# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_8	LOCUS_00080	sequence1:5518..11625(+)	partial			WP_011082831.1	MSCRAMM family adhesin SdrF	45.4	56.5	64.6
MGA_16	LOCUS_00160	sequence1:19270..19482(+)	partial			WP_001091620.1	hypothetical protein	80.0	68.8	75.0
MGA_33	LOCUS_00330	sequence1:32249..34804(+)	frameshift,internal_stop_codon	34808..34810(+),34802..34804(+)	34822,34923,34780,34924,34783	WP_011082831.1	MSCRAMM family adhesin SdrF	66.6	34.5	58.6
MGA_34	LOCUS_00340	sequence1:34804..34953(+)	frameshift,internal_stop_codon	34808..34810(+),34802..34804(+)	34786,34822,34923,34780,34924	WP_011082831.1	MSCRAMM family adhesin SdrF	81.6	2.5	85.4
MGA_78	LOCUS_00770	sequence2:48020..48862(+)	partial			WP_163911759.1	toll/interleukin-1 receptor domain-containing protein	47.5	27.9	34.6
MGA_90	LOCUS_00890	sequence2:56884..57048(+)	partial			WP_002437634.1	hypothetical protein	63.0	81.0	79.4
MGA_93	LOCUS_00920	sequence2:59247..60107(-)	internal_stop_codon	60117..60119(-)		WP_001020016.1	YhgE/Pip domain-containing protein	97.6	64.9	42.5
MGA_94	LOCUS_00930	sequence2:60117..60518(-)	internal_stop_codon	60117..60119(-)		WP_001020016.1	YhgE/Pip domain-containing protein	91.7	28.7	48.4
MGA_103	LOCUS_01020	sequence2:68604..70010(+)	partial			WP_002370472.1	glycosyltransferase family A protein	50.0	48.4	31.8
MGA_115	LOCUS_01140	sequence2:82102..83100(-)	partial			WP_000731945.1	LPXTG cell wall anchor domain-containing protein	52.7	84.5	46.7
MGA_121	LOCUS_01200	sequence2:90868..91695(+)	frameshift		91692	WP_002467821.1	PrsW family glutamic-type intramembrane protease	97.8	61.9	70.7
MGA_122	LOCUS_01210	sequence2:91674..91973(+)	frameshift		91692	WP_002467821.1	PrsW family glutamic-type intramembrane protease	88.9	20.0	65.9
MGA_134	LOCUS_01330	sequence2:101844..102152(+)	frameshift		102137	WP_000431230.1	O-antigen ligase family protein	94.1	23.3	39.6
MGA_135	LOCUS_01340	sequence2:102254..103087(+)	frameshift		102137	WP_000431230.1	O-antigen ligase family protein	97.8	65.5	56.1
MGA_141	LOCUS_01400	sequence2:107655..109541(+)	partial			WP_002370472.1	glycosyltransferase family A protein	49.8	64.1	28.8
MGA_147	LOCUS_01460	sequence2:115302..115994(+)	partial			WP_000655263.1	class I SAM-dependent methyltransferase	78.3	73.2	27.7
MGA_151	LOCUS_01500	sequence2:119189..120001(+)	partial			WP_014206114.1	dipeptide ABC transporter ATP-binding protein	86.3	46.7	33.2
MGA_165	LOCUS_01640	sequence2:130858..131535(+)	partial			WP_003894962.1	MBL fold metallo-hydrolase	62.2	67.3	31.5
MGA_196	LOCUS_01950	sequence2:161556..162242(-)	partial			WP_081318989.1	FAD-binding dehydrogenase	96.5	39.9	59.1
MGA_197	LOCUS_01960	sequence2:162230..163048(-)	partial			WP_011083948.1	FAD-binding dehydrogenase	95.6	46.7	55.4
MGA_234	LOCUS_02330	sequence2:198325..198456(+)	internal_stop_codon	198319..198321(+)		WP_003223929.1	zinc ribbon domain-containing protein	100.0	63.2	55.8
MGA_238	LOCUS_02370	sequence2:202811..203824(+)	internal_stop_codon	203822..203824(+)		WP_013399551.1	DUF2075 domain-containing protein	97.6	51.0	41.6
MGA_239	LOCUS_02380	sequence2:203897..204541(+)	internal_stop_codon	203822..203824(+)		WP_013399551.1	DUF2075 domain-containing protein	96.7	37.3	38.0
MGA_247	LOCUS_02460	sequence2:213107..216463(+)	partial			WP_164921467.1	choice-of-anchor I family protein	50.4	30.9	35.4
MGA_249	LOCUS_02480	sequence2:217772..218107(+)	partial			WP_011101223.1	helix-turn-helix domain-containing protein	79.3	42.6	34.1
