# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00030	sequence1:2847..3548(+)	partial			WP_011082784.1	DsbA family protein	73.8	84.3	35.5
MGA_7	LOCUS_00070	sequence1:6991..7851(+)	frameshift		7839	WP_001831812.1	DNA gyrase subunit A	99.7	31.9	93.3
MGA_8	LOCUS_00080	sequence1:7943..9622(+)	frameshift		7845	WP_000819096.1	DNA gyrase subunit A	100.0	64.2	73.6
MGA_32	LOCUS_00320	sequence1:35061..36038(+)	frameshift		35957	WP_011962895.1	DNA (cytosine-5-)-methyltransferase	94.5	77.3	45.3
MGA_33	LOCUS_00330	sequence1:36004..36300(+)	frameshift		35951	WP_011183205.1	DNA (cytosine-5-)-methyltransferase	87.8	22.8	50.0
MGA_42	LOCUS_00420	sequence1:48451..49023(+)	partial			WP_000402394.1	helix-turn-helix transcriptional regulator	74.7	73.1	49.0
MGA_43	LOCUS_00430	sequence1:49485..49727(-)	frameshift		49749	WP_000544219.1	AraC family transcriptional regulator	85.0	22.7	45.6
MGA_44	LOCUS_00440	sequence1:49744..49986(-)	frameshift		49746	WP_003246240.1	AraC family transcriptional regulator	87.5	23.7	51.4
MGA_53	LOCUS_00530	sequence1:58119..59546(+)	partial			WP_000157953.1	sucrose-specific PTS transporter subunit IIBC	99.2	73.6	55.9
MGA_55	LOCUS_00550	sequence1:61848..62189(+)	frameshift		62147	WP_000468966.1	methyltransferase domain-containing protein	88.5	42.1	39.2
MGA_91	LOCUS_00910	sequence1:104586..104816(+)	frameshift		104768	WP_001792547.1	alpha/beta hydrolase	88.2	22.8	37.3
MGA_92	LOCUS_00920	sequence1:104774..105457(+)	frameshift		104768	WP_001792547.1	alpha/beta hydrolase	98.7	76.2	63.8
MGA_100	LOCUS_01000	sequence1:112172..113059(+)	partial			WP_013533429.1	succinylglutamate desuccinylase/aspartoacylase family protein	34.9	31.3	47.1
MGA_117	LOCUS_01170	sequence1:137891..138718(+)	partial			WP_010990014.1	autolysin Ami	68.7	20.6	45.0
MGA_121	LOCUS_01210	sequence1:143163..143756(+)	frameshift		143750,143991	WP_000028663.1	type I restriction-modification system subunit M	100.0	38.0	69.5
MGA_122	LOCUS_01220	sequence1:143728..144003(+)	frameshift		143753,143994	WP_000028663.1	type I restriction-modification system subunit M	89.0	15.6	77.8
MGA_123	LOCUS_01230	sequence1:144035..144721(+)	frameshift		143753,143994	WP_000028663.1	type I restriction-modification system subunit M	96.5	42.5	74.5
MGA_124	LOCUS_01240	sequence1:144714..145508(+)	partial			WP_000072584.1	restriction endonuclease subunit S	86.4	56.6	70.2
MGA_125	LOCUS_01250	sequence1:145519..145953(+)	partial			WP_000072627.1	restriction endonuclease subunit S	45.8	16.1	54.5
MGA_134	LOCUS_01340	sequence1:151740..152120(-)	partial			WP_000728765.1	staphylococcal protein A	77.8	20.4	53.1
MGA_136	LOCUS_01360	sequence1:152528..153610(-)	frameshift		152593,152590,152599	WP_000728765.1	staphylococcal protein A	74.2	59.3	62.9
MGA_147	LOCUS_01470	sequence1:166201..166794(-)	partial			WP_010966703.1	TetR/AcrR family transcriptional regulator	64.5	70.8	31.1
MGA_150	LOCUS_01500	sequence1:170017..170784(+)	partial			WP_062821545.1	serine protease	89.4	70.9	28.7
MGA_151	LOCUS_01510	sequence1:171044..171811(+)	partial			WP_010970462.1	trypsin-like serine protease	88.6	35.8	29.0
MGA_153	LOCUS_01530	sequence1:173204..173737(-)	partial			WP_011391188.1	PadR family transcriptional regulator	45.2	39.7	50.6
MGA_154	LOCUS_01540	sequence1:174007..174189(+)	partial			WP_011101223.1	helix-turn-helix domain-containing protein	91.7	30.1	43.6
MGA_156	LOCUS_01560	sequence1:174829..175101(+)	frameshift,internal_stop_codon	174549..174551(+)	174767	WP_011948612.1	type II CAAX endopeptidase family protein	91.1	30.0	40.5
MGA_175	LOCUS_01750	sequence1:195932..196372(+)	partial			WP_002356543.1	(4Fe-4S)-binding protein	47.3	74.5	47.1
MGA_177	LOCUS_01770	sequence1:197772..198710(-)	frameshift		198717	WP_002485611.1	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	99.7	35.8	90.7
MGA_178	LOCUS_01780	sequence1:198676..200373(-)	frameshift		198723	WP_002485611.1	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	97.7	63.9	71.9
MGA_187	LOCUS_01870	sequence1:209893..214296(-)	partial			WP_001032521.1	SpGH101 family endo-alpha-N-acetylgalactosaminidase	73.8	47.2	51.5
MGA_194	LOCUS_01940	sequence1:220761..221288(+)	frameshift		221264	WP_002357253.1	PTS sugar transporter subunit IIC	98.9	58.2	72.4
MGA_195	LOCUS_01950	sequence1:221269..221661(+)	frameshift		221264	WP_002357253.1	PTS sugar transporter subunit IIC	88.5	38.5	62.6
MGA_199	LOCUS_01990	sequence1:224382..224615(-)	internal_stop_codon	224646..224648(-)		WP_001557163.1	ISL3-like element IS1181 family transposase	94.8	16.6	46.6
MGA_200	LOCUS_02000	sequence1:224646..224843(-)	internal_stop_codon	224646..224648(-)		WP_001557163.1	ISL3-like element IS1181 family transposase	100.0	14.8	50.8
MGA_201	LOCUS_02010	sequence1:225041..225568(-)	partial			WP_000475325.1	staphylococcal enterotoxin-like toxin X	77.7	67.0	60.3
MGA_211	LOCUS_02110	sequence1:236083..236640(+)	frameshift		236081	WP_002437234.1	DUF3169 family protein	99.5	75.4	44.6
MGA_224	LOCUS_02240	sequence1:249830..250048(-)	frameshift		250106	WP_001831524.1	2,3-butanediol dehydrogenase	90.3	18.6	78.5
MGA_225	LOCUS_02250	sequence1:250068..250877(-)	frameshift		250109	WP_001831524.1	2,3-butanediol dehydrogenase	95.5	73.4	75.1
MGA_236	LOCUS_02360	sequence1:262039..263253(+)	internal_stop_codon	263251..263253(+)		WP_010964653.1	FGGY-family carbohydrate kinase	98.3	74.3	52.6
MGA_237	LOCUS_02370	sequence1:263269..263655(+)	internal_stop_codon	263251..263253(+)		WP_008760641.1	FGGY-family carbohydrate kinase	88.3	21.7	45.7
MGA_245	LOCUS_02450	sequence1:270476..272065(+)	partial			WP_011082831.1	MSCRAMM family adhesin SdrF	28.4	9.4	38.1
MGA_247	LOCUS_02470	sequence1:274253..276010(+)	partial			WP_011082831.1	MSCRAMM family adhesin SdrF	46.7	17.0	42.0
