# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_7	LOCUS_00070	sequence1:6387..7424(-)	frameshift,internal_stop_codon	7533..7535(-)	6434	WP_000790712.1	Mu transposase C-terminal domain-containing protein	95.7	68.8	97.3
MGA_8	LOCUS_00080	sequence1:7533..7808(-)	internal_stop_codon	7533..7535(-)		WP_011117505.1	DDE-type integrase/transposase/recombinase	100.0	19.0	92.3
MGA_12	LOCUS_00120	sequence1:10055..10483(+)	internal_stop_codon	9893..9895(+)		WP_107520841.1	recombinase family protein	100.0	70.3	95.1
MGA_35	LOCUS_00350	sequence2:10321..10572(+)	frameshift,internal_stop_codon	10116..10118(+),10314..10316(+)	10319	WP_007083038.1	IS1182 family transposase	38.6	15.7	84.4
MGA_48	LOCUS_00480	sequence2:25501..25620(-)	frameshift		25506	WP_000124880.1	glycosyltransferase	92.3	9.1	61.1
MGA_67	LOCUS_00670	sequence2:46327..46950(+)	partial			WP_049387528.1	hypothetical protein	72.0	66.5	31.8
MGA_78	LOCUS_00780	sequence2:58535..59167(+)	frameshift		59152	WP_000940790.1	type 8 capsular polysaccharide synthesis protein Cap8D	100.0	34.6	64.8
MGA_79	LOCUS_00790	sequence2:59245..60348(+)	frameshift		59158	WP_000940790.1	type 8 capsular polysaccharide synthesis protein Cap8D	97.8	59.5	73.4
MGA_91	LOCUS_00910	sequence2:70389..71375(+)	partial			WP_011021092.1	phenylacetate--CoA ligase family protein	97.9	74.4	24.9
MGA_97	LOCUS_00970	sequence2:76432..76968(-)	frameshift,internal_stop_codon	77002..77004(-)	76500	WP_129868248.1	IS3 family transposase	87.1	33.2	52.8
MGA_98	LOCUS_00980	sequence2:77002..77265(-)	frameshift,internal_stop_codon	77001..77003(-)	77369	WP_140860145.1	IS3 family transposase	98.9	18.0	45.3
MGA_101	LOCUS_01010	sequence2:78576..79562(+)	partial			WP_000557907.1	5-methylcytosine-specific endonuclease McrA	22.6	26.7	48.6
MGA_109	LOCUS_01090	sequence2:88677..89351(-)	partial			WP_005769303.1	HPr kinase	57.6	28.5	30.2
MGA_114	LOCUS_01140	sequence2:96431..98476(+)	partial			WP_011202675.1	DEAD/DEAH box helicase family protein	99.0	45.7	40.9
MGA_116	LOCUS_01160	sequence2:98697..99509(-)	partial			WP_010989596.1	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	63.7	38.1	31.4
MGA_117	LOCUS_01170	sequence2:100822..108351(+)	partial			WP_011082576.1	accumulation-associated protein Aap	25.8	42.1	44.2
MGA_123	LOCUS_01230	sequence2:112417..112659(+)	partial			WP_003242607.1	NADP-dependent oxidoreductase	85.0	20.1	61.8
MGA_124	LOCUS_01240	sequence2:113044..113343(+)	internal_stop_codon	113341..113343(+),112996..112998(+)		WP_002455937.1	hypothetical protein	99.0	60.9	71.4
MGA_139	LOCUS_01390	sequence2:123425..124540(-)	partial			WP_002437845.1	YSIRK domain-containing triacylglycerol lipase GehC	90.6	50.7	23.1
MGA_148	LOCUS_01480	sequence2:134082..134330(-)	internal_stop_codon	134349..134351(-)		WP_003549922.1	PTS beta-glucoside transporter subunit IIBCA	98.8	13.3	43.4
MGA_152	LOCUS_01520	sequence2:139736..140080(-)	partial			WP_083485680.1	metalloregulator ArsR/SmtB family transcription factor	73.7	79.2	41.7
MGA_167	LOCUS_01670	sequence2:156334..156585(-)	internal_stop_codon	156688..156690(-)		WP_001106006.1	IS6-like element IS257 family transposase	100.0	37.1	100.0