MGA_278	LOCUS_02770	sequence2:243446..244264(+)	partial			WP_011986156.1	CPBP family intramembrane metalloprotease	72.1	66.0	28.8
MGA_335	LOCUS_03340	sequence2:300974..310627(-)	internal_stop_codon	310682..310684(-),310634..310636(-),300974..300976(-),310718..310720(-)		WP_235601755.1	hypothetical protein	31.5	71.1	28.0
MGA_353	LOCUS_03520	sequence2:327573..328514(-)	partial			WP_010921843.1	ABC transporter permease/substrate binding protein	97.1	50.1	33.6
MGA_369	LOCUS_03680	sequence2:353748..354032(-)	partial			WP_000691761.1	YolD-like family protein	100.0	68.1	41.5
MGA_378	LOCUS_03770	sequence2:363053..363196(-)	partial			WP_000612779.1	YolD-like family protein	72.3	25.0	70.6
MGA_386	LOCUS_03850	sequence2:371340..372155(+)	partial			WP_002485463.1	poly-gamma-glutamate hydrolase family protein	74.9	45.6	52.7
MGA_417	LOCUS_04160	sequence2:404509..405825(+)	partial			WP_002456715.1	DUF4064 domain-containing protein	33.8	74.5	29.4
MGA_453	LOCUS_04520	sequence2:449978..450472(+)	partial			WP_010965776.1	DNA topology modulation protein	79.3	74.6	37.9
MGA_454	LOCUS_04530	sequence2:450688..452037(+)	partial			WP_124797038.1	putative glycoside hydrolase	75.9	71.9	39.1
MGA_463	LOCUS_04620	sequence2:462494..463546(+)	partial			WP_000833794.1	zinc ribbon domain-containing protein	91.4	71.3	24.8
MGA_498	LOCUS_04970	sequence2:498198..500702(+)	partial			WP_010905630.1	CDP-glycerol glycerophosphotransferase family protein	69.2	71.7	39.9
MGA_509	LOCUS_05080	sequence2:509253..509570(-)	partial			WP_004398584.1	YrhK family protein	62.9	68.8	43.9
MGA_525	LOCUS_05240	sequence2:525692..525994(+)	partial			WP_003246542.1	glucose starvation-inducible protein GsiB	98.0	63.4	51.0
MGA_528	LOCUS_05270	sequence2:528010..528327(-)	partial			WP_002467724.1	hypothetical protein	68.6	64.8	59.7
MGA_540	LOCUS_05390	sequence2:539997..540311(-)	internal_stop_codon	540408..540410(-)		WP_001831463.1	GNAT family N-acetyltransferase	97.1	61.6	75.2
MGA_545	LOCUS_05440	sequence2:544408..546633(-)	partial			WP_011109431.1	LPXTG cell wall anchor domain-containing protein	11.9	27.0	37.5
MGA_574	LOCUS_05730	sequence2:578203..580659(+)	internal_stop_codon	580657..580659(+)		WP_126795678.1	DEAD/DEAH box helicase	98.9	84.6	45.6
MGA_575	LOCUS_05740	sequence2:580675..581070(+)	internal_stop_codon	580657..580659(+)		WP_011014158.1	DUF3427 domain-containing protein	96.2	13.1	32.3
MGA_579	LOCUS_05780	sequence2:583264..584586(+)	partial			WP_011119720.1	SEFIR domain-containing protein	76.8	65.9	31.6
MGA_594	LOCUS_05930	sequence2:601737..603218(-)	partial			WP_003243980.1	two-component system sensor histidine kinase YvrG	69.0	65.0	27.1
MGA_627	LOCUS_06260	sequence2:640980..641828(+)	partial			WP_002484949.1	hypothetical protein	90.1	52.2	29.3
MGA_630	LOCUS_06290	sequence2:643351..643782(-)	partial			WP_003546204.1	peptidoglycan-binding protein	89.5	56.7	30.5
MGA_639	LOCUS_06380	sequence2:651894..652571(-)	frameshift		652557	WP_011082555.1	ABC transporter permease	97.8	60.4	66.4
MGA_640	LOCUS_06390	sequence2:652555..652977(-)	frameshift		652557	WP_011082555.1	ABC transporter permease	96.4	37.4	50.0
MGA_666	LOCUS_06650	sequence2:678262..679158(-)	frameshift		679166	WP_002470205.1	AraC family transcriptional regulator Rsp	99.7	42.4	64.3
MGA_667	LOCUS_06660	sequence2:679110..680366(-)	frameshift		679166	WP_002470205.1	AraC family transcriptional regulator Rsp	95.9	57.2	57.9
