)	frameshift		125682	WP_010947122.1	phosphate acyltransferase PlsX	95.2	81.3	83.1
MGA_2378	LOCUS_23460	sequence31:163965..164174(-)	partial			WP_010947086.1	SEL1-like repeat protein	84.1	15.4	48.3
MGA_2389	LOCUS_23570	sequence32:11008..11346(+)	frameshift		11337	WP_011216765.1	ABC transporter ATP-binding protein	100.0	48.9	65.2
MGA_2390	LOCUS_23580	sequence32:11337..11696(+)	frameshift		11337	WP_011216765.1	ABC transporter ATP-binding protein	100.0	52.0	75.6
MGA_2391	LOCUS_23590	sequence32:11693..12070(+)	frameshift		12055	WP_015443885.1	ABC transporter permease	96.8	30.5	73.6
MGA_2392	LOCUS_23600	sequence32:12142..12885(+)	frameshift		12055	WP_015443885.1	ABC transporter permease	100.0	62.2	80.6
MGA_2416	LOCUS_23840	sequence32:31179..31586(-)	frameshift		31588	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_2447	LOCUS_24150	sequence32:64008..65510(-)	partial			WP_010948684.1	lpg3000 family Dot/Icm T4SS effector	49.8	41.5	30.0
MGA_2481	LOCUS_24490	sequence32:101302..102207(+)	frameshift		102186	WP_010948541.1	tetratricopeptide repeat protein	40.9	39.9	61.0
MGA_2496	LOCUS_24640	sequence32:117132..117695(+)	internal_stop_codon	117069..117071(+)		WP_010948522.1	thiopurine S-methyltransferase	98.9	83.7	49.2
MGA_2507	LOCUS_24750	sequence32:126477..126764(-)	frameshift		126882	WP_131641787.1	IS5 family transposase	81.1	30.0	53.2
MGA_2508	LOCUS_24760	sequence32:127295..127540(-)	partial			WP_013530214.1	alpha/beta hydrolase	95.1	28.3	42.9
MGA_2512	LOCUS_24800	sequence32:131840..134173(-)	partial			WP_120647683.1	ATP-binding protein	62.3	46.8	36.8
MGA_2523	LOCUS_24910	sequence32:146007..146414(-)	frameshift		146416	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_2524	LOCUS_24920	sequence32:146390..146617(-)	frameshift		146419	WP_164928820.1	IS5 family transposase	81.3	24.1	50.8
MGA_2527	LOCUS_24950	sequence32:148870..149901(-)	partial			WP_005808454.1	CapA family protein	88.3	74.1	32.4
MGA_2532	LOCUS_25000	sequence32:154390..156567(-)	partial			WP_015443931.1	T4SS effector ferrous iron transporter IroT/MavN	48.8	53.6	58.1
MGA_2547	LOCUS_25150	sequence32:175545..176768(+)	partial			WP_010948491.1	Dot/Icm T4SS effector Lem29	73.0	63.7	37.7
MGA_2549	LOCUS_25170	sequence32:177495..177845(-)	partial			WP_010948488.1	CDP-alcohol phosphatidyltransferase family protein	94.8	59.8	62.7
MGA_2570	LOCUS_25380	sequence32:196693..197574(+)	frameshift		197547	WP_010948467.1	NADH-quinone oxidoreductase subunit L	97.3	43.4	77.9
MGA_2571	LOCUS_25390	sequence32:197547..198665(+)	frameshift		197547	WP_010948467.1	NADH-quinone oxidoreductase subunit L	96.2	54.5	79.1
MGA_2578	LOCUS_25450	sequence32:206916..207212(+)	frameshift		207191	WP_010948461.1	30S ribosome-binding factor RbfA	93.9	74.8	72.8
MGA_2579	LOCUS_25460	sequence32:207270..207860(+)	frameshift		207842	WP_015443946.1	tRNA pseudouridine(55) synthase TruB	97.4	63.0	67.0
MGA_2580	LOCUS_25470	sequence32:207857..208198(+)	frameshift		207842	WP_015443946.1	tRNA pseudouridine(55) synthase TruB	92.9	34.3	41.0
MGA_2589	LOCUS_25560	sequence32:216222..216461(+)	partial			WP_010948110.1	Dot/Icm T4SS effector Lem23	98.7	22.2	53.1
MGA_2597	LOCUS_25640	sequence32:221610..223388(+)	partial			WP_013224838.1	DUF885 domain-containing protein	61.8	16.7	42.4
MGA_2617	LOCUS_25840	sequence32:240074..240610(+)	partial			WP_000262342.1	MgtC/SapB family protein	68.0	51.1	31.0
