# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_15	LOCUS_00140	sequence1:16219..16344(+)	frameshift		16335	WP_000764052.1	ABC transporter permease	95.1	11.4	89.7
MGA_20	LOCUS_00180	sequence1:24843..25175(-)	frameshift		25257	WP_150880979.1	ISL3 family transposase	100.0	27.0	65.5
MGA_21	LOCUS_00190	sequence1:25177..25761(-)	frameshift		25257	WP_150880979.1	ISL3 family transposase	93.3	44.4	60.2
MGA_44	LOCUS_00420	sequence1:45970..46554(+)	partial			WP_000734042.1	hypothetical protein	72.7	72.7	33.3
MGA_51	LOCUS_00490	sequence1:51565..51738(-)	frameshift,internal_stop_codon	51564..51566(-)	51464,51812	WP_126417900.1	ISL3 family transposase	100.0	14.0	87.7
MGA_52	LOCUS_00500	sequence1:51747..52220(-)	frameshift,internal_stop_codon	52254..52256(-),51564..51566(-)	51464,51812	WP_150880979.1	ISL3 family transposase	87.3	33.6	79.6
MGA_59	LOCUS_00570	sequence1:56852..57808(+)	partial			WP_012582624.1	diguanylate cyclase	60.1	42.2	33.2
MGA_90	LOCUS_00880	sequence1:91136..91747(-)	frameshift,internal_stop_codon	91818..91820(-)	91727	WP_002354705.1	MurR/RpiR family transcriptional regulator	89.2	63.5	28.6
MGA_92	LOCUS_00900	sequence1:92159..92545(+)	frameshift		92515	WP_010906086.1	6-phospho-beta-glucosidase	96.1	25.8	65.0
MGA_93	LOCUS_00910	sequence1:92542..93030(+)	frameshift		92992,92518	WP_002262239.1	6-phospho-beta-glucosidase	93.2	31.6	60.3
MGA_94	LOCUS_00920	sequence1:92994..93578(+)	frameshift		93000	WP_010906086.1	6-phospho-beta-glucosidase	99.0	40.5	68.4
MGA_120	LOCUS_01180	sequence1:121321..121635(+)	partial			WP_002983650.1	DNA-directed RNA polymerase subunit omega	69.2	68.6	93.1
MGA_136	LOCUS_01340	sequence1:137976..138194(-)	internal_stop_codon	138243..138245(-)		WP_120719025.1	IS3 family transposase	98.6	15.8	91.5
MGA_137	LOCUS_01350	sequence1:138243..138695(-)	internal_stop_codon	138243..138245(-)		WP_120719025.1	IS3 family transposase	82.0	27.6	56.7
MGA_141	LOCUS_01370	sequence1:151894..152319(+)	partial			WP_002263142.1	rod shape-determining protein MreC	100.0	52.2	45.8
MGA_142	LOCUS_01380	sequence1:152450..152827(+)	partial			WP_002894318.1	rod shape-determining protein MreD	90.4	68.1	32.7
MGA_197	LOCUS_01920	sequence1:204544..204951(+)	partial			WP_172450158.1	IS3 family transposase	74.1	22.4	71.0
MGA_198	LOCUS_01930	sequence1:204915..205133(+)	partial			WP_120719025.1	IS3 family transposase	98.6	15.8	90.1
MGA_213	LOCUS_02070	sequence1:228415..228606(+)	partial			WP_002901715.1	competence type IV pilus minor pilin ComGE	98.4	63.9	40.3
MGA_238	LOCUS_02320	sequence1:250214..250774(+)	frameshift		250675	WP_000724426.1	ABC transporter substrate-binding protein	82.3	48.1	68.2
MGA_243	LOCUS_02370	sequence1:255226..255573(+)	frameshift		255561,255675	WP_002263840.1	Rgg/GadR/MutR family transcriptional regulator	96.5	39.2	50.9
MGA_277	LOCUS_02710	sequence1:287282..288523(-)	frameshift		288639	WP_010922527.1	glycoside hydrolase family 1 protein	95.9	82.5	64.4