MGA_168	LOCUS_01680	sequence2:156688..157008(-)	internal_stop_codon	156688..156690(-)		WP_001105984.1	IS6-like element IS257 family transposase	100.0	47.3	98.1
MGA_173	LOCUS_01730	sequence2:159791..160306(-)	partial			WP_001829504.1	MIP/aquaporin family protein	98.2	61.3	69.6
MGA_184	LOCUS_01840	sequence2:173110..173334(-)	partial			WP_011222005.1	protein rep	93.2	21.0	39.1
MGA_190	LOCUS_01900	sequence2:177841..178035(-)	frameshift,internal_stop_codon	178074..178076(-),178182..178184(-),178071..178073(-),177840..177842(-)	177836,178046,177815	WP_031837637.1	recombinase family protein	100.0	35.0	73.4
MGA_205	LOCUS_02050	sequence2:188730..189455(-)	frameshift		189494	WP_165447207.1	MFS transporter	97.5	52.3	24.2
MGA_213	LOCUS_02130	sequence2:194802..196466(-)	partial			WP_011108297.1	FAD-dependent oxidoreductase	97.1	65.5	38.7
MGA_220	LOCUS_02200	sequence2:200610..201059(-)	partial			WP_145115862.1	DUF536 domain-containing protein	98.0	61.0	77.6
MGA_250	LOCUS_02500	sequence2:228438..228668(-)	partial			WP_002322009.1	protein rep	56.6	14.1	60.5
MGA_251	LOCUS_02510	sequence2:228613..229098(-)	partial			WP_075141044.1	replication initiator protein A	95.7	49.4	90.9
MGA_260	LOCUS_02600	sequence2:237334..238767(+)	partial			WP_000678077.1	YhgE/Pip family protein	52.6	24.6	32.7
MGA_274	LOCUS_02740	sequence2:251539..251961(+)	partial			WP_011389341.1	YbfB/YjiJ family MFS transporter	88.6	31.2	32.3
MGA_279	LOCUS_02790	sequence2:255041..255931(+)	frameshift		254972	WP_000736784.1	glycine-glycine endopeptidase LytM	99.7	77.8	44.0
MGA_291	LOCUS_02910	sequence2:267787..267972(+)	internal_stop_codon	267970..267972(+)		WP_001191954.1	NAD-dependent deacetylase	100.0	20.4	62.5
MGA_292	LOCUS_02920	sequence2:267985..268671(+)	internal_stop_codon	267970..267972(+)		WP_001191954.1	NAD-dependent deacetylase	97.4	70.7	72.5
MGA_295	LOCUS_02950	sequence2:271146..271595(-)	partial			WP_003395562.1	2-keto-3-deoxygluconate permease	91.9	35.2	37.0
MGA_329	LOCUS_03290	sequence2:313999..314229(+)	partial			WP_001084442.1	ornithine--oxo-acid transaminase	96.1	18.5	61.6
MGA_330	LOCUS_03300	sequence2:314298..315029(+)	partial			WP_000682619.1	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	100.0	58.8	62.1
MGA_336	LOCUS_03360	sequence2:321586..322233(+)	frameshift		322185	WP_003246197.1	MFS transporter	89.3	44.1	56.8
MGA_337	LOCUS_03370	sequence2:322218..322841(+)	frameshift		322182	WP_003231439.1	MFS transporter	97.1	48.3	49.3
MGA_339	LOCUS_03390	sequence2:324629..325003(+)	internal_stop_codon	325001..325003(+)		WP_000838205.1	glucose-specific PTS transporter subunit IIBC	100.0	24.4	78.2
MGA_340	LOCUS_03400	sequence2:325007..326167(+)	internal_stop_codon	325001..325003(+)		WP_000838205.1	glucose-specific PTS transporter subunit IIBC	98.7	74.9	81.6
MGA_364	LOCUS_03640	sequence2:348969..349250(+)	frameshift		348891	WP_003242768.1	carboxymuconolactone decarboxylase family protein	95.7	60.5	59.6
MGA_368	LOCUS_03680	sequence2:350946..351257(+)	internal_stop_codon	351255..351257(+)		WP_000954799.1	FAD-binding oxidoreductase	100.0	27.0	67.0
