# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_28	LOCUS_00280	sequence1:36770..36937(+)	partial			WP_020444595.1	hydroxymethylglutaryl-CoA synthase	100.0	42.6	100.0
MGA_32	LOCUS_00320	sequence1:41234..42220(+)	partial			WP_000952923.1	beta-lactam sensor/signal transducer MecR1	96.3	54.0	100.0
MGA_44	LOCUS_00440	sequence1:54817..55131(-)	frameshift,internal_stop_codon	55161..55163(-)	55163	WP_002485357.1	persulfide dioxygenase-sulfurtransferase CstB	100.0	23.5	89.4
MGA_45	LOCUS_00450	sequence1:55068..56072(-)	frameshift,internal_stop_codon	55161..55163(-)	55166	WP_002485357.1	persulfide dioxygenase-sulfurtransferase CstB	91.3	69.0	95.7
MGA_47	LOCUS_00470	sequence1:56325..56696(+)	partial			WP_003114208.1	HNH endonuclease	81.3	37.0	47.0
MGA_49	LOCUS_00490	sequence1:57938..58120(-)	partial			WP_126475239.1	IS1182 family transposase	100.0	11.0	91.7
MGA_50	LOCUS_00500	sequence1:58406..59515(-)	frameshift,internal_stop_codon	58405..58407(-)	59544	WP_012257687.1	type I restriction endonuclease subunit R	98.1	33.9	51.5
MGA_51	LOCUS_00510	sequence1:59503..60246(-)	frameshift,internal_stop_codon	60379..60381(-)	59544	WP_002858356.1	type I restriction endonuclease subunit R	96.0	23.3	50.2
MGA_52	LOCUS_00520	sequence1:60501..61127(-)	partial			WP_164926902.1	restriction endonuclease subunit S	97.6	44.5	26.3
MGA_60	LOCUS_00600	sequence1:68415..69683(+)	partial			WP_003899494.1	type III-A CRISPR-associated CARF protein Csm6	49.5	49.6	31.9
MGA_63	LOCUS_00620	sequence1:71607..73133(+)	partial			WP_211850673.1	RNA-directed DNA polymerase	31.3	27.2	30.2
MGA_85	LOCUS_00840	sequence1:93632..94984(-)	internal_stop_codon	95057..95059(-)		WP_000291840.1	oleate hydratase	100.0	76.1	95.6
MGA_86	LOCUS_00850	sequence1:95057..95407(-)	internal_stop_codon	95057..95059(-)		WP_000291840.1	oleate hydratase	100.0	19.6	94.8
MGA_129	LOCUS_01280	sequence1:140693..140887(+)	partial			WP_000469833.1	XRE family transcriptional regulator	100.0	16.4	96.9
MGA_141	LOCUS_01400	sequence1:153964..154521(+)	partial			WP_002294234.1	chorismate mutase	48.6	32.9	48.4
MGA_181	LOCUS_01800	sequence1:206494..207402(+)	partial			WP_001796914.1	ABC transporter permease	100.0	61.4	86.1
MGA_212	LOCUS_02110	sequence1:248741..249298(-)	partial			WP_005808295.1	TetR/AcrR family transcriptional regulator	33.5	30.4	51.6
MGA_374	LOCUS_03730	sequence1:416952..417155(+)	frameshift,internal_stop_codon	417168..417170(+)	417149	WP_001293076.1	terminase small subunit	85.1	30.2	87.7
MGA_522	LOCUS_05150	sequence1:588959..592111(+)	partial			WP_001060462.1	MSCRAMM family adhesin SdrC	68.4	75.2	87.9
MGA_554	LOCUS_05470	sequence1:630274..630615(+)	partial			WP_000798967.1	DUF1450 domain-containing protein	69.0	69.0	100.0
MGA_577	LOCUS_05700	sequence1:653619..654116(-)	internal_stop_codon	654135..654137(-)		WP_001557159.1	DMT family transporter	87.9	46.9	79.3