MGA_684	LOCUS_06830	sequence2:698140..698619(-)	partial			WP_010922821.1	twin-arginine translocase subunit TatC	98.7	71.4	66.2
MGA_712	LOCUS_07110	sequence2:726982..727206(+)	internal_stop_codon	727204..727206(+)		WP_000966695.1	YnfA family protein	100.0	68.5	77.0
MGA_714	LOCUS_07130	sequence2:728419..728622(-)	frameshift		728740	WP_000623440.1	MOSC domain-containing protein	91.0	28.1	57.4
MGA_715	LOCUS_07140	sequence2:728729..729082(-)	frameshift		728740	WP_001831436.1	MOSC domain-containing protein	97.4	50.4	66.7
MGA_749	LOCUS_07480	sequence2:762010..762687(-)	partial			WP_002484999.1	CHAP domain-containing protein	50.7	72.6	66.7
MGA_754	LOCUS_07530	sequence2:768080..768931(+)	partial			WP_000131842.1	AraC family transcriptional regulator	89.8	38.1	39.4
MGA_836	LOCUS_08350	sequence2:829348..829590(+)	partial			WP_001829731.1	lactose-specific PTS transporter subunit EIIC	98.8	13.6	91.1
MGA_838	LOCUS_08370	sequence2:830935..831561(-)	partial			WP_011393217.1	helix-turn-helix transcriptional regulator	36.5	52.0	36.7
MGA_844	LOCUS_08430	sequence2:833496..833831(+)	partial			WP_000132051.1	helix-turn-helix domain-containing protein	85.6	39.5	58.3
MGA_1005	LOCUS_10020	sequence2:998118..998939(-)	frameshift		998977	WP_000179343.1	tyrosine-type recombinase/integrase	100.0	70.0	90.1
MGA_1006	LOCUS_10030	sequence2:998936..999289(-)	frameshift		998977	WP_000179343.1	tyrosine-type recombinase/integrase	88.0	26.2	79.6
MGA_1021	LOCUS_10180	sequence2:1007622..1007987(+)	partial			WP_000771368.1	spore coat protein	84.3	59.4	49.0
MGA_1216	LOCUS_12110	sequence2:1215767..1215910(+)	frameshift		1215901	WP_001832701.1	thiol peroxidase	97.9	28.0	63.0
MGA_1217	LOCUS_12120	sequence2:1215940..1216260(+)	frameshift		1215901	WP_001832701.1	thiol peroxidase	100.0	64.6	85.8
MGA_1257	LOCUS_12520	sequence2:1264023..1264511(+)	partial			WP_001157329.1	cytochrome c biogenesis protein	98.8	59.0	68.1
MGA_1266	LOCUS_12610	sequence2:1275502..1276029(+)	internal_stop_codon	1275463..1275465(+)		WP_001830861.1	DNA repair protein RadC	100.0	77.4	65.1
MGA_1270	LOCUS_12650	sequence2:1277364..1277495(+)	partial			WP_001830756.1	hypothetical protein	72.1	67.4	90.3
MGA_1294	LOCUS_12890	sequence2:1302640..1302783(+)	partial			WP_001830746.1	SAS049 family protein	74.5	74.5	77.1
MGA_1339	LOCUS_13340	sequence2:1346870..1347046(+)	partial			WP_000048060.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1345	LOCUS_13400	sequence2:1351511..1351774(+)	partial			WP_000819532.1	diacylglycerol kinase	77.0	58.8	67.2
MGA_1375	LOCUS_13700	sequence2:1379126..1379533(+)	partial			WP_001831025.1	competence type IV pilus minor pilin ComGD	79.3	73.8	48.6
MGA_1385	LOCUS_13800	sequence2:1386666..1386890(-)	partial			WP_001244298.1	SA1362 family protein	74.3	76.4	50.9
MGA_1446	LOCUS_14410	sequence2:1446044..1446379(+)	partial			WP_001831230.1	DUF1405 domain-containing protein	94.6	53.3	46.7
MGA_1661	LOCUS_16560	sequence2:1684157..1684921(-)	partial			WP_000141557.1	thermonuclease family protein	55.1	61.4	65.0
MGA_1674	LOCUS_16690	sequence2:1696969..1697172(+)	partial			WP_001548522.1	TM2 domain-containing protein	100.0	72.8	68.7
MGA_1730	LOCUS_17250	sequence2:1753618..1755492(-)	partial			WP_011023513.1	M14 family metallopeptidase	19.4	33.0	29.1
MGA_1731	LOCUS_17260	sequence2:1755485..1756819(-)	partial			WP_000156404.1	SGNH/GDSL hydrolase family protein	95.7	65.4	40.8