MGA_369	LOCUS_03690	sequence2:351279..352091(+)	internal_stop_codon	351255..351257(+)		WP_001832143.1	globin domain-containing protein	100.0	70.9	54.1
MGA_372	LOCUS_03720	sequence2:354668..355348(+)	frameshift		355333	WP_000887022.1	BglG family transcription antiterminator	98.2	35.6	43.0
MGA_373	LOCUS_03730	sequence2:355345..356529(+)	frameshift		355330	WP_002437911.1	BglG family transcription antiterminator	99.0	63.1	49.4
MGA_379	LOCUS_03790	sequence2:362301..362789(-)	internal_stop_codon	362892..362894(-)		WP_145108765.1	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	98.1	37.9	62.8
MGA_380	LOCUS_03800	sequence2:362892..363581(-)	internal_stop_codon	362892..362894(-)		WP_041272631.1	homocysteine synthase	100.0	53.4	69.0
MGA_398	LOCUS_03980	sequence2:379040..379444(+)	internal_stop_codon	379442..379444(+)		WP_000469951.1	ABC transporter permease	98.5	40.2	53.8
MGA_399	LOCUS_03990	sequence2:379454..380020(+)	internal_stop_codon	379442..379444(+)		WP_001831013.1	ABC transporter permease	91.0	51.4	64.9
MGA_436	LOCUS_04360	sequence2:418400..418837(+)	partial			WP_002456715.1	DUF4064 domain-containing protein	89.0	63.3	27.1
MGA_451	LOCUS_04510	sequence2:440780..441064(+)	frameshift		441052	WP_000711547.1	Na+/H+ antiporter NhaC	97.9	19.5	55.4
MGA_452	LOCUS_04520	sequence2:441124..441930(+)	frameshift		441841,441052	WP_000711547.1	Na+/H+ antiporter NhaC	89.2	50.5	61.1
MGA_453	LOCUS_04530	sequence2:441831..442148(+)	frameshift		441840	WP_000711525.1	Na+/H+ antiporter NhaC	85.7	19.0	67.8
MGA_479	LOCUS_04790	sequence2:469853..470173(+)	internal_stop_codon	470171..470173(+)		WP_015706071.1	RbtT/DalT/CsbX family MFS transporter	89.6	22.4	44.2
MGA_480	LOCUS_04800	sequence2:470189..471148(+)	internal_stop_codon	470171..470173(+)		WP_015706071.1	RbtT/DalT/CsbX family MFS transporter	95.0	71.5	43.1
MGA_491	LOCUS_04910	sequence2:481511..481816(+)	frameshift		481795	WP_000665727.1	sodium:solute symporter	100.0	19.8	86.1
MGA_492	LOCUS_04920	sequence2:481827..483056(+)	frameshift		481798	WP_000665727.1	sodium:solute symporter	97.3	78.2	78.9
MGA_497	LOCUS_04970	sequence2:487676..487864(+)	frameshift		487631	WP_011101957.1	ABC transporter transmembrane domain-containing protein	75.8	8.1	51.1
MGA_502	LOCUS_05020	sequence2:492784..492942(-)	frameshift		492804	WP_002456035.1	aldehyde dehydrogenase	86.5	9.5	66.7
MGA_510	LOCUS_05100	sequence2:502007..502216(-)	partial			WP_001831584.1	DedA family protein	95.7	32.4	62.1
MGA_513	LOCUS_05130	sequence2:502983..503627(+)	frameshift		503594	WP_002438175.1	MFS transporter	95.3	48.1	77.9
MGA_514	LOCUS_05140	sequence2:503606..504271(+)	frameshift		503597	WP_002438175.1	MFS transporter	99.5	51.2	64.1
MGA_531	LOCUS_05310	sequence2:524006..525154(-)	internal_stop_codon	525254..525256(-)		WP_012775582.1	glycoside hydrolase family 3 N-terminal domain-containing protein	100.0	66.6	67.5
MGA_532	LOCUS_05320	sequence2:525254..525730(-)	internal_stop_codon	525254..525256(-)		WP_012775582.1	glycoside hydrolase family 3 N-terminal domain-containing protein	98.1	26.8	63.2
MGA_539	LOCUS_05390	sequence2:530253..530882(-)	frameshift		530893	WP_000592610.1	imidazole glycerol phosphate synthase subunit HisF	97.6	44.2	69.6