MGA_578	LOCUS_05710	sequence1:654135..654548(-)	internal_stop_codon	654135..654137(-)		WP_001557159.1	DMT family transporter	100.0	44.3	81.8
MGA_592	LOCUS_05850	sequence1:666041..667033(-)	partial			WP_024666576.1	YqcI/YcgG family protein	54.8	70.0	23.9
MGA_653	LOCUS_06460	sequence1:730154..730336(-)	internal_stop_codon	730406..730408(-),730457..730459(-)		WP_001801730.1	hypothetical protein	100.0	52.2	76.7
MGA_688	LOCUS_06810	sequence1:766780..767034(+)	partial			WP_001617169.1	hypothetical protein	40.5	73.5	77.8
MGA_745	LOCUS_07380	sequence1:833152..833301(+)	frameshift		833083	WP_000159787.1	transposase	83.7	45.6	75.6
MGA_750	LOCUS_07430	sequence1:837581..838405(+)	partial			WP_011087810.1	N-acyl homoserine lactonase family protein	72.6	65.9	25.1
MGA_752	LOCUS_07450	sequence1:839442..842672(+)	partial			WP_001056195.1	MSCRAMM family adhesin clumping factor ClfA	52.8	56.5	70.4
MGA_901	LOCUS_08940	sequence1:995806..996018(-)	partial			WP_001788574.1	NINE protein	100.0	72.9	82.9
MGA_902	LOCUS_08950	sequence1:996183..996323(+)	frameshift		996311	WP_000620949.1	GNAT family N-acetyltransferase	93.5	23.5	76.7
MGA_903	LOCUS_08960	sequence1:996418..996735(+)	frameshift		996311	WP_000620949.1	GNAT family N-acetyltransferase	100.0	57.4	84.8
MGA_938	LOCUS_09310	sequence1:1036595..1037131(-)	partial			WP_000273253.1	energy-coupling factor transporter transmembrane protein EcfT	100.0	66.4	91.0
MGA_977	LOCUS_09700	sequence1:1078350..1079261(-)	frameshift		1079262	WP_001548380.1	heme A synthase	99.7	84.8	92.7
MGA_1070	LOCUS_10630	sequence1:1178218..1178421(-)	partial			WP_001548522.1	TM2 domain-containing protein	100.0	72.8	92.5
MGA_1095	LOCUS_10880	sequence1:1204887..1205231(-)	frameshift,internal_stop_codon	1205270..1205272(-)	1205473	WP_126475239.1	IS1182 family transposase	99.1	20.7	97.3
MGA_1096	LOCUS_10890	sequence1:1205336..1206199(-)	frameshift,internal_stop_codon	1205270..1205272(-)	1205476	WP_126475239.1	IS1182 family transposase	91.3	49.4	86.6
MGA_1101	LOCUS_10940	sequence1:1209184..1210617(-)	partial			WP_000915238.1	lipoteichoic acid-specific glycosyltransferase YfhO	100.0	55.0	77.4
MGA_1215	LOCUS_12080	sequence1:1338064..1338279(-)	partial			WP_000093025.1	hypothetical protein	91.5	48.1	60.0
MGA_1279	LOCUS_12720	sequence1:1411173..1411994(+)	frameshift		1411859	WP_126475239.1	IS1182 family transposase	95.2	47.7	84.2
MGA_1280	LOCUS_12730	sequence1:1412012..1412818(+)	frameshift		1411862	WP_126475239.1	IS1182 family transposase	100.0	49.2	96.6
MGA_1296	LOCUS_12890	sequence1:1423843..1437228(-)	partial			WP_080388512.1	hyperosmolarity resistance protein Ebh	99.9	44.9	36.1
MGA_1348	LOCUS_13410	sequence1:1493956..1494504(-)	frameshift		1494602	WP_001557355.1	DUF1672 domain-containing protein	100.0	59.1	95.6