MGA_256	LOCUS_02560	sequence1:291614..292945(-)	frameshift,internal_stop_codon	291614..291616(-)	291628,291606	WP_002485492.1	hypothetical protein	95.3	67.2	34.0
MGA_258	LOCUS_02580	sequence1:294014..295825(-)	internal_stop_codon	295886..295888(-),294014..294016(-)		WP_002485492.1	hypothetical protein	54.6	58.6	30.3
MGA_264	LOCUS_02640	sequence1:298242..299264(+)	frameshift		298209	WP_000916127.1	accessory Sec system protein translocase subunit SecY2	100.0	84.6	51.6
MGA_267	LOCUS_02670	sequence1:302346..302519(+)	frameshift		302492	WP_002437878.1	accessory Sec system protein Asp3	98.2	29.5	44.6
MGA_269	LOCUS_02690	sequence1:303258..305105(+)	frameshift		305003	WP_000680945.1	accessory Sec system translocase SecA2	98.9	76.5	68.5
MGA_270	LOCUS_02700	sequence1:305009..305641(+)	frameshift		305003	WP_000680945.1	accessory Sec system translocase SecA2	98.6	26.3	49.3
MGA_276	LOCUS_02760	sequence1:313435..313686(-)	frameshift		313627	WP_001008400.1	class I adenylate-forming enzyme family protein	80.7	13.2	65.7
MGA_287	LOCUS_02870	sequence1:324012..324473(+)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	34.2	49.3
MGA_296	LOCUS_02960	sequence1:335032..336528(+)	partial			WP_005789151.1	sodium:solute symporter family protein	69.5	70.2	25.9
MGA_301	LOCUS_03010	sequence1:338369..338767(+)	frameshift		338749	WP_000727772.1	zinc ABC transporter substrate-binding lipoprotein AdcA	98.5	25.0	63.1
MGA_302	LOCUS_03020	sequence1:338748..339989(+)	frameshift		338749	WP_000727772.1	zinc ABC transporter substrate-binding lipoprotein AdcA	89.3	72.0	67.1
MGA_309	LOCUS_03090	sequence1:346612..346881(-)	frameshift		346894	WP_000127990.1	sensor histidine kinase	91.0	15.6	58.0
MGA_310	LOCUS_03100	sequence1:346889..348169(-)	frameshift		346894	WP_000127990.1	sensor histidine kinase	99.5	81.7	55.9
MGA_366	LOCUS_03660	sequence1:414493..416367(+)	partial			WP_002370472.1	glycosyltransferase family A protein	34.6	44.7	34.1
MGA_384	LOCUS_03840	sequence1:434168..434758(+)	frameshift		434731	WP_000872486.1	D-ribitol-5-phosphate cytidylyltransferase	96.4	79.4	74.6
MGA_385	LOCUS_03850	sequence1:434724..434885(+)	frameshift		434731	WP_000872486.1	D-ribitol-5-phosphate cytidylyltransferase	94.3	21.0	64.0
MGA_404	LOCUS_04040	sequence1:453266..454147(+)	partial			WP_011403679.1	NAD(P)H-binding protein	47.4	28.5	30.7
MGA_411	LOCUS_04110	sequence1:458893..459354(+)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	34.2	48.7
MGA_416	LOCUS_04160	sequence1:463922..468937(+)	partial			WP_015704442.1	putative mucin/carbohydrate-binding domain-containing protein	34.8	58.5	28.2
MGA_420	LOCUS_04200	sequence1:473356..473772(+)	frameshift		473763	WP_000558755.1	FAD/NAD(P)-binding protein	95.7	34.4	50.0
MGA_421	LOCUS_04210	sequence1:473756..474517(+)	frameshift		473754	WP_002439051.1	NAD(P)-binding domain-containing protein	94.9	63.5	48.4
MGA_444	LOCUS_04440	sequence1:498281..499537(-)	frameshift		499556	WP_002438166.1	fructose-1,6-bisphosphatase	98.6	63.5	71.8
MGA_445	LOCUS_04450	sequence1:499473..500252(-)	frameshift		499559	WP_000192172.1	fructose-1,6-bisphosphatase	89.6	35.5	67.7
MGA_449	LOCUS_04490	sequence1:503790..504290(+)	frameshift		503839	WP_000759366.1	class A sortase SrtA	89.2	72.3	67.1
MGA_459	LOCUS_04590	sequence1:516054..516968(+)	frameshift		516902	WP_001557163.1	ISL3-like element IS1181 family transposase	94.4	65.1	47.6
MGA_460	LOCUS_04600	sequence1:516940..517374(+)	frameshift		516902	WP_001059647.1	ISL3 family transposase	95.8	31.3	46.4
MGA_461	LOCUS_04610	sequence1:517657..517989(+)	frameshift		517547	WP_001557163.1	ISL3-like element IS1181 family transposase	95.5	23.9	49.5
MGA_469	LOCUS_04690	sequence1:526166..526909(+)	partial			WP_001829860.1	serine protease	76.1	62.1	32.4
MGA_476	LOCUS_04760	sequence1:533988..534674(+)	partial			WP_002681843.1	PTS sugar transporter subunit IIC	99.1	66.9	46.1
MGA_485	LOCUS_04850	sequence1:540825..541433(+)	frameshift		541394	WP_001118725.1	nitrite reductase large subunit NirB	98.5	24.8	70.9
MGA_486	LOCUS_04860	sequence1:541393..543180(+)	frameshift		541394,543147	WP_001118725.1	nitrite reductase large subunit NirB	98.3	73.0	80.2
MGA_505	LOCUS_05050	sequence1:562228..564321(-)	partial			WP_011074572.1	AraC family transcriptional regulator	19.1	43.5	25.6
MGA_516	LOCUS_05160	sequence1:576115..577284(+)	frameshift		577152	WP_001831564.1	L-lactate permease	89.2	65.1	64.0
MGA_517	LOCUS_05170	sequence1:577202..577720(+)	frameshift		577155	WP_001831564.1	L-lactate permease	97.1	31.3	80.2
MGA_518	LOCUS_05180	sequence1:578450..585682(+)	partial			WP_013399748.1	Rib/alpha-like domain-containing protein	67.6	56.6	27.4
MGA_525	LOCUS_05250	sequence1:593511..594296(-)	partial			WP_001549718.1	YdcF family protein	81.6	67.4	40.4
MGA_528	LOCUS_05280	sequence1:595180..595497(+)	frameshift		595470	WP_002470820.1	zinc-ribbon domain-containing protein	95.2	21.0	36.0
MGA_529	LOCUS_05290	sequence1:595466..596572(+)	frameshift		595470	WP_000833794.1	zinc ribbon domain-containing protein	94.8	76.7	41.6
MGA_539	LOCUS_05390	sequence1:606373..607248(+)	internal_stop_codon	606334..606336(+),606112..606114(+)		WP_154224912.1	IS110 family transposase	96.6	71.7	65.5
MGA_540	LOCUS_05400	sequence1:607294..608055(-)	partial			WP_095092556.1	IS1182 family transposase	60.5	31.4	54.0
MGA_561	LOCUS_05610	sequence1:627818..628303(+)	frameshift		628297	WP_001077725.1	YjiH family protein	91.9	33.9	67.6
MGA_562	LOCUS_05620	sequence1:628383..629129(+)	frameshift		628300	WP_001077725.1	YjiH family protein	93.5	53.1	72.4
MGA_569	LOCUS_05690	sequence1:637068..637298(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	85.5	15.0	39.4
MGA_570	LOCUS_05700	sequence1:637193..637573(-)	frameshift		637187	WP_001557163.1	ISL3-like element IS1181 family transposase	71.4	20.5	53.3