MGA_583	LOCUS_05830	sequence2:574138..574449(+)	frameshift,internal_stop_codon	574498..574500(+)	574425	WP_000414695.1	multidrug efflux MFS transporter NorB	91.3	20.3	67.0
MGA_584	LOCUS_05840	sequence2:574614..575531(+)	frameshift,internal_stop_codon	574498..574500(+)	574443	WP_001831421.1	MFS transporter	99.7	65.9	59.0
MGA_591	LOCUS_05910	sequence2:580879..581127(-)	internal_stop_codon	580879..580881(-)		WP_011837076.1	GNAT family N-acetyltransferase	96.3	48.5	37.8
MGA_613	LOCUS_06130	sequence2:598999..599430(-)	partial			WP_003573966.1	Hsp20/alpha crystallin family protein	74.8	68.4	43.5
MGA_614	LOCUS_06140	sequence2:599472..599843(-)	partial			WP_003573966.1	Hsp20/alpha crystallin family protein	70.7	56.3	34.8
MGA_629	LOCUS_06290	sequence2:616221..616607(+)	internal_stop_codon	616605..616607(+)		WP_011969460.1	bifunctional sugar-binding transcriptional regulator/dihydroxyacetone kinase subunit DhaK	96.1	17.7	51.2
MGA_630	LOCUS_06300	sequence2:616731..617219(+)	internal_stop_codon	616605..616607(+)		WP_013533065.1	dihydroxyacetone kinase subunit DhaK	97.5	47.2	47.5
MGA_633	LOCUS_06330	sequence2:618716..619609(+)	frameshift		619603	WP_002444002.1	copper resistance protein CopC	99.7	71.2	44.3
MGA_634	LOCUS_06340	sequence2:619630..619965(+)	frameshift		619603	WP_002444002.1	copper resistance protein CopC	92.8	24.8	49.5
MGA_644	LOCUS_06440	sequence2:628360..629160(+)	partial			WP_000827010.1	hypothetical protein	41.4	53.9	50.0
MGA_818	LOCUS_08180	sequence2:795788..796390(+)	internal_stop_codon	796388..796390(+)		WP_001829764.1	alanine/ornithine racemase family PLP-dependent enzyme	99.5	56.4	60.3
MGA_819	LOCUS_08190	sequence2:796391..796849(+)	internal_stop_codon	796388..796390(+)		WP_001829764.1	alanine/ornithine racemase family PLP-dependent enzyme	91.4	39.4	61.9
MGA_823	LOCUS_08230	sequence2:799370..799960(+)	partial			WP_001829779.1	iron chelate uptake ABC transporter family permease subunit	100.0	61.1	69.4
MGA_865	LOCUS_08650	sequence2:848999..849802(+)	internal_stop_codon	849800..849802(+)		WP_000183717.1	hypothetical protein	97.0	65.2	68.0
MGA_866	LOCUS_08660	sequence2:849818..850192(+)	internal_stop_codon	849800..849802(+)		WP_000183717.1	hypothetical protein	99.2	31.0	64.2
MGA_871	LOCUS_08710	sequence2:853483..854025(+)	partial			WP_000701483.1	DNA-directed RNA polymerase subunit delta	71.7	73.3	75.2
MGA_891	LOCUS_08910	sequence2:873592..873942(+)	frameshift,internal_stop_codon	873510..873512(+),873531..873533(+)	873560	WP_001801792.1	ATP synthase subunit I	97.4	75.3	54.0
MGA_960	LOCUS_09600	sequence2:945875..947785(+)	partial			WP_049387514.1	MSCRAMM-like protein SdrH	57.5	84.3	34.2
MGA_1002	LOCUS_10020	sequence2:991816..992124(+)	internal_stop_codon	992122..992124(+)		WP_000548781.1	DUF3267 domain-containing protein	100.0	58.0	39.2
MGA_1056	LOCUS_10550	sequence2:1050061..1050189(-)	frameshift		1050063	WP_000832687.1	IS3 family transposase	100.0	14.8	61.9
MGA_1065	LOCUS_10640	sequence2:1059858..1060346(-)	frameshift		1059929,1059758	WP_002301552.1	IS3 family transposase	82.1	48.9	41.4