MGA_1349	LOCUS_13420	sequence1:1494591..1494821(-)	frameshift		1494602	WP_001557355.1	DUF1672 domain-containing protein	96.1	23.7	91.8
MGA_1371	LOCUS_13640	sequence1:1516213..1516809(-)	partial			WP_001283968.1	winged helix-turn-helix transcriptional regulator	97.0	51.3	33.9
MGA_1437	LOCUS_14300	sequence1:1576329..1576505(-)	partial			WP_000048060.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1513	LOCUS_15060	sequence1:1650749..1651219(-)	partial			WP_000261115.1	A24 family peptidase	100.0	66.4	61.5
MGA_1538	LOCUS_15310	sequence1:1679628..1680107(-)	frameshift,internal_stop_codon	1680114..1680116(-),1679535..1679537(-),1680396..1680398(-)	1679552,1679651	WP_126475239.1	IS1182 family transposase	97.5	28.8	93.6
MGA_1539	LOCUS_15320	sequence1:1680114..1680305(-)	internal_stop_codon	1680114..1680116(-),1680396..1680398(-)		WP_126475239.1	IS1182 family transposase	100.0	11.6	96.8
MGA_1540	LOCUS_15330	sequence1:1680396..1680617(-)	frameshift,internal_stop_codon	1680114..1680116(-),1680396..1680398(-)	1680615	WP_126475239.1	IS1182 family transposase	97.3	13.0	88.7
MGA_1541	LOCUS_15340	sequence1:1680592..1680831(-)	frameshift,internal_stop_codon	1680396..1680398(-)	1680615	WP_126475239.1	IS1182 family transposase	94.9	13.8	92.0
MGA_1545	LOCUS_15380	sequence1:1685635..1686156(-)	partial			WP_000849428.1	hypothetical protein	100.0	34.9	81.5
MGA_1564	LOCUS_15570	sequence1:1700021..1700470(+)	frameshift		1699938	WP_055164393.1	IS30 family transposase	87.9	42.7	39.3
MGA_1565	LOCUS_15580	sequence1:1700667..1701626(-)	partial			WP_000849428.1	hypothetical protein	99.4	64.0	89.0
MGA_1595	LOCUS_15880	sequence1:1738202..1738684(-)	partial			WP_126475239.1	IS1182 family transposase	86.9	26.2	90.2
MGA_1676	LOCUS_16690	sequence1:1832651..1833103(-)	partial			WP_000755747.1	DUF1433 domain-containing protein	70.7	77.2	30.8
MGA_1677	LOCUS_16700	sequence1:1833141..1834751(+)	partial			WP_009933212.1	hypothetical protein	30.2	46.2	29.6
MGA_1682	LOCUS_16750	sequence1:1839468..1839710(-)	partial			WP_000586140.1	hypothetical protein	100.0	34.5	90.0
MGA_1685	LOCUS_16780	sequence1:1841284..1841559(-)	internal_stop_codon	1841626..1841628(-)		WP_000782463.1	bi-component leukocidin LukED subunit D	85.7	23.9	87.2
MGA_1687	LOCUS_16800	sequence1:1844006..1845352(+)	partial			WP_011860984.1	DUF4041 domain-containing protein	86.8	70.8	33.5
MGA_1693	LOCUS_16860	sequence1:1848246..1848557(+)	frameshift		1848225,1848534	WP_000857191.1	site-specific integrase	93.2	27.8	30.2
MGA_1694	LOCUS_16870	sequence1:1848571..1848906(+)	frameshift,internal_stop_codon	1848904..1848906(+)	1848512	WP_096810449.1	site-specific integrase	99.1	31.0	33.6
MGA_1768	LOCUS_17560	sequence1:1927741..1927902(-)	frameshift,internal_stop_codon	1927971..1927973(-),1927740..1927742(-)	1927982	WP_084146450.1	carboxylesterase/lipase family protein	100.0	10.7	41.9
