# locus_id locus_tag location classification internal_stop indel ref_id description query_cov ref_cov identity MGA_6 LOCUS_00060 sequence1:4491..6023(+) partial WP_003244874.1 peptidoglycan endopeptidase LytF 54.3 68.9 32.8 MGA_7 LOCUS_00070 sequence1:6176..6520(+) partial WP_000166920.1 M23 family metallopeptidase 94.7 55.7 52.8 MGA_61 LOCUS_00600 sequence2:55376..55744(+) partial WP_011392911.1 sugar phosphate isomerase/epimerase 73.8 33.6 36.3 MGA_65 LOCUS_00640 sequence2:58965..59507(+) frameshift 58806 WP_010974862.1 N-acyl homoserine lactonase AiiB 100.0 65.2 40.6 MGA_77 LOCUS_00760 sequence2:72221..72667(-) partial WP_000577672.1 helix-turn-helix transcriptional regulator 66.9 66.4 45.5 MGA_85 LOCUS_00840 sequence2:80636..81052(+) partial WP_075141044.1 replication initiator protein A 100.0 44.2 83.3 MGA_96 LOCUS_00950 sequence2:88229..88657(+) frameshift 88215 WP_011085070.1 RraA family protein 98.6 61.8 40.7 MGA_106 LOCUS_01050 sequence2:97879..98076(+) partial WP_001044441.1 M23 family metallopeptidase 86.2 19.7 55.4 MGA_111 LOCUS_01100 sequence2:101413..101856(+) partial WP_003246419.1 helix-turn-helix domain-containing GNAT family N-acetyltransferase 89.8 43.3 37.1 MGA_125 LOCUS_01240 sequence2:114750..118529(+) partial WP_013399748.1 Rib/alpha-like domain-containing protein 49.1 21.6 25.8 MGA_148 LOCUS_01470 sequence2:150139..151941(+) partial WP_011015494.1 metallophosphoesterase family protein 73.0 65.9 26.0 MGA_150 LOCUS_01490 sequence2:152981..153241(+) partial WP_000664359.1 DUF1722 domain-containing protein 89.5 60.6 46.8 MGA_175 LOCUS_01740 sequence2:179516..180085(+) partial WP_011141158.1 sigma-70 family RNA polymerase sigma factor 83.6 71.2 36.4 MGA_178 LOCUS_01770 sequence2:182874..183836(-) partial WP_001044560.1 immunodominant staphylococcal antigen IsaB 44.4 81.1 27.4 MGA_198 LOCUS_01970 sequence2:202656..203078(+) partial WP_004254740.1 carboxymuconolactone decarboxylase family protein 70.7 82.0 47.0 MGA_218 LOCUS_02170 sequence2:231241..232062(+) partial WP_002485463.1 poly-gamma-glutamate hydrolase family protein 75.5 46.3 44.2 MGA_227 LOCUS_02260 sequence2:242867..245941(+) partial WP_010989814.1 LPXTG cell wall anchor domain-containing protein 16.6 19.0 35.6 MGA_259 LOCUS_02580 sequence2:281870..283303(+) partial WP_000883425.1 YhgE/Pip domain-containing protein 55.6 34.3 29.9 MGA_262 LOCUS_02610 sequence2:284530..285351(-) partial WP_012583944.1 AraC family transcriptional regulator 60.1 59.6 28.2 MGA_268 LOCUS_02670 sequence2:291521..304117(+) partial WP_011254514.1 DUF1542 domain-containing protein 50.9 79.5 22.0 MGA_276 LOCUS_02750 sequence2:310911..317852(+) partial WP_003147473.1 Ig-like domain-containing protein 64.5 59.7 33.0 MGA_278 LOCUS_02770 sequence2:318584..319525(-) partial WP_003404247.1 DsbA family protein 58.1 81.9 29.7 MGA_289 LOCUS_02880 sequence2:329240..330181(+) partial WP_010886457.1 mechanosensitive ion channel 98.7 56.0 24.9 MGA_292 LOCUS_02910 sequence2:332964..334916(-) partial WP_011203125.1 right-handed parallel beta-helix repeat-containing protein 94.8 45.1 35.4 MGA_306 LOCUS_03050 sequence2:349782..351005(+) partial WP_124797038.1 putative glycoside hydrolase 84.5 72.6 36.9 MGA_349 LOCUS_03480 sequence2:404086..404841(+) partial WP_011861991.1 ATP-binding cassette domain-containing protein 91.2 69.8 49.8 MGA_425 LOCUS_04240 sequence2:485074..485439(-) frameshift 