MGA_632	LOCUS_06320	sequence1:692954..693415(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	34.2	49.3
MGA_633	LOCUS_06330	sequence1:693537..695423(-)	partial			WP_012775697.1	DUF6359 domain-containing protein	94.4	55.8	40.1
MGA_640	LOCUS_06400	sequence1:704010..704471(+)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	34.2	49.3
MGA_682	LOCUS_06820	sequence1:731216..731584(+)	partial			WP_001059647.1	ISL3 family transposase	91.8	25.3	49.1
MGA_689	LOCUS_06890	sequence1:737574..737735(+)	frameshift		737720	WP_002485388.1	zinc-binding alcohol dehydrogenase family protein	90.6	14.3	50.0
MGA_690	LOCUS_06900	sequence1:737732..738583(+)	frameshift		737720	WP_002485388.1	zinc-binding alcohol dehydrogenase family protein	97.5	82.4	61.7
MGA_702	LOCUS_07020	sequence1:751536..752336(+)	frameshift		752303	WP_000989088.1	iron chelate uptake ABC transporter family permease subunit	96.6	79.8	61.1
MGA_703	LOCUS_07030	sequence1:752356..752499(+)	frameshift		752306	WP_001829779.1	iron chelate uptake ABC transporter family permease subunit	100.0	14.6	74.5
MGA_713	LOCUS_07130	sequence1:761514..761831(+)	frameshift		761795	WP_000958531.1	Mrp/NBP35 family ATP-binding protein	91.4	27.1	71.9
MGA_714	LOCUS_07140	sequence1:761770..762576(+)	frameshift		761795	WP_000958531.1	Mrp/NBP35 family ATP-binding protein	96.6	73.2	85.3
MGA_731	LOCUS_07290	sequence1:785672..786574(+)	frameshift		786520	WP_011181618.1	pyrimidine-nucleoside phosphorylase	95.7	66.3	82.6
MGA_732	LOCUS_07300	sequence1:786555..786974(+)	frameshift		786532	WP_003243952.1	pyrimidine-nucleoside phosphorylase	99.3	31.9	65.2
MGA_735	LOCUS_07330	sequence1:788326..788937(+)	frameshift		788928	WP_002440552.1	M20 family metallopeptidase	98.0	50.5	75.9
MGA_736	LOCUS_07340	sequence1:789131..789511(+)	frameshift		788934	WP_002440552.1	M20 family metallopeptidase	92.9	29.7	78.6
MGA_737	LOCUS_07350	sequence1:789512..789982(+)	frameshift		789961	WP_000183717.1	hypothetical protein	94.9	37.5	63.1
MGA_738	LOCUS_07360	sequence1:790068..790703(+)	frameshift		789961	WP_002440553.1	hypothetical protein	100.0	53.3	65.9
MGA_754	LOCUS_07520	sequence1:808009..808803(+)	frameshift		808794	WP_000460242.1	peptide chain release factor 1	99.2	73.2	84.7
MGA_755	LOCUS_07530	sequence1:808763..809086(+)	frameshift		808794	WP_001829940.1	peptide chain release factor 1	92.5	27.7	87.9
MGA_784	LOCUS_07820	sequence1:832183..834678(+)	partial			WP_012775196.1	pneumococcal-type histidine triad protein	45.7	45.1	30.1
MGA_799	LOCUS_07970	sequence1:847814..848173(+)	frameshift		848149	WP_001294626.1	PH domain-containing protein	95.8	21.6	55.3
MGA_800	LOCUS_07980	sequence1:848202..849329(+)	frameshift		848155	WP_002457110.1	PH domain-containing protein	90.9	70.1	35.4
MGA_811	LOCUS_08090	sequence1:857473..857730(+)	internal_stop_codon	857728..857730(+)		WP_001829897.1	SprT family protein	100.0	56.3	70.6
MGA_813	LOCUS_08100	sequence1:863993..864454(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	34.2	49.3
MGA_816	LOCUS_08130	sequence1:866784..867647(-)	frameshift		867633	WP_001832489.1	3-isopropylmalate dehydratase large subunit	97.6	61.4	81.1
MGA_817	LOCUS_08140	sequence1:867619..868158(-)	frameshift		867636	WP_001832489.1	3-isopropylmalate dehydratase large subunit	97.2	38.2	81.0
MGA_818	LOCUS_08150	sequence1:868162..868719(-)	frameshift		868711	WP_000221945.1	3-isopropylmalate dehydrogenase	96.2	51.1	69.7
MGA_819	LOCUS_08160	sequence1:868700..869212(-)	frameshift		868711	WP_001830006.1	3-isopropylmalate dehydrogenase	100.0	49.0	61.2
MGA_820	LOCUS_08170	sequence1:869209..869676(-)	frameshift		869776	WP_000094583.1	2-isopropylmalate synthase	98.1	30.1	67.3
MGA_821	LOCUS_08180	sequence1:869753..870703(-)	frameshift		870674,869779	WP_001830007.1	2-isopropylmalate synthase	94.6	58.5	75.3
MGA_841	LOCUS_08380	sequence1:891554..893062(+)	partial			WP_000120296.1	SdrH family protein	54.0	59.5	36.9
MGA_849	LOCUS_08460	sequence1:901102..901752(-)	partial			WP_011251246.1	radical SAM protein	65.7	50.8	40.1
MGA_874	LOCUS_08710	sequence1:925334..925867(+)	frameshift		925852	WP_000040866.1	ammonia-dependent NAD(+) synthetase	96.6	62.3	72.5
MGA_875	LOCUS_08720	sequence1:925785..926162(+)	frameshift		925852	WP_000040866.1	ammonia-dependent NAD(+) synthetase	85.6	39.2	81.3
MGA_879	LOCUS_08760	sequence1:928452..928628(+)	frameshift		928486	WP_002440416.1	adenylosuccinate lyase	77.6	10.4	75.6
MGA_884	LOCUS_08810	sequence1:934234..935133(+)	frameshift		935392,935082,935396	WP_002484897.1	CamS family sex pheromone protein	93.3	69.4	65.9
MGA_885	LOCUS_08820	sequence1:935051..935566(+)	frameshift		935392,935082,935396	WP_000831700.1	CamS family sex pheromone protein	62.0	26.6	63.2
MGA_900	LOCUS_08970	sequence1:950251..950955(+)	internal_stop_codon	950953..950955(+)		WP_011476671.1	Gfo/Idh/MocA family oxidoreductase	100.0	63.1	74.4
MGA_901	LOCUS_08980	sequence1:950983..951375(+)	internal_stop_codon	950953..950955(+)		WP_011476671.1	Gfo/Idh/MocA family oxidoreductase	96.2	33.7	75.2
MGA_903	LOCUS_09000	sequence1:952860..954101(+)	internal_stop_codon	954099..954101(+)		WP_001042137.1	neuraminidase NanB	90.8	54.2	60.1
MGA_904	LOCUS_09010	sequence1:954156..954368(+)	internal_stop_codon	954099..954101(+)		WP_001042137.1	neuraminidase NanB	88.6	8.9	48.4
MGA_912	LOCUS_09090	sequence1:959862..960158(-)	frameshift		960195	WP_002485151.1	YihY/virulence factor BrkB family protein	69.4	21.4	42.9
MGA_913	LOCUS_09100	sequence1:960085..961122(-)	partial			WP_000037075.1	YihY/virulence factor BrkB family protein	89.9	73.8	56.1
MGA_941	LOCUS_09360	sequence1:992838..993083(-)	internal_stop_codon	993329..993331(-)		WP_001557163.1	ISL3-like element IS1181 family transposase	84.0	15.5	64.7
MGA_946	LOCUS_09410	sequence1:999039..999299(+)	partial			WP_001793998.1	tRNA epoxyqueuosine(34) reductase QueG	100.0	22.6	81.4