MGA_1812	LOCUS_18000	sequence1:1972419..1972619(-)	partial			WP_000671712.1	MAP domain-containing protein	100.0	68.8	59.1
MGA_1813	LOCUS_18010	sequence1:1972740..1973834(-)	internal_stop_codon	1972740..1972742(-)		WP_001557458.1	extracellular adherence protein Eap/Map	98.9	76.3	57.6
MGA_1830	LOCUS_18180	sequence1:1990966..1991106(-)	partial			WP_072050172.1	Ig-like domain-containing protein	100.0	62.2	97.8
MGA_1847	LOCUS_18350	sequence1:2000294..2000482(-)	partial			WP_000195784.1	DUF1381 domain-containing protein	79.0	72.1	91.8
MGA_1851	LOCUS_18390	sequence1:2002104..2002451(-)	partial			WP_072467505.1	acetyltransferase	36.5	35.5	69.0
MGA_1861	LOCUS_18490	sequence1:2007181..2007642(-)	internal_stop_codon	2007754..2007756(-)		WP_000700557.1	AAA family ATPase	100.0	23.6	93.5
MGA_1862	LOCUS_18500	sequence1:2007754..2009130(-)	internal_stop_codon	2007754..2007756(-)		WP_000700554.1	AAA family ATPase	99.6	70.5	95.2
MGA_1884	LOCUS_18720	sequence1:2024214..2024489(+)	frameshift,internal_stop_codon	2024215..2024217(+),2024200..2024202(+),2024131..2024133(+)	2024244	WP_000179343.1	tyrosine-type recombinase/integrase	69.2	15.6	58.7
MGA_1888	LOCUS_18760	sequence1:2027463..2028683(-)	partial			WP_000120296.1	SdrH family protein	55.9	54.7	80.2
MGA_1915	LOCUS_19030	sequence1:2056709..2057002(+)	frameshift		2056969	WP_000531823.1	3-isopropylmalate dehydratase large subunit	94.8	20.2	94.6
MGA_1916	LOCUS_19040	sequence1:2057004..2058080(+)	frameshift		2056969	WP_000531823.1	3-isopropylmalate dehydratase large subunit	100.0	78.5	95.3
MGA_2012	LOCUS_19980	sequence1:2156134..2156436(-)	partial			WP_158908668.1	HsdR family type I site-specific deoxyribonuclease	92.0	15.0	48.9
MGA_2017	LOCUS_20030	sequence1:2158427..2158951(-)	frameshift		2158965	WP_016117865.1	TnsD family Tn7-like transposition protein	90.8	25.9	29.9
MGA_2018	LOCUS_20040	sequence1:2158948..2159892(-)	frameshift		2158968	WP_016117865.1	TnsD family Tn7-like transposition protein	92.4	46.3	28.9
MGA_2021	LOCUS_20070	sequence1:2160795..2161865(-)	frameshift,internal_stop_codon	2161933..2161935(-)	2161860	WP_016117864.1	ATP-binding protein	98.3	62.3	31.7
MGA_2023	LOCUS_20090	sequence1:2162393..2163037(+)	partial			WP_001059647.1	ISL3 family transposase	99.5	48.4	45.1
MGA_2078	LOCUS_20620	sequence1:2235392..2236711(-)	partial			WP_000181735.1	ATP-dependent helicase	99.3	72.2	35.1
MGA_2079	LOCUS_20630	sequence1:2236756..2237229(-)	partial			WP_000470932.1	AAA family ATPase	87.3	20.5	40.3
MGA_2216	LOCUS_22000	sequence1:2356827..2357117(+)	internal_stop_codon	2356713..2356715(+)		WP_126475239.1	IS1182 family transposase	88.5	15.6	92.9