MGA_279	LOCUS_02730	sequence1:288879..289067(+)	internal_stop_codon	289065..289067(+)		WP_014748651.1	PTS cellobiose transporter subunit IIC	100.0	14.7	67.7
MGA_280	LOCUS_02740	sequence1:289107..290147(+)	internal_stop_codon	289065..289067(+)		WP_014748651.1	PTS cellobiose transporter subunit IIC	99.1	81.1	75.5
MGA_283	LOCUS_02770	sequence1:292044..292484(+)	partial			WP_109289924.1	IS3 family transposase	88.4	28.7	69.8
MGA_284	LOCUS_02780	sequence1:292444..292962(-)	partial			WP_002287874.1	3-methyl-2-oxobutanoate hydroxymethyltransferase	88.4	55.3	65.1
MGA_285	LOCUS_02790	sequence1:293122..293457(-)	frameshift		293528	WP_013229170.1	cellulase family glycosylhydrolase	99.1	14.6	46.4
MGA_286	LOCUS_02800	sequence1:293385..294260(-)	frameshift		293528	WP_013229170.1	cellulase family glycosylhydrolase	61.2	24.2	37.5
MGA_289	LOCUS_02830	sequence1:296341..296610(+)	partial			WP_002288769.1	SGNH/GDSL hydrolase family protein	89.9	35.7	43.8
MGA_290	LOCUS_02840	sequence1:296700..297437(+)	partial			WP_109290171.1	acetylxylan esterase	98.8	74.8	45.9
MGA_296	LOCUS_02900	sequence1:303681..304313(-)	internal_stop_codon	304431..304433(-)		WP_002262870.1	AraC family transcriptional regulator	98.6	74.5	52.7
MGA_297	LOCUS_02910	sequence1:304621..304920(+)	partial			WP_002262871.1	alpha-galactosidase	88.9	12.2	68.2
MGA_298	LOCUS_02920	sequence1:304898..305218(+)	partial			WP_011836859.1	sucrose phosphorylase	99.1	21.8	68.6
MGA_327	LOCUS_03210	sequence1:338376..338507(+)	internal_stop_codon	338505..338507(+)		WP_000143135.1	DegV family protein	69.8	10.5	70.0
MGA_328	LOCUS_03220	sequence1:338562..339275(+)	internal_stop_codon	338505..338507(+)		WP_002262997.1	DegV family protein	100.0	82.9	71.3
MGA_364	LOCUS_03570	sequence2:944..1120(-)	frameshift		1360,1040,1061,1125	WP_002263684.1	DUF402 domain-containing protein	62.1	20.3	83.3
MGA_365	LOCUS_03580	sequence2:1117..1251(-)	frameshift		1360,1040,1061,1125	WP_002263684.1	DUF402 domain-containing protein	95.5	23.7	95.2
MGA_366	LOCUS_03590	sequence2:1565..1798(-)	partial			WP_011837398.1	recombination regulator RecX	100.0	29.8	63.6
MGA_367	LOCUS_03600	sequence2:2135..2341(-)	frameshift		2106,2155	WP_011837398.1	recombination regulator RecX	91.2	24.0	77.4
MGA_389	LOCUS_03820	sequence2:25612..26052(+)	partial			WP_109289924.1	IS3 family transposase	88.4	28.7	69.8
MGA_432	LOCUS_04250	sequence2:70469..70696(+)	internal_stop_codon	70400..70402(+)		WP_003642392.1	L,D-transpeptidase	97.3	33.8	44.6
MGA_444	LOCUS_04370	sequence2:79480..80100(+)	frameshift,internal_stop_codon	80314..80316(+)	80034	WP_126417900.1	ISL3 family transposase	85.4	43.1	74.4
MGA_445	LOCUS_04380	sequence2:80109..80315(+)	frameshift,internal_stop_codon	80314..80316(+)	80034	WP_126417900.1	ISL3 family transposase	100.0	16.7	85.3
