{ "type": "genome", "identifier": "GCF_900453115.1", "organism": "Moraxella osloensis", "title": "Moraxella osloensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "SC", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900453115.1", "bioproject": "PRJNA224116", "biosample": "SAMEA4384066", "wgs_master": "UGPY00000000.1", "refseq_category": "na", "taxid": "34062", "species_taxid": "34062", "organism_name": "Moraxella osloensis", "infraspecific_name": "strain=NCTC10465", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/08/01", "asm_name": "50450_C01", "asm_submitter": "SC", "gbrs_paired_asm": "GCA_900453115.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/453/115/GCF_900453115.1_50450_C01", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2691416", "genome_size_ungapped": "2691416", "gc_percent": "43.500000", "replicon_count": "0", "scaffold_count": "6", "contig_count": "6", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900453115.1-RS_2025_01_07", "annotation_date": "2025-01-07", "total_gene_count": "2440", "protein_coding_gene_count": "2313", "non_coding_gene_count": "64", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-08-01", "dateModified": "2018-08-01", "datePublished": "2018-08-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Moraxella osloensis" ], "sample_taxid": [ "34062" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [ "disease" ], "sample_host_disease_id": [], "sample_host_location": [ "USA: Atlanta, GA" ], "sample_host_location_id": [], "data_size": "0.758 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2691416", "Number of Sequences": "6", "Longest Sequences (bp)": "2434691", "N50 (bp)": "2434691", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "43.5", "Number of CDSs": "2380", "Average Protein Length": "319.1", "Coding Ratio (%)": "84.7", "Number of rRNAs": "12", "Number of tRNAs": "48", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Moraxella osloensis", "strain": "strain=NCTC10465", "accession": "GCA_900453115.1", "taxid": 34062, "species_taxid": 34062, "relation_to_type": "suspected-type", "validated": true, "ani": 100.0, "matched_fragments": 889, "total_fragments": 893, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Moraxella osloensis", "strain": "strain=FDAARGOS_870", "accession": "GCA_016028755.1", "taxid": 34062, "species_taxid": 34062, "relation_to_type": "suspected-type", "validated": true, "ani": 99.9976, "matched_fragments": 810, "total_fragments": 893, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Moraxella osloensis", "strain": "strain=CCUG 350", "accession": "GCA_001553955.1", "taxid": 34062, "species_taxid": 34062, "relation_to_type": "suspected-type", "validated": true, "ani": 99.9946, "matched_fragments": 876, "total_fragments": 893, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Moraxella osloensis", "strain": "strain=CCUG 350", "accession": "GCA_001679175.1", "taxid": 34062, "species_taxid": 34062, "relation_to_type": "suspected-type", "validated": true, "ani": 99.9311, "matched_fragments": 823, "total_fragments": 893, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acinetobacter johnsonii", "strain": 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893, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella_A", "ani_circumscription_radius": 95.0237, "mean_intra_species_ani": "96.28", "min_intra_species_ani": "95.11", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.88", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_904846145.1", "gtdb_species": "s__Psychrobacter immobilis_G", "ani": 79.3424, "matched_fragments": 79, "total_fragments": 893, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001591265.1", "gtdb_species": "s__Moraxella_A atlantae", "ani": 79.1613, "matched_fragments": 196, "total_fragments": 893, "gtdb_taxonomy": 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