MGA_1098	LOCUS_10960	sequence2:1088447..1089049(-)	frameshift,internal_stop_codon	1089092..1089094(-)	1089179,1089207	WP_129868248.1	IS3 family transposase	97.5	41.7	43.4
MGA_1144	LOCUS_11420	sequence2:1142327..1142584(+)	frameshift		1142539	WP_000276367.1	N-acetylglucosamine-specific PTS transporter subunit IIBC	83.5	14.5	71.8
MGA_1145	LOCUS_11430	sequence2:1142551..1143822(+)	frameshift		1142539	WP_002456458.1	N-acetylglucosamine-specific PTS transporter subunit IIBC	99.1	84.5	67.5
MGA_1179	LOCUS_11770	sequence2:1181979..1182149(+)	partial			WP_135351025.1	transposase	100.0	42.7	73.2
MGA_1281	LOCUS_12790	sequence2:1285591..1286142(+)	frameshift		1286136	WP_001830931.1	helix-hairpin-helix domain-containing protein	84.2	62.5	37.7
MGA_1282	LOCUS_12800	sequence2:1286178..1286324(+)	frameshift		1286139	WP_011101662.1	helix-hairpin-helix domain-containing protein	100.0	19.9	52.1
MGA_1284	LOCUS_12820	sequence2:1287032..1287871(+)	frameshift		1287829,1287967	WP_000953300.1	DNA internalization-related competence protein ComEC/Rec2	90.7	33.8	32.8
MGA_1285	LOCUS_12830	sequence2:1288251..1289096(+)	frameshift		1288091,1288055	WP_011082702.1	DNA internalization-related competence protein ComEC/Rec2	97.9	37.3	44.4
MGA_1296	LOCUS_12940	sequence2:1300601..1300795(+)	frameshift		1300768	WP_000108668.1	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB	89.1	12.7	93.0
MGA_1297	LOCUS_12950	sequence2:1300813..1301463(+)	frameshift		1300768,1301455	WP_001831098.1	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB	99.1	47.8	91.1
MGA_1298	LOCUS_12960	sequence2:1301624..1301947(+)	frameshift		1301454	WP_001831098.1	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB	100.0	23.9	67.3
MGA_1299	LOCUS_12970	sequence2:1302122..1302298(+)	partial			WP_000048060.1	30S ribosomal protein S21	74.1	74.1	95.3
MGA_1331	LOCUS_13290	sequence2:1331165..1331872(+)	frameshift		1331806	WP_001831131.1	competence type IV pilus assembly protein ComGB	98.3	65.1	39.0
MGA_1332	LOCUS_13300	sequence2:1331869..1332231(+)	frameshift		1331809	WP_000776422.1	competence type IV pilus assembly protein ComGB	100.0	33.7	45.8
MGA_1342	LOCUS_13400	sequence2:1339032..1339373(+)	frameshift,internal_stop_codon	1338931..1338933(+)	1338987,1338891,1338852,1339222	WP_002494449.1	IS1182-like element ISSep1 family transposase	64.6	13.1	67.1
MGA_1354	LOCUS_13520	sequence2:1347639..1347884(+)	partial			WP_001830935.1	exodeoxyribonuclease VII small subunit	71.6	76.3	82.8
MGA_1359	LOCUS_13570	sequence2:1351293..1352195(+)	partial			WP_004524980.1	bifunctional enoyl-CoA hydratase/phosphate acetyltransferase	67.7	43.9	33.2
MGA_1388	LOCUS_13860	sequence2:1383006..1384625(+)	partial			WP_000069289.1	elastin-binding protein EbpS	24.1	27.0	38.9
MGA_1433	LOCUS_14310	sequence2:1430783..1431040(+)	partial			WP_000404645.1	virulence factor	98.8	22.5	51.2
MGA_1455	LOCUS_14530	sequence2:1451306..1451665(+)	internal_stop_codon	1451663..1451665(+)		WP_015776043.1	sugar phosphate isomerase/epimerase	95.8	37.9	41.2
MGA_1458	LOCUS_14560	sequence2:1453145..1454050(+)	internal_stop_codon	1454048..1454050(+)		WP_015776250.1	Gfo/Idh/MocA family oxidoreductase	97.0	74.9	55.5