485213,485381,485189 WP_000643657.1 multidrug resistance efflux transporter family protein 45.5 17.6 45.5 MGA_448 LOCUS_04470 sequence2:512495..512932(+) partial WP_002456715.1 DUF4064 domain-containing protein 91.7 65.3 29.0 MGA_457 LOCUS_04560 sequence2:524921..525343(+) partial WP_002855690.1 alpha/beta hydrolase 84.3 38.3 35.6 MGA_462 LOCUS_04610 sequence2:531338..532492(+) frameshift,internal_stop_codon 532487..532489(+) 532483 WP_002382276.1 hydroxymethylglutaryl-CoA reductase, degradative 99.2 47.9 54.4 MGA_542 LOCUS_05410 sequence2:626561..626761(+) frameshift,internal_stop_codon 626527..626529(+) 626589,626758 WP_003245605.1 SDR family oxidoreductase 100.0 23.7 45.5 MGA_543 LOCUS_05420 sequence2:626806..627300(+) frameshift,internal_stop_codon 626527..626529(+) 626758,626598 WP_010964640.1 SDR family oxidoreductase 98.8 56.8 68.5 MGA_550 LOCUS_05490 sequence2:631241..631870(-) frameshift,internal_stop_codon 631870..631872(-) 631881 WP_000592610.1 imidazole glycerol phosphate synthase subunit HisF 97.6 44.2 69.6 MGA_589 LOCUS_05880 sequence2:672717..673259(-) frameshift 672674,672644,673317,672743 WP_001832893.1 membrane protein insertase YidC 96.7 62.6 62.6 MGA_625 LOCUS_06240 sequence2:708206..708577(-) partial WP_011087977.1 Hsp20/alpha crystallin family protein 75.6 55.8 33.3 MGA_654 LOCUS_06530 sequence2:738664..739416(+) partial WP_000827010.1 hypothetical protein 56.8 73.5 45.3 MGA_670 LOCUS_06690 sequence2:759216..759935(-) partial WP_011082549.1 IS1182-like element ISSep1 family transposase 97.1 42.0 83.2 MGA_826 LOCUS_08250 sequence2:902768..903625(+) partial WP_000170400.1 staphyloferrin A export MFS transporter 97.9 70.5 58.6 MGA_852 LOCUS_08510 sequence2:940180..940320(+) frameshift,internal_stop_codon 940375..940377(+) 940314 WP_005816008.1 DUF2200 domain-containing protein 100.0 39.7 56.5 MGA_879 LOCUS_08780 sequence2:965564..966121(+) partial WP_000701483.1 DNA-directed RNA polymerase subunit delta 71.9 75.6 78.2 MGA_910 LOCUS_09090 sequence2:994223..994642(+) partial WP_000932694.1 single-stranded DNA-binding protein 74.8 79.4 72.1 MGA_922 LOCUS_09210 sequence2:1003954..1004253(-) partial WP_001059647.1 ISL3 family transposase 94.9 21.2 41.5 MGA_972 LOCUS_09710 sequence2:1057825..1059591(+) partial WP_049387514.1 MSCRAMM-like protein SdrH 63.1 81.5 31.4 MGA_1033 LOCUS_10320 sequence2:1119212..1119595(-) internal_stop_codon 1119596..1119598(-) WP_001089621.1 radical SAM/CxCxxxxC motif protein YfkAB 96.1 31.9 73.0 MGA_1034 LOCUS_10330 sequence2:1119596..1120372(-) internal_stop_codon 1119596..1119598(-) WP_001830386.1 radical SAM/CxCxxxxC motif protein YfkAB 95.7 65.0 80.6 MGA_1068 LOCUS_10650 sequence2:1158923..1159150(-) frameshift,internal_stop_codon 1159202..1159204(-),1159268..1159270(-),1159211..1159213(-) 1158985 WP_000894660.1 formate C-acetyltransferase 73.3 7.3 76.4 MGA_1088 LOCUS_10840 sequence2:1181121..1181345(+) partial WP_011104332.1 MmcQ/YjbR family DNA-binding protein 98.6 62.4 49.3 MGA_1096 LOCUS_10920 sequence2:1186695..1186958(-) frameshift 1187090,1186991 WP_167797511.1 transposase 78.2 31.8 76.5 MGA_1097 LOCUS_10930 sequence2:1187088..1188254(-) frameshift,internal_stop_codon 1188264..1188266(-) 1188393,1186994,1187093 WP_002494449.1 IS1182-like element ISSep1 family transposase 100.0 69.4 83.0 MGA_1113 LOCUS_11090 sequence2:1200623..1200844(-) frameshift 1200826,1201063 WP_003721931.1 