MGA_449	LOCUS_04420	sequence2:84302..86185(+)	partial			WP_000796568.1	heavy metal translocating P-type ATPase	93.8	73.7	49.9
MGA_450	LOCUS_04430	sequence2:86503..86661(+)	frameshift		86501,86486	WP_011675022.1	multidrug efflux SMR transporter	98.1	48.1	51.0
MGA_456	LOCUS_04490	sequence2:92328..93407(+)	partial			WP_010774225.1	DUF6056 family protein	98.9	61.4	25.8
MGA_475	LOCUS_04680	sequence2:113963..114505(+)	internal_stop_codon	113927..113929(+),114503..114505(+)		WP_002287391.1	YebC/PmpR family DNA-binding transcriptional regulator	99.4	74.2	62.0
MGA_491	LOCUS_04840	sequence2:129925..130620(+)	internal_stop_codon	130618..130620(+)		WP_011837496.1	ABC transporter ATP-binding protein	98.7	81.7	56.6
MGA_516	LOCUS_05090	sequence2:157373..158068(+)	internal_stop_codon	158066..158068(+),157319..157321(+)		WP_001093389.1	S8 family serine peptidase	99.1	14.6	54.3
MGA_517	LOCUS_05100	sequence2:158120..158746(+)	internal_stop_codon	158744..158746(+),158066..158068(+)		WP_011837426.1	S8 family serine peptidase	100.0	13.8	58.2
MGA_518	LOCUS_05110	sequence2:158807..159412(+)	internal_stop_codon	159410..159412(+),158744..158746(+),159497..159499(+),159629..159631(+)		WP_001093389.1	S8 family serine peptidase	94.5	12.7	48.7
MGA_519	LOCUS_05120	sequence2:159740..159988(+)	frameshift,internal_stop_codon	159497..159499(+),159629..159631(+)	159937	WP_001093389.1	S8 family serine peptidase	78.0	4.0	39.1
MGA_520	LOCUS_05130	sequence2:159964..160686(+)	frameshift		159937,160594	WP_001093389.1	S8 family serine peptidase	86.2	13.4	36.7
MGA_521	LOCUS_05140	sequence2:160686..161300(+)	frameshift		160617	WP_011836870.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	49.5	3.3	36.6
MGA_542	LOCUS_05350	sequence2:184220..184936(+)	frameshift		184915,184963	WP_002273870.1	type I pullulanase	98.3	30.4	58.1
MGA_543	LOCUS_05360	sequence2:184890..186407(+)	frameshift		186400,184915,184966,186382	WP_002273870.1	type I pullulanase	91.9	60.2	70.5
MGA_548	LOCUS_05410	sequence2:192353..193084(+)	frameshift,internal_stop_codon	192241..192243(+),193118..193120(+)	193003,192309,193063	WP_002262947.1	glycogen/starch/alpha-glucan phosphorylase	90.9	27.7	81.0
MGA_549	LOCUS_05420	sequence2:193128..193631(+)	frameshift,internal_stop_codon	193631..193633(+),193901..193903(+),193118..193120(+)	193006,193063	WP_002262947.1	glycogen/starch/alpha-glucan phosphorylase	99.4	20.8	84.3
MGA_550	LOCUS_05430	sequence2:193692..193901(+)	internal_stop_codon	193899..193901(+),193629..193631(+)		WP_002262947.1	glycogen/starch/alpha-glucan phosphorylase	98.6	8.5	73.5
MGA_551	LOCUS_05440	sequence2:194004..194633(+)	internal_stop_codon	193899..193901(+)		WP_002262947.1	glycogen/starch/alpha-glucan phosphorylase	99.5	26.1	84.6
MGA_603	LOCUS_05960	sequence2:251764..252210(+)	partial			WP_012583010.1	MarR family transcriptional regulator	70.9	71.7	32.4
MGA_609	LOCUS_06020	sequence2:258528..259598(+)	partial			WP_000257565.1	dihydrolipoamide acetyltransferase	95.2	72.7	65.1