MGA_947	LOCUS_09420	sequence1:999296..999817(+)	frameshift		999796	WP_001793998.1	tRNA epoxyqueuosine(34) reductase QueG	96.5	43.9	88.6
MGA_948	LOCUS_09430	sequence1:999792..1000043(+)	frameshift		999796	WP_001829814.1	tRNA epoxyqueuosine(34) reductase QueG	96.4	21.3	76.2
MGA_956	LOCUS_09510	sequence1:1007675..1008136(+)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	34.2	48.7
MGA_962	LOCUS_09570	sequence1:1014277..1015182(+)	internal_stop_codon	1015180..1015182(+)		WP_000814809.1	dicarboxylate/amino acid:cation symporter	98.0	68.4	40.5
MGA_963	LOCUS_09580	sequence1:1015228..1015563(+)	internal_stop_codon	1015180..1015182(+)		WP_000814826.1	dicarboxylate/amino acid:cation symporter	91.9	24.8	60.8
MGA_972	LOCUS_09670	sequence1:1025419..1025880(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	34.2	49.3
MGA_991	LOCUS_09850	sequence1:1043056..1043739(+)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	97.8	50.3	42.6
MGA_994	LOCUS_09880	sequence1:1044618..1044821(-)	frameshift		1044892	WP_157582437.1	transposase	91.0	47.3	47.5
MGA_995	LOCUS_09890	sequence1:1045266..1046003(-)	internal_stop_codon	1045266..1045268(-)		WP_011082549.1	IS1182-like element ISSep1 family transposase	100.0	44.3	74.3
MGA_1003	LOCUS_09970	sequence1:1053398..1053550(+)	partial			WP_002262727.1	PTS ascorbate transporter subunit IIC	98.0	10.1	67.3
MGA_1007	LOCUS_10010	sequence1:1058242..1061172(+)	partial			WP_000841404.1	fibronectin-binding protein FnbB	67.3	75.1	25.8
MGA_1054	LOCUS_10480	sequence1:1104546..1104878(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	95.5	23.9	48.6
MGA_1061	LOCUS_10550	sequence1:1109576..1110355(+)	frameshift		1110316	WP_000118314.1	DNA translocase FtsK	99.2	23.9	31.1
MGA_1062	LOCUS_10560	sequence1:1110321..1112774(+)	frameshift		1110313	WP_002456455.1	DNA translocase FtsK	99.9	73.7	56.0
MGA_1073	LOCUS_10670	sequence1:1125990..1126964(+)	frameshift		1126958	WP_000186029.1	tyrosine--tRNA ligase	100.0	77.1	80.2
MGA_1074	LOCUS_10680	sequence1:1127026..1127253(+)	frameshift		1126961	WP_000186029.1	tyrosine--tRNA ligase	100.0	17.9	73.3
MGA_1079	LOCUS_10730	sequence1:1133026..1133865(-)	frameshift		1133845	WP_001830752.1	alanine--glyoxylate aminotransferase family protein	98.6	71.3	62.7
MGA_1080	LOCUS_10740	sequence1:1133837..1134187(-)	frameshift		1133851	WP_001830752.1	alanine--glyoxylate aminotransferase family protein	98.3	29.5	71.9
MGA_1084	LOCUS_10780	sequence1:1137208..1137540(+)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	95.5	23.9	48.6
MGA_1102	LOCUS_10960	sequence1:1154847..1155704(+)	frameshift		1155689,1154812	WP_001830890.1	DRTGG domain-containing protein	100.0	66.0	60.7
MGA_1103	LOCUS_10970	sequence1:1155679..1156053(+)	frameshift		1155692	WP_001830890.1	DRTGG domain-containing protein	96.0	27.5	58.8
MGA_1117	LOCUS_11110	sequence1:1176257..1176538(+)	frameshift		1176496	WP_001127167.1	dephospho-CoA kinase	87.1	39.1	65.4
MGA_1118	LOCUS_11120	sequence1:1176486..1176893(+)	frameshift		1176496	WP_002485286.1	dephospho-CoA kinase	91.1	60.6	72.4
MGA_1121	LOCUS_11150	sequence1:1178958..1180139(+)	frameshift		1180130	WP_001830762.1	DnaD domain protein	98.0	83.8	47.7
MGA_1133	LOCUS_11270	sequence1:1190305..1191054(+)	frameshift		1191036	WP_000472302.1	ATP-dependent Clp protease ATP-binding subunit ClpX	98.0	58.1	93.0
MGA_1134	LOCUS_11280	sequence1:1190975..1191568(+)	frameshift		1191036	WP_001830765.1	ATP-dependent Clp protease ATP-binding subunit ClpX	89.3	41.9	85.2
MGA_1147	LOCUS_11410	sequence1:1206550..1207011(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	34.2	48.0
MGA_1151	LOCUS_11450	sequence1:1208529..1208759(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	85.5	15.0	39.4
MGA_1152	LOCUS_11460	sequence1:1208654..1209034(-)	frameshift		1208648	WP_001557163.1	ISL3-like element IS1181 family transposase	71.4	20.5	51.1
MGA_1154	LOCUS_11480	sequence1:1210195..1210581(+)	frameshift,internal_stop_codon	1210709..1210711(+)	1210569	WP_001259925.1	rod shape-determining protein MreD	98.4	71.6	45.2
MGA_1173	LOCUS_11670	sequence1:1230125..1230391(+)	frameshift		1230120	WP_001830852.1	aspartate--tRNA ligase	98.9	14.8	81.6
MGA_1179	LOCUS_11730	sequence1:1234892..1235353(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	34.2	49.3
MGA_1211	LOCUS_12050	sequence1:1264880..1266637(+)	partial			WP_011082702.1	DNA internalization-related competence protein ComEC/Rec2	94.9	74.9	36.9
MGA_1219	LOCUS_12130	sequence1:1275305..1275787(+)	frameshift		1275763	WP_002468806.1	molecular chaperone DnaJ	94.4	39.7	76.2
MGA_1220	LOCUS_12140	sequence1:1275759..1276442(+)	frameshift		1275763	WP_001119021.1	molecular chaperone DnaJ	99.6	59.6	77.0
MGA_1224	LOCUS_12180	sequence1:1279795..1279971(+)	partial			WP_000048060.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1234	LOCUS_12280	sequence1:1286832..1287278(+)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	34.2	49.3
MGA_1246	LOCUS_12400	sequence1:1300407..1300808(+)	frameshift		1300781	WP_001831102.1	metal ABC transporter permease	94.0	44.3	81.6
MGA_1247	LOCUS_12410	sequence1:1300828..1301271(+)	frameshift		1300781	WP_001831102.1	metal ABC transporter permease	91.8	47.9	69.6
MGA_1252	LOCUS_12460	sequence1:1304182..1305738(+)	frameshift		1305711	WP_002456490.1	penicillin-binding protein 2	98.5	73.3	70.0
MGA_1253	LOCUS_12470	sequence1:1305773..1306162(+)	frameshift		1305714,1306117	WP_002456490.1	penicillin-binding protein 2	89.9	16.7	75.9
MGA_1267	LOCUS_12610	sequence1:1317551..1317910(+)	partial			WP_001831131.1	competence type IV pilus assembly protein ComGB	99.2	33.2	41.5
MGA_1295	LOCUS_12890	sequence1:1339951..1340088(+)	frameshift		1340064	WP_002440012.1	dihydrolipoyl dehydrogenase	82.2	7.8	73.0