osmoprotectant ABC transporter substrate-binding protein 94.5 22.4 62.3 MGA_1114 LOCUS_11100 sequence2:1200819..1200953(-) frameshift 1200826,1201063 WP_002470137.1 osmoprotectant ABC transporter substrate-binding protein 95.5 13.4 76.2 MGA_1115 LOCUS_11110 sequence2:1201061..1201255(-) frameshift,internal_stop_codon 1201316..1201318(-) 1200826,1201069 WP_001830497.1 osmoprotectant ABC transporter substrate-binding protein 100.0 20.1 57.8 MGA_1116 LOCUS_11120 sequence2:1201316..1201483(-) frameshift,internal_stop_codon 1201316..1201318(-) 1201069 WP_000721551.1 osmoprotectant ABC transporter substrate-binding protein 100.0 17.6 52.7 MGA_1225 LOCUS_12210 sequence2:1333198..1333497(+) partial WP_002440170.1 A24 family peptidase 86.9 36.4 33.7 MGA_1231 LOCUS_12270 sequence2:1338473..1338691(+) frameshift 1338685 WP_000228166.1 nucleotidyltransferase domain-containing protein 94.4 23.2 52.9 MGA_1232 LOCUS_12280 sequence2:1338733..1339152(+) frameshift 1339141,1338685 WP_012775607.1 nucleotidyltransferase domain-containing protein 97.1 46.7 52.6 MGA_1237 LOCUS_12330 sequence2:1341204..1341383(-) partial WP_001830753.1 hypothetical protein 71.2 71.2 66.7 MGA_1239 LOCUS_12350 sequence2:1342057..1342215(+) partial WP_001830756.1 hypothetical protein 65.4 73.9 76.5 MGA_1310 LOCUS_13060 sequence2:1413420..1413596(+) partial WP_000048060.1 30S ribosomal protein S21 74.1 74.1 95.3 MGA_1341 LOCUS_13370 sequence2:1441623..1441994(+) frameshift 1441964 WP_000697220.1 competence type IV pilus ATPase ComGA 91.9 34.9 59.3 MGA_1342 LOCUS_13380 sequence2:1441994..1442596(+) frameshift 1441955 WP_001831109.1 competence type IV pilus ATPase ComGA 100.0 61.7 66.0 MGA_1347 LOCUS_13430 sequence2:1444655..1445098(+) internal_stop_codon 1444613..1444615(+),1444607..1444609(+),1444634..1444636(+),1444652..1444654(+) WP_002440043.1 competence type IV pilus minor pilin ComGF 94.6 83.4 36.7 MGA_1497 LOCUS_14930 sequence2:1594896..1595471(+) internal_stop_codon 1595469..1595471(+) WP_001240990.1 MerR family transcriptional regulator 99.5 76.5 54.2 MGA_1499 LOCUS_14950 sequence2:1597985..1598692(-) partial WP_003438605.1 peroxiredoxin 93.2 31.7 42.2 MGA_1500 LOCUS_14960 sequence2:1599000..1599437(+) frameshift,internal_stop_codon 1599571..1599573(+) 1599654,1599407 WP_011948711.1 cytochrome P450 93.1 32.2 40.7 MGA_1502 LOCUS_14980 sequence2:1599629..1600255(+) frameshift,internal_stop_codon 1599571..1599573(+) 1599657 WP_011948711.1 cytochrome P450 92.3 44.9 42.7 MGA_1506 LOCUS_15020 sequence2:1604774..1605052(+) frameshift 1605046 WP_000792342.1 BCCT family transporter 94.6 16.7 70.1 MGA_1538 LOCUS_15340 sequence2:1636136..1636702(-) partial WP_002485473.1 zinc ribbon domain-containing protein 78.7 58.2 31.8 MGA_1572 LOCUS_15680 sequence2:1676062..1676517(-) frameshift 1676112 WP_003244329.1 protease synthase/sporulation negative transcriptional regulator PaiB 88.1 64.3 49.6 MGA_1577 LOCUS_15730 sequence2:1679023..1679193(-) frameshift,internal_stop_codon 1679023..1679025(-),1679194..1679196(-) 1678968 WP_000093392.1 IS200/IS605 family transposase 100.0 34.8 87.5 MGA_1578 LOCUS_15740 sequence2:1679194..1679325(-) frameshift,internal_stop_codon 1679023..1679025(-),1679194..1679196(-) 1678968 WP_001832700.1 IS200/IS605-like element ISSep3 family transposase 62.8 16.9 85.2 MGA_1673 LOCUS_16690 sequence2:1785428..1785622(+) internal_stop_codon 1785389..1785391(+),1785620..1785622(+) WP_001832263.1 