MGA_2629	LOCUS_25960	sequence32:251691..252824(-)	partial			WP_015444881.1	polyphosphate kinase 1	98.7	53.9	78.2
MGA_2633	LOCUS_26000	sequence32:255197..256186(-)	partial			WP_015444881.1	polyphosphate kinase 1	95.1	45.2	79.6
MGA_2674	LOCUS_26380	sequence32:308469..309389(-)	partial			WP_001011124.1	leucine-rich repeat domain-containing protein	97.1	69.7	40.4
MGA_2692	LOCUS_26560	sequence32:323592..323792(+)	partial			WP_103015481.1	50S ribosomal protein L35	68.2	69.2	64.4
MGA_2709	LOCUS_26730	sequence32:338805..339110(+)	frameshift		339101	WP_027225287.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	99.0	31.9	76.0
MGA_2710	LOCUS_26740	sequence32:339110..339745(+)	frameshift		339104	WP_027225287.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	98.1	66.1	57.0
MGA_2715	LOCUS_26790	sequence32:343868..345385(+)	partial			WP_000837178.1	glycosyl hydrolase family 18 protein	61.2	43.0	24.8
MGA_2755	LOCUS_27190	sequence32:382321..382485(-)	frameshift		382499	WP_010947762.1	ATP-binding cassette domain-containing protein	100.0	22.0	75.9
MGA_2756	LOCUS_27200	sequence32:382494..383057(-)	frameshift		382499	WP_010947762.1	ATP-binding cassette domain-containing protein	100.0	76.3	79.1
MGA_2759	LOCUS_27230	sequence32:385305..386276(+)	partial			WP_011262187.1	YccS family putative transporter	43.7	19.1	29.1
MGA_2768	LOCUS_27310	sequence32:395376..395741(-)	partial			WP_101899431.1	ISL3 family transposase	96.7	29.9	76.1
MGA_2783	LOCUS_27460	sequence32:411119..412024(+)	partial			WP_011074383.1	HlyD family efflux transporter periplasmic adaptor subunit	86.4	59.0	27.3
MGA_2808	LOCUS_27710	sequence32:438170..439330(+)	partial			WP_000435433.1	adenylate/guanylate cyclase domain-containing protein	54.7	43.8	51.2
MGA_2819	LOCUS_27820	sequence32:450608..451072(-)	frameshift		451133,451247	WP_010948355.1	GGDEF domain-containing protein	88.3	36.7	53.7
MGA_2834	LOCUS_27970	sequence33:9893..10489(+)	frameshift		10468	WP_015444565.1	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	100.0	70.2	58.6
MGA_2835	LOCUS_27980	sequence33:10489..10719(+)	frameshift		10468	WP_015444565.1	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	100.0	26.6	44.7
MGA_2840	LOCUS_28030	sequence33:14649..15677(+)	frameshift		15668	WP_010947022.1	ATP-binding protein	100.0	72.6	82.7
MGA_2841	LOCUS_28040	sequence33:15797..16075(+)	frameshift		15668	WP_010947022.1	ATP-binding protein	88.0	17.2	77.8
MGA_2848	LOCUS_28110	sequence33:21464..21721(-)	frameshift		21726	WP_015444568.1	RNA polymerase sigma factor RpoS	100.0	24.9	95.3
MGA_2849	LOCUS_28120	sequence33:21718..22485(-)	frameshift		21726	WP_015444568.1	RNA polymerase sigma factor RpoS	99.2	74.5	79.9
MGA_2873	LOCUS_28360	sequence33:43182..43778(-)	partial			WP_010947882.1	GNAT family N-acetyltransferase	70.7	41.4	52.1
MGA_2875	LOCUS_28380	sequence33:45780..47495(-)	partial			WP_010947889.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	94.9	67.1	43.5
MGA_2877	LOCUS_28400	sequence33:49269..50738(+)	partial			WP_115176064.1	hypothetical protein	68.1	66.8	40.8
MGA_2878	LOCUS_28410	sequence33:50772..51533(-)	partial			WP_015444610.1	cyclopropane fatty acyl phospholipid synthase	98.8	65.3	73.6
MGA_2880	LOCUS_28430	sequence33:52826..53290(-)	partial			WP_015444610.1	cyclopropane fatty acyl phospholipid synthase	89.6	36.8	58.7