MGA_1322	LOCUS_13160	sequence1:1366793..1367164(+)	frameshift		1367044	WP_002470635.1	ATP-dependent DNA helicase RecQ	69.9	19.0	70.1
MGA_1323	LOCUS_13170	sequence1:1367118..1368170(+)	frameshift		1367044	WP_002470635.1	ATP-dependent DNA helicase RecQ	99.7	76.0	56.2
MGA_1324	LOCUS_13180	sequence1:1368347..1368874(+)	frameshift		1368847	WP_107515759.1	elastin-binding protein EbpS	96.0	40.0	29.7
MGA_1325	LOCUS_13190	sequence1:1368840..1369679(+)	frameshift		1368868	WP_000069289.1	elastin-binding protein EbpS	94.3	53.7	27.8
MGA_1326	LOCUS_13200	sequence1:1370076..1370543(+)	frameshift		1370498	WP_001174258.1	YpdA family putative bacillithiol disulfide reductase	100.0	47.3	80.6
MGA_1327	LOCUS_13210	sequence1:1370509..1371063(+)	frameshift		1370498	WP_001174258.1	YpdA family putative bacillithiol disulfide reductase	99.5	55.8	76.5
MGA_1335	LOCUS_13290	sequence1:1378038..1378526(+)	frameshift,internal_stop_codon	1378750..1378752(+)	1378478	WP_000774684.1	demethylmenaquinone methyltransferase	90.7	61.0	79.6
MGA_1336	LOCUS_13300	sequence1:1378480..1378752(+)	frameshift,internal_stop_codon	1378750..1378752(+)	1378478	WP_000774684.1	demethylmenaquinone methyltransferase	97.8	36.5	73.9
MGA_1337	LOCUS_13310	sequence1:1378770..1379450(+)	frameshift		1379432	WP_001817755.1	polyprenyl synthetase family protein	96.0	69.4	70.6
MGA_1338	LOCUS_13320	sequence1:1379452..1379727(+)	frameshift		1379429	WP_001831120.1	polyprenyl synthetase family protein	97.8	27.9	51.7
MGA_1390	LOCUS_13840	sequence1:1431153..1432643(+)	frameshift		1432637	WP_002484818.1	VWA domain-containing protein	99.8	78.4	62.2
MGA_1391	LOCUS_13850	sequence1:1432636..1433049(+)	frameshift		1432637	WP_002484818.1	VWA domain-containing protein	87.6	19.1	83.3
MGA_1394	LOCUS_13880	sequence1:1434703..1435086(-)	frameshift		1435066,1434711	WP_002485276.1	toxic anion resistance protein	93.7	31.6	76.5
MGA_1395	LOCUS_13890	sequence1:1435049..1435753(-)	frameshift		1435069	WP_002485276.1	toxic anion resistance protein	93.2	55.9	52.3
MGA_1412	LOCUS_14060	sequence1:1450912..1451814(+)	partial			WP_010922662.1	lactose-specific PTS transporter subunit EIIC	97.3	51.9	53.9
MGA_1429	LOCUS_14230	sequence1:1459739..1460362(+)	partial			WP_001231960.1	ERF family protein	69.6	65.2	58.2
MGA_1435	LOCUS_14290	sequence1:1462685..1463902(+)	partial			WP_012028597.1	replicative DNA helicase	60.7	57.0	39.9
MGA_1445	LOCUS_14390	sequence1:1467088..1467246(+)	partial			WP_000195784.1	DUF1381 domain-containing protein	86.5	66.2	57.8
MGA_1455	LOCUS_14490	sequence1:1472917..1473516(+)	partial			WP_137615044.1	phage major capsid protein	75.9	29.5	45.7
MGA_1465	LOCUS_14590	sequence1:1478016..1480307(+)	internal_stop_codon	1480305..1480307(+)		WP_003271441.1	phage tail tape measure protein	77.6	44.6	29.9
MGA_1468	LOCUS_14620	sequence1:1481142..1483028(+)	partial			WP_000504568.1	phage tail tape measure protein	99.4	41.4	50.5
MGA_1471	LOCUS_14650	sequence1:1484851..1486260(+)	frameshift		1484714	WP_000582139.1	phage tail spike protein	98.3	36.3	68.8
MGA_1472	LOCUS_14660	sequence1:1486279..1488216(+)	frameshift		1488201	WP_000582139.1	phage tail spike protein	91.9	47.1	60.8
MGA_1473	LOCUS_14670	sequence1:1488287..1488649(+)	frameshift		1488207	WP_000582152.1	phage tail spike protein	97.5	9.3	52.1
MGA_1476	LOCUS_14700	sequence1:1489626..1489952(+)	frameshift		1489621	WP_000354127.1	phage holin	90.7	74.5	43.5
MGA_1477	LOCUS_14710	sequence1:1489954..1490523(+)	frameshift		1490499	WP_001148136.1	SH3 domain-containing protein	98.9	37.6	66.3
MGA_1478	LOCUS_14720	sequence1:1490543..1491412(+)	frameshift		1490514	WP_001148136.1	SH3 domain-containing protein	99.7	59.9	71.5
MGA_1481	LOCUS_14750	sequence1:1493177..1493737(+)	partial			WP_001795785.1	hypothetical protein	30.6	78.4	58.6
MGA_1483	LOCUS_14770	sequence1:1494021..1494608(+)	partial			WP_011669017.1	lactose-specific PTS transporter subunit EIIC	94.4	35.9	45.0
MGA_1517	LOCUS_15110	sequence1:1538685..1538912(-)	partial			WP_001548645.1	YneF family protein	76.0	60.0	66.7
MGA_1539	LOCUS_15330	sequence1:1559099..1559605(-)	partial			WP_002681291.1	type II CRISPR-associated endonuclease Cas1	94.6	51.7	42.5
MGA_1541	LOCUS_15350	sequence1:1561107..1561562(-)	partial			WP_002989953.1	type II CRISPR-associated endonuclease Cas1	75.5	39.4	33.3
MGA_1542	LOCUS_15360	sequence1:1561562..1563628(-)	frameshift		1563710	WP_001040087.1	type II CRISPR RNA-guided endonuclease Cas9	50.1	26.4	28.6
MGA_1543	LOCUS_15370	sequence1:1563693..1564739(-)	partial			WP_002864485.1	type II CRISPR RNA-guided endonuclease Cas9	95.4	34.2	22.9
MGA_1559	LOCUS_15530	sequence1:1577801..1578301(+)	partial			WP_011082672.1	tyrosine-type recombinase/integrase	41.0	84.0	80.9
MGA_1632	LOCUS_16260	sequence1:1661482..1662657(+)	partial			WP_002468914.1	YfhO family protein	95.9	43.3	49.6
MGA_1642	LOCUS_16360	sequence1:1673003..1675768(-)	frameshift		1675799	WP_001833035.1	chromosome segregation protein SMC	99.8	77.3	56.0
MGA_1643	LOCUS_16370	sequence1:1675779..1676573(-)	frameshift		1675802	WP_001833035.1	chromosome segregation protein SMC	97.7	21.7	76.0
MGA_1648	LOCUS_16420	sequence1:1679772..1680119(-)	frameshift		1680162	WP_000239753.1	phosphate acyltransferase PlsX	100.0	35.1	66.1
MGA_1649	LOCUS_16430	sequence1:1680160..1680750(-)	frameshift		1680162	WP_001830112.1	phosphate acyltransferase PlsX	100.0	60.3	78.1
MGA_1665	LOCUS_16590	sequence1:1695581..1696108(-)	frameshift		1696211	WP_002439455.1	methionyl-tRNA formyltransferase	98.3	55.5	61.6
MGA_1666	LOCUS_16600	sequence1:1696176..1696514(-)	frameshift		1696211	WP_002439455.1	methionyl-tRNA formyltransferase	89.3	32.3	80.0
MGA_1670	LOCUS_16640	sequence1:1698710..1698958(-)	frameshift		1699052	WP_000560839.1	primosomal protein N'	100.0	10.2	75.6