MGA_1459	LOCUS_14570	sequence2:1454090..1454290(+)	internal_stop_codon	1454048..1454050(+)		WP_015776250.1	Gfo/Idh/MocA family oxidoreductase	97.0	16.7	50.8
MGA_1483	LOCUS_14810	sequence2:1476044..1476784(-)	frameshift		1476145	WP_011100923.1	aldo/keto reductase	85.8	76.4	63.0
MGA_1495	LOCUS_14930	sequence2:1490382..1490537(-)	frameshift		1490384	WP_000229037.1	cyclopropane-fatty-acyl-phospholipid synthase	86.3	11.3	45.5
MGA_1519	LOCUS_15170	sequence2:1514419..1515123(-)	internal_stop_codon	1515211..1515213(-)		WP_000866395.1	IS3 family transposase	98.3	79.5	40.9
MGA_1559	LOCUS_15570	sequence2:1560810..1561514(-)	internal_stop_codon	1561602..1561604(-)		WP_000866395.1	IS3 family transposase	98.3	79.5	40.9
MGA_1610	LOCUS_16080	sequence2:1616149..1616388(+)	frameshift,internal_stop_codon	1615997..1615999(+)	1616098	WP_095092556.1	IS1182 family transposase	92.4	13.0	64.4
MGA_1646	LOCUS_16440	sequence2:1660712..1661008(+)	internal_stop_codon	1660472..1660474(+)		WP_100067904.1	IS3-like element IS1661 family transposase	89.8	18.8	42.7
MGA_1704	LOCUS_17020	sequence2:1726255..1727145(-)	partial			WP_002470268.1	FtsQ-type POTRA domain-containing protein	99.7	63.5	55.9
MGA_1788	LOCUS_17860	sequence2:1812849..1813043(-)	partial			WP_225931040.1	IS3 family transposase	82.8	13.9	52.8
MGA_1833	LOCUS_18310	sequence2:1861191..1861352(+)	partial			WP_000857180.1	site-specific integrase	96.2	14.8	58.8
MGA_1866	LOCUS_18640	sequence2:1896063..1896647(-)	frameshift		1896083	WP_001829282.1	competence protein CoiA family protein	95.9	56.4	38.8
MGA_1928	LOCUS_19260	sequence2:1964086..1964352(-)	internal_stop_codon	1964374..1964376(-)		WP_000129659.1	D-alanine--poly(phosphoribitol) ligase subunit DltA	97.7	17.3	48.8
MGA_1929	LOCUS_19270	sequence2:1964374..1965549(-)	internal_stop_codon	1964374..1964376(-)		WP_001831977.1	D-alanine--poly(phosphoribitol) ligase subunit DltA	100.0	80.6	61.4
MGA_1948	LOCUS_19460	sequence2:1981314..1983770(-)	partial			WP_000582139.1	phage tail spike protein	27.5	18.3	40.4
MGA_1951	LOCUS_19490	sequence2:1986616..1991721(-)	partial			WP_001795393.1	phage tail tape measure protein	54.1	59.1	30.4
MGA_1965	LOCUS_19630	sequence2:2000385..2000699(-)	partial			WP_002286540.1	HNH endonuclease signature motif containing protein	72.1	62.3	38.7
MGA_1985	LOCUS_19830	sequence2:2007471..2008223(-)	partial			WP_011861353.1	DUF6017 domain-containing protein	51.2	40.5	41.9
MGA_1988	LOCUS_19860	sequence2:2009363..2010010(-)	partial			WP_002383799.1	ERF family protein	77.2	68.9	31.4
MGA_1995	LOCUS_19930	sequence2:2012211..2013023(-)	partial			WP_080518306.1	DUF3102 domain-containing protein	71.1	59.7	25.9
MGA_1997	LOCUS_19950	sequence2:2013469..2013801(+)	partial			WP_010922054.1	helix-turn-helix transcriptional regulator	66.4	28.9	65.8
MGA_2027	LOCUS_20250	sequence2:2036882..2037088(-)	partial			WP_001548522.1	TM2 domain-containing protein	94.1	69.6	71.9
MGA_2046	LOCUS_20440	sequence2:2050315..2050818(-)	frameshift		2050332	WP_001226326.1	glycerophosphodiester phosphodiesterase	73.7	41.7	56.5