MGA_2890	LOCUS_28530	sequence33:69486..71504(-)	partial			WP_010947624.1	lpg1907 family Dot/Icm T4SS effector	64.1	70.9	45.7
MGA_2907	LOCUS_28700	sequence33:87543..89291(+)	partial			WP_010948231.1	Dot/Icm T4SS effector Lem27	50.9	50.0	28.5
MGA_2913	LOCUS_28760	sequence33:93903..95654(+)	partial			WP_010947924.1	Dot/Icm type IV secretion system effector LegA2	74.6	74.6	24.7
MGA_2915	LOCUS_28780	sequence33:96874..97488(-)	frameshift		97532	WP_010946958.1	flagellar hook-associated protein FlgL	100.0	49.6	54.4
MGA_2916	LOCUS_28790	sequence33:97485..98108(-)	frameshift		97535	WP_010946958.1	flagellar hook-associated protein FlgL	91.8	46.2	48.4
MGA_2925	LOCUS_28880	sequence33:106699..107106(-)	frameshift		107108	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_2932	LOCUS_28950	sequence33:111501..112541(-)	frameshift		112723	WP_010946946.1	MFS transporter	98.6	78.6	52.6
MGA_2944	LOCUS_29070	sequence33:125138..125602(-)	partial			WP_010946630.1	type II secretory system protein LspC	68.2	62.1	61.0
MGA_2965	LOCUS_29280	sequence33:148061..148945(-)	partial			WP_003113610.1	aminoglycoside phosphotransferase family protein	64.6	68.7	34.3
MGA_2969	LOCUS_29320	sequence33:152246..152788(+)	frameshift		152782	WP_010946705.1	amino acid permease	94.4	34.9	83.5
MGA_2970	LOCUS_29330	sequence33:152872..153732(+)	frameshift		152785	WP_010946705.1	amino acid permease	95.5	56.1	74.4
MGA_2981	LOCUS_29440	sequence33:164466..166706(+)	partial			WP_015444620.1	glycosyl hydrolase family 18 protein	58.4	55.8	55.0
MGA_3000	LOCUS_29630	sequence33:180892..181194(+)	frameshift		181128	WP_010946569.1	indole-3-glycerol phosphate synthase TrpC	95.0	37.2	54.2
MGA_3001	LOCUS_29640	sequence33:181311..181661(+)	frameshift		181128	WP_010946569.1	indole-3-glycerol phosphate synthase TrpC	100.0	45.0	71.6
MGA_3004	LOCUS_29670	sequence33:183112..184896(-)	partial			WP_011073976.1	retention module-containing protein	53.4	10.9	26.4
MGA_3005	LOCUS_29680	sequence33:184868..>188232(-)	partial			WP_011707240.1	retention module-containing protein	82.7	18.1	41.8
MGA_3007	LOCUS_29690	sequence34:2890..3336(+)	frameshift		3384,3273	WP_011056358.1	TIGR00300 family protein	81.8	16.7	45.1
MGA_3009	LOCUS_29710	sequence34:3866..4330(+)	partial			WP_010946963.1	translesion error-prone DNA polymerase V autoproteolytic subunit	81.2	74.4	56.8
MGA_3013	LOCUS_29740	sequence35:310..717(+)	frameshift		248,287	WP_032802668.1	IscS subfamily cysteine desulfurase	100.0	35.1	65.2
MGA_3041	LOCUS_30020	sequence35:27223..28686(+)	partial			WP_010946666.1	type IV pilus secretin PilQ	89.3	62.8	61.6
MGA_3051	LOCUS_30120	sequence35:38767..39423(+)	frameshift		39405	WP_002208616.1	efflux RND transporter permease AcrB	98.2	20.4	72.4
MGA_3052	LOCUS_30130	sequence35:39483..41879(+)	frameshift		39405	WP_015704610.1	multidrug efflux RND transporter permease subunit AcrB	100.0	76.1	74.3
MGA_3054	LOCUS_30150	sequence35:43016..43237(+)	frameshift		43234	WP_010946672.1	isoleucine--tRNA ligase	100.0	7.8	87.7
MGA_3079	LOCUS_30400	sequence35:78404..78955(+)	partial			WP_010946564.1	transglutaminase-like cysteine peptidase	96.2	72.1	56.2
MGA_3103	LOCUS_30620	sequence36:17078..17773(+)	frameshift		17758	WP_011144408.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	99.6	62.3	77.8