MGA_1671	LOCUS_16650	sequence1:1698975..1699526(-)	frameshift		1699545,1699049	WP_001830152.1	primosomal protein N'	87.4	20.0	78.8
MGA_1672	LOCUS_16660	sequence1:1699540..1701120(-)	frameshift		1699545	WP_001830152.1	primosomal protein N'	99.8	65.5	69.7
MGA_1700	LOCUS_16940	sequence1:1733605..1734213(-)	frameshift		1734268	WP_012972486.1	MurR/RpiR family transcriptional regulator	95.5	71.7	67.4
MGA_1701	LOCUS_16950	sequence1:1734263..1734439(-)	frameshift		1734268	WP_012972486.1	MurR/RpiR family transcriptional regulator	98.3	21.2	57.9
MGA_1708	LOCUS_17020	sequence1:1740520..1741467(-)	partial			WP_002470268.1	FtsQ-type POTRA domain-containing protein	79.4	53.6	44.0
MGA_1719	LOCUS_17130	sequence1:1752056..1752583(+)	frameshift		1752499	WP_003243582.1	Ktr system potassium transporter KtrB	85.1	33.5	46.3
MGA_1720	LOCUS_17140	sequence1:1752693..1753148(+)	frameshift		1752502	WP_001045079.1	TrkH family potassium uptake protein	100.0	34.9	34.9
MGA_1734	LOCUS_17280	sequence1:1769045..1770556(-)	frameshift		1770557	WP_001833037.1	endonuclease MutS2	100.0	64.3	77.5
MGA_1735	LOCUS_17290	sequence1:1770546..1771394(-)	frameshift		1770560	WP_001249275.1	endonuclease MutS2	98.9	35.7	68.8
MGA_1740	LOCUS_17340	sequence1:1775415..1776074(-)	frameshift		1776063	WP_002485127.1	phenylalanine--tRNA ligase subunit beta	98.6	27.0	67.6
MGA_1741	LOCUS_17350	sequence1:1776058..1777821(-)	frameshift		1776069	WP_000908969.1	phenylalanine--tRNA ligase subunit beta	99.8	73.2	73.7
MGA_1762	LOCUS_17560	sequence1:1796277..1796987(-)	partial			WP_095092556.1	IS1182 family transposase	64.8	31.4	54.5
MGA_1786	LOCUS_17800	sequence1:1820101..1820319(-)	frameshift		1820428	WP_000638459.1	cytochrome d ubiquinol oxidase subunit II	91.7	19.5	59.1
MGA_1787	LOCUS_17810	sequence1:1820426..1821130(-)	frameshift		1820431	WP_002485881.1	cytochrome d ubiquinol oxidase subunit II	100.0	68.9	66.2
MGA_1790	LOCUS_17840	sequence1:1823042..1823596(-)	frameshift		1823606	WP_000040051.1	phosphoenolpyruvate--protein phosphotransferase	97.3	31.3	84.4
MGA_1791	LOCUS_17850	sequence1:1823571..1824764(-)	frameshift		1823609	WP_001831740.1	phosphoenolpyruvate--protein phosphotransferase	98.7	68.7	79.6
MGA_1806	LOCUS_18000	sequence1:1840926..1841465(-)	frameshift		1841484	WP_000666806.1	phosphoribosylformylglycinamidine synthase I	99.4	79.8	84.3
MGA_1807	LOCUS_18010	sequence1:1841437..1841598(-)	frameshift		1841484	WP_000666806.1	phosphoribosylformylglycinamidine synthase I	71.7	17.0	92.1
MGA_1822	LOCUS_18160	sequence1:1855116..1855712(-)	partial			WP_000769722.1	PepSY domain-containing protein	42.9	53.7	35.9
MGA_1824	LOCUS_18180	sequence1:1857227..1858138(-)	partial			WP_003227930.1	teichoic acids export ABC transporter ATP-binding subunit TagH	89.4	50.5	47.6
MGA_1831	LOCUS_18250	sequence1:1862784..1863842(-)	partial			WP_012027231.1	glycosyltransferase family 2 protein	33.8	35.9	38.8
MGA_1837	LOCUS_18310	sequence1:1867575..1867886(-)	frameshift		1867911	WP_000779504.1	type 8 capsular polysaccharide synthesis protein Cap8O	95.1	23.3	61.2
MGA_1838	LOCUS_18320	sequence1:1867894..1868838(-)	frameshift		1867911	WP_000779504.1	type 8 capsular polysaccharide synthesis protein Cap8O	98.7	73.8	79.0
MGA_1843	LOCUS_18370	sequence1:1873919..1875037(+)	frameshift		1875034,1875074	WP_002485275.1	glucosaminidase domain-containing protein	100.0	28.5	31.8
MGA_1844	LOCUS_18380	sequence1:1875070..1877892(+)	frameshift		1875074,1875031	WP_001074534.1	glucosaminidase domain-containing protein	99.5	76.9	50.2
MGA_1845	LOCUS_18390	sequence1:1878144..1878374(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	85.5	15.0	39.4
MGA_1846	LOCUS_18400	sequence1:1878269..1878649(-)	frameshift		1878263	WP_001557163.1	ISL3-like element IS1181 family transposase	71.4	20.5	53.3
MGA_1860	LOCUS_18540	sequence1:1892669..1892899(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	86.8	15.0	62.1
MGA_1861	LOCUS_18550	sequence1:1892794..1893174(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	71.4	20.5	51.1
MGA_1867	LOCUS_18610	sequence1:1897497..1900721(+)	partial			WP_000610237.1	MSCRAMM family adhesin SdrE	77.3	70.5	33.7
MGA_1872	LOCUS_18660	sequence1:1905797..1906195(+)	frameshift		1906159	WP_001831904.1	D-alanyl-lipoteichoic acid biosynthesis protein DltD	85.6	27.9	42.6
MGA_1873	LOCUS_18670	sequence1:1906161..1906946(+)	frameshift		1906159	WP_001831904.1	D-alanyl-lipoteichoic acid biosynthesis protein DltD	97.7	62.9	40.8
MGA_1874	LOCUS_18680	sequence1:1907215..1907445(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	86.8	15.0	62.1
MGA_1875	LOCUS_18690	sequence1:1907340..1907720(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	71.4	20.5	51.1
MGA_1884	LOCUS_18780	sequence1:1918753..1919214(+)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	34.2	48.7
MGA_1898	LOCUS_18920	sequence1:1932741..1933427(+)	frameshift		1932727	WP_000896697.1	protease adaptor protein YjbH	99.6	84.7	78.4
MGA_1899	LOCUS_18930	sequence1:1933901..1935247(-)	frameshift		1935230	WP_002485413.1	oligoendopeptidase F	99.1	73.8	85.4
MGA_1900	LOCUS_18940	sequence1:1935219..1935710(-)	frameshift		1935233	WP_002485413.1	oligoendopeptidase F	99.4	26.9	74.7
MGA_1903	LOCUS_18970	sequence1:1938366..1938707(+)	internal_stop_codon	1938363..1938365(+)		WP_000358995.1	thioredoxin-dependent arsenate reductase	91.2	78.6	82.5
MGA_1904	LOCUS_18980	sequence1:1938913..1939470(-)	frameshift		1939567	WP_001217728.1	adaptor protein MecA	98.4	79.9	59.9
MGA_1968	LOCUS_19620	sequence1:2008887..2009078(+)	frameshift,internal_stop_codon	2009305..2009307(+)	2009066,2009244	WP_141741171.1	IS3 family transposase	88.9	12.1	49.1
MGA_1970	LOCUS_19640	sequence1:2009425..2009553(-)	frameshift		2009439	WP_000267236.1	nitronate monooxygenase family protein	97.6	11.5	63.4