NtaA/DmoA family FMN-dependent monooxygenase 100.0 14.7 60.9 MGA_1674 LOCUS_16700 sequence2:1785704..1785898(+) frameshift,internal_stop_codon 1785620..1785622(+) 1785883,1786093 WP_001832263.1 NtaA/DmoA family FMN-dependent monooxygenase 93.8 13.8 55.0 MGA_1675 LOCUS_16710 sequence2:1786071..1786277(+) internal_stop_codon 1786275..1786277(+) WP_126475239.1 IS1182 family transposase 73.5 9.2 74.0 MGA_1676 LOCUS_16720 sequence2:1786365..1786880(+) frameshift,internal_stop_codon 1786275..1786277(+) 1786874 WP_095092556.1 IS1182 family transposase 100.0 30.5 88.3 MGA_1677 LOCUS_16730 sequence2:1786880..1787236(+) frameshift 1786874 WP_002494449.1 IS1182-like element ISSep1 family transposase 83.9 17.7 84.8 MGA_1709 LOCUS_17050 sequence2:1819710..1820144(-) internal_stop_codon 1820154..1820156(-) WP_010957212.1 AbgT family transporter 95.8 26.7 55.8 MGA_1710 LOCUS_17060 sequence2:1820154..1821224(-) internal_stop_codon 1820154..1820156(-) WP_013096863.1 p-aminobenzoyl-glutamate transporter 97.5 68.3 39.7 MGA_1730 LOCUS_17260 sequence2:1836771..1838357(-) partial WP_010989348.1 phage tail protein 43.6 57.7 37.4 MGA_1732 LOCUS_17280 sequence2:1839202..1846230(-) partial WP_012047792.1 phage tail tape measure protein 38.5 81.5 26.2 MGA_1735 LOCUS_17310 sequence2:1846851..1847327(-) partial WP_010890689.1 Ig-like domain-containing protein 73.4 12.0 51.7 MGA_1746 LOCUS_17420 sequence2:1854841..1855590(-) partial WP_010965201.1 HNH endonuclease signature motif containing protein 27.3 66.0 48.5 MGA_1767 LOCUS_17630 sequence2:1861866..1862585(-) partial WP_000132051.1 helix-turn-helix domain-containing protein 39.3 38.7 58.5 MGA_1780 LOCUS_17760 sequence2:1867736..1868419(+) partial WP_010905682.1 helix-turn-helix domain-containing protein 33.9 42.8 48.1 MGA_1815 LOCUS_18110 sequence2:1905027..1905917(-) partial WP_002470268.1 FtsQ-type POTRA domain-containing protein 99.7 63.5 57.3 MGA_1851 LOCUS_18470 sequence2:1946344..1946706(-) partial WP_001830560.1 MepB family protein 97.5 70.9 49.6 MGA_1875 LOCUS_18710 sequence2:1971160..1971930(-) frameshift 1971932 WP_000819684.1 spermidine/putrescine ABC transporter substrate-binding protein 99.6 71.4 69.4 MGA_1876 LOCUS_18720 sequence2:1971915..1972226(-) frameshift 1971932 WP_000819684.1 spermidine/putrescine ABC transporter substrate-binding protein 95.1 27.5 78.6 MGA_1877 LOCUS_18730 sequence2:1972378..1973028(-) frameshift,internal_stop_codon 1972281..1972283(-) 1972418,1972967 WP_103388157.1 ABC transporter permease 87.5 71.3 73.5 MGA_1879 LOCUS_18750 sequence2:1973829..1974482(-) frameshift 1974511 WP_001831686.1 ABC transporter ATP-binding protein 99.1 59.1 80.9 MGA_1880 LOCUS_18760 sequence2:1974482..1974928(-) frameshift 1974511 WP_001831686.1 ABC transporter ATP-binding protein 93.9 38.2 69.8 MGA_1988 LOCUS_19840 sequence2:2093812..2094075(-) frameshift 2093736,2093826 WP_001026122.1 MBL fold metallo-hydrolase 96.6 32.9 56.0 MGA_2068 LOCUS_20640 sequence2:2173527..2173733(-) partial WP_001548522.1 TM2 domain-containing protein 94.1 69.6 76.6 MGA_2092 LOCUS_20880 sequence2:2191990..2192670(-) partial WP_203873878.1 alpha/beta hydrolase fold domain-containing protein 68.1 40.9 29.8 MGA_2095 LOCUS_20910 sequence2:2194283..2194546(+) frameshift 2194133 WP_001830914.1 LysE family translocator 96.6 40.5 43.5 MGA_2116 LOCUS_21120 sequence2:2214252..2214974(-) partial