MGA_2048	LOCUS_20460	sequence2:2051587..2051910(-)	internal_stop_codon	2051977..2051979(-)		WP_002455937.1	hypothetical protein	98.1	65.8	40.2
MGA_2051	LOCUS_20490	sequence2:2053748..2053909(+)	frameshift		2053903	WP_001041274.1	multidrug efflux MFS transporter NorA	88.7	12.1	55.3
MGA_2052	LOCUS_20500	sequence2:2054017..2054886(+)	frameshift		2053903	WP_001830321.1	multidrug efflux MFS transporter NorA	97.9	73.6	36.7
MGA_2058	LOCUS_20560	sequence2:2058744..2059148(+)	partial			WP_002485100.1	Ltp family lipoprotein	96.3	57.9	48.8
MGA_2069	LOCUS_20670	sequence2:2066776..2067486(+)	partial			WP_000747403.1	LPXTG cell wall anchor domain-containing protein	34.3	34.5	51.9
MGA_2100	LOCUS_20980	sequence2:2093846..2094508(-)	partial			WP_000070831.1	DUF4887 domain-containing protein	20.5	21.5	60.0
MGA_2107	LOCUS_21050	sequence2:2099156..2099440(-)	partial			WP_000664359.1	DUF1722 domain-containing protein	95.7	70.9	45.6
MGA_2119	LOCUS_21170	sequence2:2106897..2109239(-)	partial			WP_010714140.1	DNA primase family protein	61.3	60.1	50.2
MGA_2147	LOCUS_21450	sequence2:2136486..2137295(-)	frameshift		2137324	WP_171004420.1	DEAD/DEAH box helicase family protein	99.6	63.5	58.2
MGA_2148	LOCUS_21460	sequence2:2137304..2137753(-)	frameshift		2137324	WP_171004420.1	DEAD/DEAH box helicase family protein	91.3	32.2	48.5
MGA_2153	LOCUS_21510	sequence2:2142752..2143066(-)	frameshift,internal_stop_codon	2142538..2142540(-),2142682..2142684(-),2142610..2142612(-)	2142648,2142693	WP_194313290.1	IS1182 family transposase	95.2	18.4	71.7
MGA_2208	LOCUS_22060	sequence2:2203737..2204129(+)	partial			WP_002438866.1	DUF1361 domain-containing protein	97.7	62.0	54.3
MGA_2224	LOCUS_22220	sequence2:2218826..2219122(-)	internal_stop_codon	2219303..2219305(-)		WP_100067904.1	IS3-like element IS1661 family transposase	89.8	18.8	42.7
MGA_2229	LOCUS_22270	sequence2:2221686..2221898(-)	partial			WP_001832142.1	hypothetical protein	95.7	47.9	41.8
MGA_2240	LOCUS_22380	sequence2:2231223..2231519(-)	internal_stop_codon	2231700..2231702(-)		WP_100067904.1	IS3-like element IS1661 family transposase	89.8	18.8	42.7
MGA_2258	LOCUS_22560	sequence2:2246766..2247410(-)	frameshift		2247495	WP_002467644.1	dihydroxyacetone kinase subunit DhaK	99.1	66.2	67.0
MGA_2259	LOCUS_22570	sequence2:2247490..2247735(-)	frameshift		2247495	WP_002467644.1	dihydroxyacetone kinase subunit DhaK	98.8	25.0	75.0
MGA_2292	LOCUS_22900	sequence2:2280235..2280723(+)	frameshift		2280651	WP_002301552.1	IS3 family transposase	82.1	48.9	41.4
MGA_2293	LOCUS_22910	sequence2:2280645..2280941(+)	frameshift		2280651	WP_100067904.1	IS3-like element IS1661 family transposase	89.8	18.8	42.7
MGA_2358	LOCUS_23560	sequence2:2338281..2338676(+)	partial			WP_010774153.1	elongation factor G-binding protein	98.5	60.0	41.1
MGA_2359	LOCUS_23570	sequence2:2338634..2339548(-)	partial			WP_000566798.1	TRAP transporter large permease	89.1	64.1	42.3
MGA_2363	LOCUS_23610	sequence2:2342069..2342494(-)	frameshift		2342552,2342594	WP_002367887.1	bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase	83.7	54.9	58.5
MGA_2367	LOCUS_23650	sequence2:2345141..2345842(-)	frameshift		2345873	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	98.3	81.5	53.3