MGA_1972	LOCUS_19660	sequence1:2011027..2011383(-)	partial			WP_000426696.1	CPBP family intramembrane metalloprotease SdpB	83.1	40.0	45.9
MGA_1993	LOCUS_19870	sequence1:2028728..2029639(-)	frameshift		2029655	WP_002439305.1	serine hydrolase domain-containing protein	98.7	75.0	58.0
MGA_2000	LOCUS_19940	sequence1:2035050..2035262(-)	frameshift		2035064,2034899	WP_011254348.1	MFS transporter	85.7	14.8	40.0
MGA_2002	LOCUS_19960	sequence1:2037200..2037490(+)	frameshift		2037418	WP_002041469.1	SAR2788 family putative toxin	87.5	35.2	35.7
MGA_2008	LOCUS_20020	sequence1:2040868..2041113(-)	frameshift		2041108	WP_001050048.1	ribonuclease R	80.2	8.7	47.8
MGA_2036	LOCUS_20300	sequence1:2071442..2072005(-)	frameshift		2071474	WP_002468687.1	HD domain-containing protein	96.8	85.0	89.5
MGA_2043	LOCUS_20370	sequence1:2080819..2081097(+)	frameshift		2081076	WP_000192949.1	YigZ family protein	95.7	41.3	77.3
MGA_2045	LOCUS_20390	sequence1:2081720..2082520(-)	frameshift		2082521	WP_001829686.1	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	100.0	74.1	77.4
MGA_2046	LOCUS_20400	sequence1:2082513..2082773(-)	frameshift		2082521	WP_001829686.1	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	97.7	23.4	69.0
MGA_2064	LOCUS_20580	sequence1:2098927..2099157(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	86.8	15.0	62.1
MGA_2065	LOCUS_20590	sequence1:2099052..2099432(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	71.4	20.5	52.2
MGA_2080	LOCUS_20740	sequence1:2118904..2119893(-)	partial			WP_048066275.1	PKD domain-containing protein	75.4	14.6	34.0
MGA_2081	LOCUS_20750	sequence1:2120358..2121038(-)	frameshift		2120372	WP_003548693.1	DUF1002 domain-containing protein	87.6	64.2	38.5
MGA_2086	LOCUS_20800	sequence1:2123172..2123786(+)	internal_stop_codon	2123784..2123786(+)		WP_001557163.1	ISL3-like element IS1181 family transposase	96.6	44.6	44.9
MGA_2087	LOCUS_20810	sequence1:2123829..2124497(+)	internal_stop_codon	2123784..2123786(+)		WP_001059647.1	ISL3 family transposase	98.2	49.5	50.0
MGA_2088	LOCUS_20820	sequence1:2124650..2125672(-)	frameshift		2125694	WP_000098285.1	polyglycerol-phosphate lipoteichoic acid synthase LtaS	100.0	52.6	78.2
MGA_2089	LOCUS_20830	sequence1:2125680..2126591(-)	frameshift		2125697	WP_002484992.1	polyglycerol-phosphate lipoteichoic acid synthase LtaS	98.7	46.3	79.9
MGA_2091	LOCUS_20850	sequence1:2127999..2128460(-)	frameshift		2128465	WP_000708690.1	allophanate hydrolase subunit 1	94.1	61.0	50.0
MGA_2092	LOCUS_20860	sequence1:2128457..2128678(-)	frameshift		2128465	WP_000708690.1	allophanate hydrolase subunit 1	97.3	30.1	57.7
MGA_2147	LOCUS_21410	sequence1:2181057..2181791(-)	internal_stop_codon	2181879..2181881(-)		WP_001180222.1	NADP-dependent oxidoreductase	99.6	73.0	66.7
MGA_2148	LOCUS_21420	sequence1:2181879..2182061(-)	internal_stop_codon	2181879..2181881(-)		WP_001829756.1	NADP-dependent oxidoreductase	100.0	18.0	61.7
MGA_2164	LOCUS_21580	sequence1:2196469..2196663(-)	frameshift		2196703	WP_002438830.1	alpha/beta hydrolase	100.0	19.8	58.0
MGA_2165	LOCUS_21590	sequence1:2196644..2197495(-)	frameshift		2196703	WP_002438830.1	alpha/beta hydrolase	92.9	76.5	58.1
MGA_2167	LOCUS_21610	sequence1:2199232..2199414(-)	internal_stop_codon	2199507..2199509(-)		WP_001557163.1	ISL3-like element IS1181 family transposase	65.0	8.9	61.5
MGA_2176	LOCUS_21700	sequence1:2207062..2208747(+)	frameshift		2208594	WP_000432915.1	ferrous iron transport protein B	91.8	77.7	66.3
MGA_2177	LOCUS_21710	sequence1:2208695..2209057(+)	frameshift		2208591	WP_003722364.1	ferrous iron transport protein B	93.3	16.9	68.8
MGA_2233	LOCUS_22270	sequence1:2258885..2259082(-)	internal_stop_codon	2258885..2258887(-)		WP_001557163.1	ISL3-like element IS1181 family transposase	100.0	14.8	50.8
MGA_2237	LOCUS_22310	sequence1:2262164..2263183(+)	frameshift		2262162	WP_003245503.1	3-dehydro-glucose-6-phosphate--glutamate transaminase	98.5	78.0	50.6
MGA_2242	LOCUS_22360	sequence1:2266928..2267284(-)	frameshift		2267276	WP_001109873.1	flavin reductase family protein	98.3	50.4	91.4
MGA_2243	LOCUS_22370	sequence1:2267274..2267612(-)	frameshift		2267279	WP_001109873.1	flavin reductase family protein	100.0	48.7	95.5
MGA_2257	LOCUS_22510	sequence1:2278087..2278548(+)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	34.2	48.0
MGA_2260	LOCUS_22540	sequence1:2281728..2282171(-)	frameshift		2282224,2282166	WP_000250823.1	glycine C-acetyltransferase	98.6	36.7	82.8
MGA_2261	LOCUS_22550	sequence1:2282213..2282917(-)	frameshift		2282224,2282166	WP_000250823.1	glycine C-acetyltransferase	98.7	58.5	93.1
MGA_2262	LOCUS_22560	sequence1:2283027..2283584(+)	frameshift		2283557	WP_002494717.1	M20 family metallopeptidase	96.8	46.3	65.6
MGA_2263	LOCUS_22570	sequence1:2283565..2284194(+)	frameshift		2283557	WP_002494717.1	M20 family metallopeptidase	100.0	53.7	71.3
MGA_2272	LOCUS_22660	sequence1:2294230..2296095(-)	frameshift		2296087	WP_002438689.1	DNA-directed RNA polymerase subunit beta'	99.5	51.6	90.5
MGA_2273	LOCUS_22670	sequence1:2296073..2297851(-)	frameshift		2296090	WP_002438689.1	DNA-directed RNA polymerase subunit beta'	97.8	48.3	93.6
MGA_2289	LOCUS_22830	sequence1:2312517..2312768(-)	frameshift		2312775	WP_005687916.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	98.8	51.9	59.8
MGA_2290	LOCUS_22840	sequence1:2312749..2312997(-)	frameshift		2312775	WP_000488386.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	97.6	50.6	68.8
MGA_2294	LOCUS_22880	sequence1:2316573..2317184(-)	frameshift		2317173	WP_000897132.1	ATP-dependent Clp protease ATP-binding subunit	98.0	24.3	80.4
MGA_2295	LOCUS_22890	sequence1:2317150..2319033(-)	frameshift		2317173	WP_002445729.1	ATP-dependent Clp protease ATP-binding subunit	99.5	76.4	92.1