WP_000070831.1 DUF4887 domain-containing protein 21.2 25.8 53.7 MGA_2136 LOCUS_21320 sequence2:2228597..2230939(-) partial WP_010714140.1 DNA primase family protein 57.7 56.0 52.0 MGA_2140 LOCUS_21360 sequence2:2231815..2232438(-) partial WP_001002368.1 ORF6C domain-containing protein 44.9 40.7 34.4 MGA_2173 LOCUS_21690 sequence2:2270238..2270414(-) frameshift 2270470 WP_000985617.1 bacillithiol system redox-active protein YtxJ 100.0 54.7 79.3 MGA_2176 LOCUS_21720 sequence2:2271717..2272106(+) frameshift,internal_stop_codon 2272104..2272106(+) 2272193 WP_001829625.1 GrpB family protein 100.0 73.7 60.5 MGA_2186 LOCUS_21820 sequence2:2281999..2282274(-) partial WP_001829589.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI 100.0 68.9 78.0 MGA_2377 LOCUS_23730 sequence2:2474928..2475182(-) partial WP_001832177.1 membrane protein 91.7 21.7 45.5 MGA_2379 LOCUS_23750 sequence2:2477038..2479065(-) partial WP_003227939.1 poly(glucosyl N-acetylgalactosamine 1-phosphate) glucosyltransferase 72.3 51.7 26.1 MGA_2380 LOCUS_23760 sequence2:2479062..2480186(-) partial WP_000975351.1 poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase 59.4 37.0 30.9 MGA_2397 LOCUS_23930 sequence2:2498570..2499154(-) partial WP_001044560.1 immunodominant staphylococcal antigen IsaB 68.0 74.9 33.3 MGA_2403 LOCUS_23990 sequence2:2502511..2505027(-) partial WP_010905630.1 CDP-glycerol glycerophosphotransferase family protein 73.3 76.2 35.5 MGA_2404 LOCUS_24000 sequence2:2505044..2505310(-) frameshift 2505393 WP_001793242.1 NAD-dependent epimerase/dehydratase family protein 92.0 24.8 42.0 MGA_2405 LOCUS_24010 sequence2:2505328..2505978(-) frameshift 2505393 WP_001793242.1 NAD-dependent epimerase/dehydratase family protein 94.0 62.3 51.2 MGA_2406 LOCUS_24020 sequence2:2506226..2507482(-) partial WP_002386255.1 DUF1958 domain-containing protein 87.1 74.0 38.3 MGA_2503 LOCUS_24970 sequence2:2634207..2634797(-) partial WP_003641231.1 phosphatase PAP2 family protein 61.7 60.5 31.6 MGA_2519 LOCUS_25130 sequence2:2656341..2657606(-) frameshift 2657622 WP_010706747.1 DUF1116 domain-containing protein 98.1 41.4 67.8 MGA_2520 LOCUS_25140 sequence2:2657608..2659368(-) frameshift 2657622 WP_010706747.1 DUF1116 domain-containing protein 99.1 57.9 49.8 MGA_2582 LOCUS_25760 sequence2:2718638..2719951(-) partial WP_010990014.1 autolysin Ami 70.0 37.4 37.7 MGA_2615 LOCUS_26090 sequence2:2750350..2751759(-) frameshift 2751989 WP_011117524.1 P-loop NTPase fold protein 89.1 66.8 49.3 MGA_2616 LOCUS_26100 sequence2:2751981..2752343(-) frameshift 2751989 WP_011117524.1 P-loop NTPase fold protein 98.3 19.3 67.8 MGA_2617 LOCUS_26110 sequence2:2752970..2753338(+) frameshift 2752937 WP_000436823.1 DUF805 domain-containing protein 96.7 61.7 32.0 MGA_2638 LOCUS_26320 sequence2:2768478..2769659(-) frameshift,internal_stop_codon 2769680..2769682(-) 2769673 WP_002289289.1 ABC transporter permease 100.0 73.7 28.1 MGA_2639 LOCUS_26330 sequence2:2769680..2770066(-) frameshift 2769682 WP_011100908.1 ABC transporter permease 95.3 22.9 30.9 MGA_2666 LOCUS_26600 sequence2:2793803..2794078(-) frameshift 2793877 WP_000072995.1 GNAT family N-acetyltransferase 90.1 64.4 41.7 MGA_2708 LOCUS_27020 sequence2:2846172..2846606(+) partial WP_072362001.1 DMT family transporter 95.8 44.4 53.6 MGA_2734 LOCUS_27280 sequence2:2874503..2874640(-) partial WP_000240855.1 50S ribosomal protein L34 60.0 60.0 100.0