MGA_3104	LOCUS_30630	sequence36:17764..18186(+)	frameshift		17767	WP_011144408.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	99.3	37.7	83.5
MGA_3108	LOCUS_30670	sequence36:21718..22188(+)	partial			WP_010958154.1	CBS domain-containing protein	65.4	80.8	37.9
MGA_3113	LOCUS_30720	sequence36:25875..27230(+)	partial			WP_000700947.1	methyl-accepting chemotaxis protein	44.8	34.4	45.0
MGA_3129	LOCUS_30880	sequence36:40944..41837(-)	partial			WP_011461076.1	GGDEF domain-containing protein	53.5	48.0	41.6
MGA_3165	LOCUS_31240	sequence36:78677..79036(+)	frameshift		78982	WP_010947723.1	retropepsin-like aspartic protease	85.7	62.6	50.0
MGA_3168	LOCUS_31270	sequence36:82213..86469(+)	partial			WP_010948017.1	Dot/Icm T4SS effector Ceg28	54.0	62.6	25.8
MGA_3186	LOCUS_31430	sequence36:105052..105513(+)	partial			WP_015444147.1	Smr/MutS family protein	78.4	46.3	58.3
MGA_3199	LOCUS_31550	sequence37:5166..5660(-)	frameshift		5701	WP_011214095.1	glycine--tRNA ligase subunit alpha	100.0	54.5	89.6
MGA_3200	LOCUS_31560	sequence37:5684..6070(-)	frameshift		5701	WP_011214095.1	glycine--tRNA ligase subunit alpha	97.7	41.5	86.4
MGA_3205	LOCUS_31610	sequence37:11595..11897(+)	frameshift		11891	WP_010947571.1	VacJ family lipoprotein	99.0	38.1	63.6
MGA_3206	LOCUS_31620	sequence37:11918..12382(+)	frameshift		11891	WP_010947571.1	VacJ family lipoprotein	89.0	58.1	55.3
MGA_3208	LOCUS_31640	sequence37:12993..13676(-)	frameshift		13000,13690,12919	WP_011946762.1	glutathione synthase	97.8	69.6	75.2
MGA_3209	LOCUS_31650	sequence37:13601..13831(-)	frameshift		13690	WP_011946762.1	glutathione synthase	92.1	24.1	53.8
MGA_3210	LOCUS_31660	sequence37:13834..14751(-)	frameshift		14822	WP_010947573.1	glutamate--cysteine ligase	93.4	66.1	77.5
MGA_3211	LOCUS_31670	sequence37:14748..15128(-)	frameshift		14822	WP_010947573.1	glutamate--cysteine ligase	81.0	23.7	77.5
MGA_3228	LOCUS_31840	sequence37:30370..30618(+)	partial			WP_001279278.1	helix-turn-helix transcriptional regulator	72.0	49.6	52.5
MGA_3231	LOCUS_31870	sequence37:31468..32454(-)	partial			WP_091506663.1	DUF3631 domain-containing protein	86.9	68.0	27.4
MGA_3236	LOCUS_31920	sequence37:35302..36180(-)	partial			WP_015703417.1	tyrosine-type recombinase/integrase	92.1	68.8	35.4
MGA_3250	LOCUS_32060	sequence37:47205..47894(-)	frameshift		47899	WP_010947988.1	fumarylacetoacetate hydrolase family protein	97.8	67.5	80.4
MGA_3251	LOCUS_32070	sequence37:47864..48202(-)	frameshift		47899	WP_010947988.1	fumarylacetoacetate hydrolase family protein	100.0	33.7	63.4
MGA_3262	LOCUS_32180	sequence37:58024..58242(+)	frameshift		58039	WP_015704536.1	transposase	81.9	36.2	50.8
MGA_3281	LOCUS_32370	sequence37:80062..80946(+)	partial			WP_010946481.1	GGDEF domain-containing protein	100.0	59.7	41.8
MGA_3333	LOCUS_32890	sequence37:133490..133897(-)	frameshift		133899	WP_164928820.1	IS5 family transposase	86.7	46.2	51.3
MGA_3336	LOCUS_32920	sequence37:136566..137264(+)	partial			WP_010867600.1	NDP-sugar synthase	94.0	61.8	26.5
MGA_3338	LOCUS_32940	sequence37:138070..139212(+)	partial			WP_014206373.1	ankyrin repeat domain-containing protein	41.1	74.4	32.3
MGA_3340	LOCUS_32960	sequence37:140165..140686(+)	partial			WP_012437952.1	hypothetical protein	54.9	57.0	36.7
MGA_3350	LOCUS_33060	sequence37:149024..149923(-)	partial			WP_015704253.1	diguanylate cyclase	58.2	37.5	33.3