MGA_2217	LOCUS_22010	sequence1:2357071..2357541(+)	frameshift,internal_stop_codon	2357524..2357526(+)	2357511	WP_126475239.1	IS1182 family transposase	99.4	28.4	92.9
MGA_2224	LOCUS_22080	sequence1:2365375..2366001(+)	partial			WP_001549718.1	YdcF family protein	99.5	64.3	83.1
MGA_2357	LOCUS_23410	sequence1:2509481..2509651(-)	partial			WP_001795286.1	hypothetical protein	100.0	72.7	83.9
MGA_2466	LOCUS_24500	sequence1:2632498..2632746(+)	frameshift		2632444	WP_001791980.1	hypothetical protein	98.8	74.3	71.6
MGA_2473	LOCUS_24570	sequence1:2640318..2641004(-)	partial			WP_003894962.1	MBL fold metallo-hydrolase	68.4	77.9	29.6
MGA_2487	LOCUS_24710	sequence1:2657618..2657845(-)	partial			WP_000160701.1	AAA family ATPase	98.7	27.3	87.8
MGA_2488	LOCUS_24720	sequence1:2657853..2658212(+)	partial			WP_126475239.1	IS1182 family transposase	92.4	20.2	96.4
MGA_2498	LOCUS_24820	sequence1:2666481..2669333(-)	partial			WP_000745891.1	MSCRAMM family adhesin clumping factor ClfB	60.3	62.9	84.5
MGA_2523	LOCUS_25070	sequence1:2703944..2704336(-)	partial			WP_000044547.1	serine-rich repeat glycoprotein adhesin SasA	80.0	4.3	50.0
MGA_2524	LOCUS_25080	sequence1:2704233..2704577(+)	internal_stop_codon	2704845..2704847(+),2704227..2704229(+),2704575..2704577(+)		WP_002485492.1	hypothetical protein	91.2	19.6	41.9
MGA_2526	LOCUS_25100	sequence1:2704881..2705501(+)	internal_stop_codon	2704845..2704847(+),2705499..2705501(+)		WP_235601755.1	hypothetical protein	99.5	20.5	40.7
MGA_2527	LOCUS_25110	sequence1:2705685..2706419(+)	internal_stop_codon	2706597..2706599(+),2706495..2706497(+),2705499..2705501(+),2706417..2706419(+),2706567..2706569(+)		WP_002485492.1	hypothetical protein	68.0	33.5	39.4
MGA_2529	LOCUS_25130	sequence1:2707005..2707673(+)	internal_stop_codon	2707671..2707673(+),2706933..2706935(+),2707803..2707805(+)		WP_002485492.1	hypothetical protein	89.2	35.4	39.0
MGA_2530	LOCUS_25140	sequence1:2707935..2708459(+)	internal_stop_codon	2707671..2707673(+),2707803..2707805(+),2708457..2708459(+)		WP_002485492.1	hypothetical protein	67.8	20.3	38.9
MGA_2537	LOCUS_25210	sequence1:2715348..2715557(+)	partial			WP_001260044.1	hypothetical protein	66.7	46.0	65.2
MGA_2539	LOCUS_25230	sequence1:2716683..2718776(+)	partial			WP_001260044.1	hypothetical protein	10.3	72.0	94.4
MGA_2553	LOCUS_25370	sequence1:2731685..2732317(-)	frameshift		2732328	WP_000592610.1	imidazole glycerol phosphate synthase subunit HisF	100.0	45.5	95.2
MGA_2594	LOCUS_25780	sequence1:2768894..2769031(-)	partial			WP_000240855.1	50S ribosomal protein L34	60.0	60.0	100.0
MGA_2598	LOCUS_25810	sequence2:3172..4944(-)	partial			WP_009994769.1	RNA-directed DNA polymerase	58.8	61.9	25.5
MGA_2602	LOCUS_25850	sequence2:8827..9543(+)	partial			WP_002322009.1	protein rep	82.8	64.4	56.3
MGA_2606	LOCUS_25890	sequence2:12433..12612(-)	partial			WP_011222005.1	protein rep	94.9	16.9	42.9