MGA_611	LOCUS_06040	sequence2:261445..261876(-)	frameshift,internal_stop_codon	262043..262045(-)	261895	WP_010969981.1	DMT family transporter	88.8	45.2	32.3
MGA_616	LOCUS_06090	sequence2:266951..267586(+)	frameshift		267532	WP_011101955.1	DUF3737 family protein	92.9	68.1	55.6
MGA_617	LOCUS_06100	sequence2:267583..267798(+)	frameshift		267532	WP_011101955.1	DUF3737 family protein	94.4	23.3	52.2
MGA_618	LOCUS_06110	sequence2:267802..268791(+)	internal_stop_codon	268789..268791(+)		WP_011101954.1	pyridoxal phosphate-dependent aminotransferase	99.1	83.6	50.9
MGA_623	LOCUS_06160	sequence2:270655..271452(+)	partial			WP_011109290.1	MATE family efflux transporter	64.5	37.2	26.7
MGA_638	LOCUS_06310	sequence2:284766..285191(+)	frameshift,internal_stop_codon	284740..284742(+)	284769	WP_011202637.1	carboxymuconolactone decarboxylase family protein	97.9	50.0	60.1
MGA_644	LOCUS_06370	sequence2:288831..289052(+)	frameshift		288844	WP_002367385.1	potassium channel family protein	84.9	48.8	61.3
MGA_663	LOCUS_06560	sequence2:308613..309155(+)	partial			WP_000064987.1	LCP family protein	99.4	36.9	50.8
MGA_666	LOCUS_06590	sequence2:311041..311751(-)	partial			WP_150880979.1	ISL3 family transposase	99.6	57.8	72.0
MGA_667	LOCUS_06600	sequence2:311741..312058(-)	partial			WP_154650207.1	ISL3 family transposase	95.2	42.7	61.0
MGA_678	LOCUS_06710	sequence2:322338..323306(+)	partial			WP_003243644.1	glycosyltransferase	76.4	73.0	31.7
MGA_681	LOCUS_06740	sequence2:325601..326665(+)	partial			WP_011475868.1	sugar transferase	70.1	71.9	40.6
MGA_685	LOCUS_06780	sequence2:329437..330033(+)	partial			WP_011475860.1	acyltransferase family protein	84.3	47.9	26.4
MGA_687	LOCUS_06800	sequence2:332892..333755(-)	partial			WP_012775391.1	class C sortase	73.9	78.8	33.9
MGA_689	LOCUS_06820	sequence2:334582..335418(-)	partial			WP_000850398.1	class C sortase	78.1	74.1	58.1
MGA_694	LOCUS_06870	sequence2:343808..343999(+)	partial			WP_000020412.1	hypothetical protein	100.0	66.3	61.9
MGA_745	LOCUS_07380	sequence2:396741..397529(-)	frameshift		397494	WP_002262247.1	ABC transporter permease	95.4	47.4	54.0
MGA_746	LOCUS_07390	sequence2:397477..397941(-)	frameshift		397494	WP_002262247.1	ABC transporter permease	97.4	28.7	44.0
MGA_763	LOCUS_07560	sequence2:414761..415174(-)	partial			WP_001056394.1	TVP38/TMEM64 family protein	95.6	64.0	41.2
MGA_770	LOCUS_07630	sequence2:421554..422954(+)	partial			WP_093953830.1	esterase	35.2	18.4	29.3
MGA_773	LOCUS_07660	sequence2:424124..424957(+)	partial			WP_011861372.1	4Fe-4S binding protein	63.2	67.9	33.3
MGA_779	LOCUS_07720	sequence2:429907..430263(+)	frameshift		429829	WP_005807782.1	NUDIX domain-containing protein	83.1	57.8	36.2
MGA_781	LOCUS_07740	sequence2:430785..431051(-)	partial			WP_109289924.1	IS3 family transposase	81.8	16.0	84.7