MGA_2373	LOCUS_23710	sequence2:2349923..2352415(-)	partial			WP_010905630.1	CDP-glycerol glycerophosphotransferase family protein	74.0	76.2	36.4
MGA_2379	LOCUS_23770	sequence2:2356911..2357873(-)	partial			WP_010905629.1	XcbB/CpsF family capsular polysaccharide biosynthesis protein	84.7	49.9	31.2
MGA_2483	LOCUS_24810	sequence2:2492845..2493615(+)	frameshift		2493606	WP_003244520.1	(S)-ureidoglycine--glyoxylate transaminase	96.1	59.9	53.4
MGA_2484	LOCUS_24820	sequence2:2493597..2494016(+)	frameshift		2493606	WP_003244520.1	(S)-ureidoglycine--glyoxylate transaminase	84.2	28.1	57.3
MGA_2487	LOCUS_24850	sequence2:2496456..2496935(-)	partial			WP_002355250.1	DUF2877 domain-containing protein	66.7	40.4	34.5
MGA_2489	LOCUS_24870	sequence2:2497310..2498488(-)	frameshift,internal_stop_codon	2497310..2497312(-)	2498504	WP_010706747.1	DUF1116 domain-containing protein	98.7	38.8	67.7
MGA_2490	LOCUS_24880	sequence2:2498490..2500250(-)	frameshift		2498504	WP_010706747.1	DUF1116 domain-containing protein	99.8	58.3	49.9
MGA_2524	LOCUS_25220	sequence2:2526934..2527167(+)	frameshift,internal_stop_codon	2526709..2526711(+)	2527158	WP_126564639.1	site-specific integrase	97.4	18.6	58.7
MGA_2535	LOCUS_25330	sequence2:2537920..2538219(-)	frameshift		2538266	WP_000460421.1	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	93.9	31.1	91.4
MGA_2536	LOCUS_25340	sequence2:2538210..2538809(-)	frameshift		2538266	WP_000460421.1	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	91.0	60.5	69.6
MGA_2537	LOCUS_25350	sequence2:2538822..2539283(-)	frameshift		2539360	WP_001140234.1	L-serine ammonia-lyase, iron-sulfur-dependent subunit beta	99.3	67.7	46.4
MGA_2538	LOCUS_25360	sequence2:2539355..2539498(-)	frameshift		2539360	WP_002493287.1	L-serine ammonia-lyase, iron-sulfur-dependent subunit beta	100.0	20.8	72.3
MGA_2557	LOCUS_25550	sequence2:2553798..2553989(-)	frameshift		2554054	WP_002484563.1	FAD-containing oxidoreductase	96.8	13.8	75.4
MGA_2558	LOCUS_25560	sequence2:2554049..2555119(-)	frameshift		2554051	WP_000860592.1	FAD-containing oxidoreductase	100.0	80.9	64.3
MGA_2565	LOCUS_25630	sequence2:2559986..2561122(-)	partial			WP_010990014.1	autolysin Ami	51.1	21.0	49.7
MGA_2594	LOCUS_25920	sequence2:2573530..2574168(+)	frameshift,internal_stop_codon	2573488..2573490(+),2574166..2574168(+)	2573450	WP_047210621.1	site-specific integrase	100.0	52.1	77.4
MGA_2595	LOCUS_25930	sequence2:2574241..2574573(+)	internal_stop_codon	2574166..2574168(+)		WP_047210621.1	site-specific integrase	100.0	27.0	87.3
MGA_2619	LOCUS_26170	sequence2:2598325..2598909(-)	partial			WP_001036317.1	phosphatase PAP2 family protein	61.9	64.2	30.5
MGA_2664	LOCUS_26620	sequence2:2650393..2651892(+)	internal_stop_codon	2651890..2651892(+)		WP_000432915.1	ferrous iron transport protein B	99.4	74.8	68.8
MGA_2665	LOCUS_26630	sequence2:2651974..2652300(+)	frameshift,internal_stop_codon	2651890..2651892(+)	2652195	WP_000432915.1	ferrous iron transport protein B	85.2	13.7	63.0
MGA_2677	LOCUS_26750	sequence2:2665638..2665775(-)	partial			WP_000240855.1	50S ribosomal protein L34	60.0	60.0	100.0