MGA_3367	LOCUS_33230	sequence37:175648..178074(-)	partial			WP_010947533.1	translocation/assembly module TamB domain-containing protein	71.5	68.9	44.0
MGA_3369	LOCUS_33250	sequence37:178592..179086(-)	frameshift		179154	WP_010947532.1	BamA/TamA family outer membrane protein	100.0	29.0	63.4
MGA_3370	LOCUS_33260	sequence37:179083..180279(-)	frameshift		179163	WP_010947532.1	BamA/TamA family outer membrane protein	86.2	61.4	53.6
MGA_3377	LOCUS_33320	sequence38:760..1653(+)	frameshift		1539	WP_011104442.1	IS66 family transposase	81.1	48.3	39.2
MGA_3378	LOCUS_33330	sequence38:1560..2297(+)	frameshift		1542	WP_011105416.1	IS66-like element ISPsy5 family transposase	99.2	47.0	42.4
MGA_3390	LOCUS_33450	sequence38:18816..19565(-)	frameshift		19729	WP_032828680.1	ABC transporter substrate-binding protein	100.0	34.7	66.3
MGA_3391	LOCUS_33460	sequence38:19697..20986(-)	frameshift		19729	WP_032828680.1	ABC transporter substrate-binding protein	95.8	57.4	65.3
MGA_3392	LOCUS_33470	sequence38:21063..21725(-)	frameshift		21808	WP_016356806.1	NAD-dependent DNA ligase LigA	99.1	32.4	66.1
MGA_3393	LOCUS_33480	sequence38:21683..23080(-)	frameshift		21811	WP_016356806.1	NAD-dependent DNA ligase LigA	98.3	65.7	65.6
MGA_3402	LOCUS_33570	sequence38:32045..32341(-)	frameshift		32050	WP_005693956.1	DUF2513 domain-containing protein	99.0	81.4	39.0
MGA_3403	LOCUS_33580	sequence38:32432..>33361(-)	partial			WP_003527152.1	FAD-binding oxidoreductase	99.4	74.8	51.0
MGA_3409	LOCUS_33640	sequence39:3935..4867(+)	partial			WP_010945770.1	hypothetical protein	69.0	52.0	31.4
MGA_3429	LOCUS_33840	sequence39:27677..29239(+)	partial			WP_010948684.1	lpg3000 family Dot/Icm T4SS effector	48.8	41.8	42.9
MGA_3451	LOCUS_34060	sequence39:47329..48330(+)	frameshift		47284	WP_003104851.1	MFS transporter	92.8	72.6	26.6
MGA_3452	LOCUS_34070	sequence39:48344..49195(-)	partial			WP_048061144.1	carotenoid biosynthesis protein	54.1	58.4	27.2
MGA_3472	LOCUS_34270	sequence39:70728..71375(-)	partial			WP_011213337.1	diguanylate cyclase	99.1	55.7	42.0
MGA_3492	LOCUS_34470	sequence39:92699..93544(+)	partial			WP_005095959.1	class I SAM-dependent methyltransferase	52.0	43.9	30.6
MGA_3534	LOCUS_34890	sequence39:135958..136233(-)	frameshift		136032	WP_010945877.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	75.8	15.1	65.2
MGA_3542	LOCUS_34970	sequence39:143267..143458(+)	frameshift		143279	WP_010945882.1	ABC transporter permease subunit	93.7	10.2	89.8
MGA_3543	LOCUS_34980	sequence39:143466..144215(+)	frameshift		144104	WP_010945883.1	nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein	84.3	48.6	89.5
MGA_3544	LOCUS_34990	sequence39:144191..144778(+)	frameshift		144104	WP_010945883.1	nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein	95.9	43.3	94.7
MGA_3546	LOCUS_35010	sequence40:1..186(+)	frameshift		171	WP_010948349.1	GTPase ObgE	86.9	15.5	67.9
MGA_3550	LOCUS_35050	sequence40:3420..3566(-)	partial			WP_010948035.1	exodeoxyribonuclease VII small subunit	77.1	48.7	78.4
MGA_3552	LOCUS_35070	sequence40:4919..5803(+)	frameshift		5755	WP_010948032.1	DNA repair protein RadA	95.2	62.2	79.6
MGA_3553	LOCUS_35080	sequence40:5797..6273(+)	frameshift		5758	WP_010948032.1	DNA repair protein RadA	100.0	34.9	84.8
MGA_3558	LOCUS_35130	sequence40:12921..15002(+)	partial			WP_010919415.1	2-isopropylmalate synthase	55.0	72.7	60.4