MGA_784	LOCUS_07770	sequence2:432291..432602(+)	partial			WP_002911924.1	Rgg/GadR/MutR family transcriptional regulator	79.6	28.0	54.9
MGA_786	LOCUS_07790	sequence2:432806..433432(+)	frameshift		433417,433420,433414	WP_002352268.1	glucosyltransferase GtfB	99.0	14.1	43.8
MGA_788	LOCUS_07810	sequence2:433761..434207(+)	frameshift		434192	WP_003393633.1	CPBP family intramembrane metalloprotease	62.2	55.1	46.7
MGA_790	LOCUS_07830	sequence2:436028..436318(+)	frameshift,internal_stop_codon	436019..436021(+),436526..436528(+)	436279	WP_000453282.1	dihydroxyacetone kinase subunit DhaL	86.5	42.7	54.2
MGA_791	LOCUS_07840	sequence2:436321..436527(+)	frameshift,internal_stop_codon	436526..436528(+)	436282	WP_012027842.1	dihydroxyacetone kinase subunit DhaL	100.0	35.6	50.0
MGA_799	LOCUS_07920	sequence2:440313..440561(+)	frameshift,internal_stop_codon	440559..440561(+),440595..440597(+)	440311	WP_010989484.1	AbiH family protein	91.5	24.4	38.7
MGA_806	LOCUS_07990	sequence2:449952..450440(+)	partial			WP_011922396.1	DUF3307 domain-containing protein	99.4	67.5	57.8
MGA_820	LOCUS_08130	sequence2:463182..463685(-)	frameshift,internal_stop_codon	463182..463184(-)	463707	WP_010922318.1	DUF3307 domain-containing protein	99.4	69.3	60.8
MGA_821	LOCUS_08140	sequence2:463678..463890(-)	frameshift		463707	WP_010922318.1	DUF3307 domain-containing protein	84.3	24.8	62.7
MGA_822	LOCUS_08150	sequence2:463905..464336(-)	frameshift,internal_stop_codon	463904..463906(-)	464491	WP_002989760.1	SatD family protein	96.5	62.4	60.1
MGA_829	LOCUS_08220	sequence2:471028..471246(-)	frameshift		471029,471245	WP_003568093.1	hypothetical protein	98.6	65.7	70.4
MGA_856	LOCUS_08490	sequence2:501483..501845(-)	frameshift		502117	WP_000453500.1	IS110 family transposase	90.0	42.7	79.6
MGA_857	LOCUS_08500	sequence2:501802..502143(-)	partial			WP_000453500.1	IS110 family transposase	92.0	41.1	94.2
MGA_867	LOCUS_08600	sequence2:512495..513301(+)	frameshift,internal_stop_codon	513300..513302(+)	512446,512311	WP_126417900.1	ISL3 family transposase	100.0	65.7	73.9
MGA_882	LOCUS_08750	sequence2:527979..528419(+)	partial			WP_109289924.1	IS3 family transposase	88.4	28.7	70.5
MGA_883	LOCUS_08760	sequence2:528358..529131(+)	partial			WP_128834060.1	IS3-like element ISSmu1 family transposase	100.0	57.2	75.5
MGA_884	LOCUS_08770	sequence2:529393..529716(+)	internal_stop_codon	529858..529860(+),529714..529716(+)		WP_002263494.1	ISL3-like element ISSmu2 family transposase	100.0	25.7	61.7
MGA_886	LOCUS_08790	sequence2:532522..533100(-)	frameshift,internal_stop_codon	533100..533102(-),533187..533189(-)	533141	WP_000625941.1	alanine racemase	100.0	59.8	58.0
MGA_887	LOCUS_08800	sequence2:533187..533429(-)	frameshift,internal_stop_codon	533100..533102(-),533187..533189(-)	533448,533141	WP_000625941.1	alanine racemase	95.0	20.8	61.8
MGA_888	LOCUS_08810	sequence2:533422..533541(-)	frameshift,internal_stop_codon	533187..533189(-)	533448,533141	WP_000625941.1	alanine racemase	92.3	9.8	77.8