MGA_2300	LOCUS_22940	sequence1:2322477..2322911(-)	frameshift,internal_stop_codon	2322912..2322914(-)	2323140	WP_001059647.1	ISL3 family transposase	95.8	31.3	46.4
MGA_2301	LOCUS_22950	sequence1:2322912..2323067(-)	frameshift,internal_stop_codon	2322912..2322914(-)	2323140	WP_102866030.1	ISL3-like element IS1476 family transposase	98.0	12.5	60.4
MGA_2302	LOCUS_22960	sequence1:2323030..2323797(-)	frameshift,internal_stop_codon	2322912..2322914(-)	2323143	WP_001557163.1	ISL3-like element IS1181 family transposase	85.9	49.7	44.5
MGA_2309	LOCUS_23010	sequence1:2341697..2342911(-)	frameshift		2342969	WP_001288202.1	lysine--tRNA ligase	100.0	81.6	87.1
MGA_2310	LOCUS_23020	sequence1:2342967..2343185(-)	frameshift		2342969	WP_001288202.1	lysine--tRNA ligase	100.0	14.5	72.2
MGA_2311	LOCUS_23030	sequence1:2343544..2343849(-)	frameshift		2343862	WP_001832213.1	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	99.0	62.9	60.0
MGA_2312	LOCUS_23040	sequence1:2343839..2344024(-)	frameshift		2343862	WP_000613722.1	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	93.4	36.1	66.7
MGA_2335	LOCUS_23270	sequence1:2367315..2368016(-)	frameshift		2367326	WP_001832224.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	98.7	77.7	82.6
MGA_2357	LOCUS_23480	sequence1:2390816..2391862(-)	internal_stop_codon	2392145..2392147(-)		WP_000279361.1	PTS system trehalose-specific EIIBC component	98.3	71.8	71.6
MGA_2358	LOCUS_23490	sequence1:2392682..2393032(+)	frameshift		2393025	WP_001557163.1	ISL3-like element IS1181 family transposase	77.6	20.5	52.2
MGA_2365	LOCUS_23560	sequence1:2405107..2405601(-)	partial			WP_002455937.1	hypothetical protein	53.0	49.7	40.2
MGA_2369	LOCUS_23600	sequence1:2408793..2409248(-)	frameshift		2409273,2409276	WP_001170264.1	autolysin/adhesin Aaa	100.0	45.5	65.1
MGA_2370	LOCUS_23610	sequence1:2409151..2409975(-)	frameshift		2409273	WP_001170264.1	autolysin/adhesin Aaa	72.3	61.7	63.6
MGA_2373	LOCUS_23640	sequence1:2412452..2412874(+)	partial			WP_011057519.1	GNAT family N-acetyltransferase	76.4	64.9	32.8
MGA_2386	LOCUS_23770	sequence1:2426546..2426911(+)	frameshift		2426890	WP_000793164.1	DUF3021 domain-containing protein	96.7	77.5	46.2
MGA_2388	LOCUS_23790	sequence1:2427801..2428235(+)	partial			WP_003244748.1	heme-degrading oxygenase HmoB	77.8	66.9	35.7
MGA_2389	LOCUS_23800	sequence1:2428407..2428643(-)	frameshift		2428902	WP_000675401.1	MFS transporter	93.6	18.4	69.9
MGA_2390	LOCUS_23810	sequence1:2428585..2429592(-)	frameshift		2428902	WP_000675401.1	MFS transporter	68.7	57.9	70.0
MGA_2395	LOCUS_23860	sequence1:2432967..2433431(-)	frameshift		2433405	WP_001229087.1	staphylopine-dependent metal ABC transporter substrate-binding protein CntA	95.5	27.6	63.3
MGA_2396	LOCUS_23870	sequence1:2433394..2434566(-)	frameshift		2433408	WP_001229087.1	staphylopine-dependent metal ABC transporter substrate-binding protein CntA	100.0	73.3	63.8
MGA_2397	LOCUS_23880	sequence1:2434710..2435777(-)	frameshift		2435733	WP_000040588.1	staphylopine dehydrogenase CntM	93.8	76.9	58.3
MGA_2398	LOCUS_23890	sequence1:2435707..2436003(-)	frameshift		2435733	WP_000040588.1	staphylopine dehydrogenase CntM	91.8	20.6	42.2
MGA_2407	LOCUS_23980	sequence1:2444323..2444565(-)	frameshift		2444581	WP_000943819.1	YSIRK domain-containing triacylglycerol lipase Lip2/Geh	100.0	11.6	63.8
MGA_2411	LOCUS_24020	sequence1:2447633..2447857(-)	partial			WP_000687954.1	DsbA family oxidoreductase	83.8	25.9	52.4
MGA_2421	LOCUS_24120	sequence1:2452697..2453410(-)	frameshift,internal_stop_codon	2453407..2453409(-)	2453394	WP_001059647.1	ISL3 family transposase	95.8	51.6	50.2
MGA_2422	LOCUS_24130	sequence1:2453407..2454015(-)	frameshift,internal_stop_codon	2453407..2453409(-)	2453394	WP_001557163.1	ISL3-like element IS1181 family transposase	98.0	44.9	44.2
MGA_2423	LOCUS_24140	sequence1:2454355..2454840(+)	frameshift		2454368	WP_002182762.1	4'-phosphopantetheinyl transferase superfamily protein	91.3	68.8	45.0
MGA_2425	LOCUS_24160	sequence1:2455491..2455853(+)	partial			WP_011023062.1	IS21-like element ISMac9 family transposase	91.7	25.6	36.9
MGA_2433	LOCUS_24240	sequence1:2463535..2463894(-)	partial			WP_011031828.1	non-ribosomal peptide synthetase	76.5	4.9	29.7
MGA_2435	LOCUS_24260	sequence1:2464465..2464614(+)	partial			WP_011987066.1	LD-carboxypeptidase	100.0	14.2	59.2
MGA_2442	LOCUS_24330	sequence1:2472106..2472705(+)	partial			WP_001829387.1	hypothetical protein	98.5	62.7	61.2
MGA_2455	LOCUS_24460	sequence1:2485361..2486101(-)	internal_stop_codon	2485307..2485309(-),2485361..2485363(-)		WP_002368573.1	adenosine deaminase	98.0	72.7	42.5
MGA_2462	LOCUS_24530	sequence1:2491196..2491471(-)	frameshift		2491469	WP_001039454.1	serine protease SplB	97.8	37.1	50.6
MGA_2463	LOCUS_24540	sequence1:2491434..2491853(-)	frameshift,internal_stop_codon	2491866..2491868(-)	2491469	WP_001039427.1	serine protease SplA	100.0	58.7	45.3
MGA_2478	LOCUS_24690	sequence1:2506812..2507015(+)	frameshift		2507012	WP_001829423.1	YceI family protein	100.0	39.2	61.2
MGA_2479	LOCUS_24700	sequence1:2507171..2507326(+)	frameshift		2507012	WP_001829423.1	YceI family protein	98.0	29.2	70.0
MGA_2484	LOCUS_24750	sequence1:2510713..2510862(-)	internal_stop_codon	2510713..2510715(-)		WP_001106006.1	IS6-like element IS257 family transposase	100.0	21.9	91.8
MGA_2485	LOCUS_24760	sequence1:2511515..2512207(-)	partial			WP_001106654.1	hypothetical protein	65.2	79.9	42.4
MGA_2494	LOCUS_24850	sequence1:2521137..2521322(-)	frameshift		2521341	WP_001832522.1	ribonuclease P protein component	100.0	53.0	73.8
MGA_2495	LOCUS_24860	sequence1:2521327..2521485(-)	frameshift		2521341	WP_001832522.1	ribonuclease P protein component	100.0	45.2	75.0
MGA_2496	LOCUS_24870	sequence1:2521570..2521707(-)	partial			WP_000240855.1	50S ribosomal protein L34	60.0	60.0	100.0