MGA_1747	LOCUS_17420	sequence2:1766731..1767681(-)	partial			WP_002485350.1	minor capsid protein	98.1	69.0	50.6
MGA_1780	LOCUS_17750	sequence2:1781498..1782298(-)	partial			WP_080518306.1	DUF3102 domain-containing protein	69.2	58.4	28.0
MGA_1785	LOCUS_17800	sequence2:1784064..1784600(+)	partial			WP_002485100.1	Ltp family lipoprotein	67.4	55.2	52.5
MGA_1845	LOCUS_18400	sequence2:1845459..1846364(-)	internal_stop_codon	1846470..1846472(-)		WP_002485341.1	cytochrome ubiquinol oxidase subunit I	99.7	66.5	76.3
MGA_1846	LOCUS_18410	sequence2:1846470..1846811(-)	internal_stop_codon	1846470..1846472(-)		WP_002485341.1	cytochrome ubiquinol oxidase subunit I	100.0	25.1	87.6
MGA_1918	LOCUS_19130	sequence2:1923398..1924054(-)	partial			WP_002485581.1	hypothetical protein	62.8	63.1	51.1
MGA_1978	LOCUS_19730	sequence2:1990706..1990870(-)	partial			WP_001831913.1	teichoic acid D-Ala incorporation-associated protein DltX	72.2	81.2	74.4
MGA_2027	LOCUS_20220	sequence2:2026613..2027404(-)	internal_stop_codon	2027468..2027470(-)		WP_002368573.1	adenosine deaminase	97.3	75.4	37.5
MGA_2030	LOCUS_20250	sequence2:2028245..2028496(+)	partial			WP_000857191.1	site-specific integrase	97.6	23.5	44.4
MGA_2122	LOCUS_21170	sequence2:2128265..2128594(+)	partial			WP_002438866.1	DUF1361 domain-containing protein	97.2	51.7	61.3
MGA_2138	LOCUS_21330	sequence2:2142570..2143118(-)	partial			WP_001832142.1	hypothetical protein	36.8	47.9	56.7
MGA_2148	LOCUS_21430	sequence2:2150916..2151275(-)	frameshift,internal_stop_codon	2151313..2151315(-)	2151324,2151279	WP_000818255.1	SarA family transcriptional regulator	100.0	84.4	71.4
MGA_2239	LOCUS_22340	sequence2:2243506..2244615(-)	frameshift		2244614	WP_000347061.1	MFS transporter	99.2	78.8	73.6
MGA_2240	LOCUS_22350	sequence2:2244597..2244911(-)	frameshift		2244614	WP_000347061.1	MFS transporter	98.1	21.9	78.4
MGA_2252	LOCUS_22470	sequence2:2255156..2255725(-)	frameshift		2255787	WP_001106740.1	glycosyltransferase	92.6	35.7	42.3
MGA_2253	LOCUS_22480	sequence2:2255770..2256630(-)	frameshift		2255793	WP_001106740.1	glycosyltransferase	97.6	57.3	48.4
MGA_2267	LOCUS_22610	sequence2:2273905..2276760(+)	partial			WP_000645791.1	LPXTG-anchored adenosine synthase AdsA	70.7	85.0	52.7
MGA_2320	LOCUS_23120	sequence2:2342774..2343880(-)	partial			WP_002457103.1	polysaccharide biosynthesis protein	100.0	72.1	60.4
MGA_2346	LOCUS_23380	sequence2:2367818..2374825(-)	partial			WP_011836875.1	MucBP domain-containing protein	15.6	38.3	33.9
MGA_2357	LOCUS_23480	sequence2:2390470..2394147(-)	internal_stop_codon	2394154..2394156(-)		WP_002485224.1	glutamate synthase large subunit	100.0	81.5	76.8
MGA_2358	LOCUS_23490	sequence2:2394154..2394978(-)	internal_stop_codon	2394154..2394156(-)		WP_002485224.1	glutamate synthase large subunit	100.0	18.3	74.1
MGA_2366	LOCUS_23570	sequence2:2400982..2401605(-)	partial			WP_002456836.1	dipeptide ABC transporter glycylmethionine-binding lipoprotein	100.0	73.7	81.6
MGA_2390	LOCUS_23810	sequence2:2426687..2427316(+)	partial			WP_001829387.1	hypothetical protein	98.6	69.3	70.7
MGA_2429	LOCUS_24200	sequence2:2461771..2462973(-)	partial			WP_000248185.1	iron ABC transporter permease	99.2	72.1	47.1
MGA_2440	LOCUS_24310	sequence2:2472294..2480678(+)	partial			WP_011068088.1	FctA domain-containing protein	33.2	37.4	27.4
MGA_2449	LOCUS_24400	sequence2:2487861..2487998(-)	partial			WP_000240855.1	50S ribosomal protein L34	60.0	60.0	100.0