MGA_890	LOCUS_08830	sequence2:534171..534713(+)	frameshift		534647	WP_012544973.1	IS110 family transposase	83.3	36.5	34.9
MGA_891	LOCUS_08840	sequence2:534614..535117(+)	frameshift		535100,534638	WP_011015895.1	IS110-like element ISFnu4 family transposase	92.2	41.2	39.8
MGA_892	LOCUS_08850	sequence2:535111..535329(+)	frameshift		535099	WP_011015895.1	IS110-like element ISFnu4 family transposase	98.6	18.2	48.6
MGA_893	LOCUS_08860	sequence2:535532..535885(+)	partial			WP_109289924.1	IS3 family transposase	74.4	19.4	69.0
MGA_894	LOCUS_08870	sequence2:535848..536297(+)	frameshift		536282	WP_120719018.1	IS3 family transposase	98.0	32.5	78.8
MGA_895	LOCUS_08880	sequence2:536306..536455(+)	frameshift		536282	WP_115283723.1	IS3 family transposase	95.9	10.4	95.7
MGA_896	LOCUS_08890	sequence2:536593..537399(+)	frameshift,internal_stop_codon	537397..537399(+)	537552	WP_126417900.1	ISL3 family transposase	96.3	63.2	70.2
MGA_910	LOCUS_09030	sequence2:550902..551138(-)	partial			WP_000910184.1	thiaminase II	97.4	33.6	38.2
MGA_911	LOCUS_09040	sequence2:551143..551352(-)	partial			WP_000910184.1	thiaminase II	97.1	29.6	46.3
MGA_912	LOCUS_09050	sequence2:551437..551739(-)	frameshift,internal_stop_codon	551931..551933(-),551751..551753(-),551436..551438(-)	551972	WP_011922263.1	HAD hydrolase-like protein	100.0	46.5	36.0
MGA_915	LOCUS_09080	sequence2:552703..552984(-)	frameshift		553040	WP_000181409.1	energy coupling factor transporter S component ThiW	96.8	47.9	54.4
MGA_916	LOCUS_09090	sequence2:553038..553277(-)	frameshift		553040	WP_000181409.1	energy coupling factor transporter S component ThiW	100.0	42.0	64.6
MGA_923	LOCUS_09160	sequence2:560892..561221(-)	internal_stop_codon	561234..561236(-)		WP_012774938.1	Cof-type HAD-IIB family hydrolase	95.4	38.2	44.8
MGA_924	LOCUS_09170	sequence2:561234..561713(-)	internal_stop_codon	561234..561236(-)		WP_011836481.1	Cof-type HAD-IIB family hydrolase	73.0	42.0	42.2
MGA_925	LOCUS_09180	sequence2:561956..562267(+)	frameshift		562258	WP_154650207.1	ISL3 family transposase	97.1	42.7	59.0
MGA_926	LOCUS_09190	sequence2:562308..563210(+)	frameshift		562258	WP_150880979.1	ISL3 family transposase	99.7	73.5	73.0
MGA_927	LOCUS_09200	sequence2:563283..566642(-)	partial			WP_011836393.1	GBS Bsp-like repeat-containing protein	63.9	78.6	32.8
MGA_928	LOCUS_09210	sequence2:566971..567666(-)	internal_stop_codon	566839..566841(-),567823..567825(-),566971..566973(-)		WP_003546652.1	family 1 glycosylhydrolase	100.0	47.3	66.8
MGA_929	LOCUS_09220	sequence2:567823..568287(-)	internal_stop_codon	567823..567825(-)		WP_003546652.1	family 1 glycosylhydrolase	98.1	30.3	63.6
MGA_931	LOCUS_09240	sequence2:569037..569243(-)	partial			WP_005168914.1	Cof-type HAD-IIB family hydrolase	91.2	23.0	54.8
MGA_932	LOCUS_09250	sequence2:569349..569861(-)	internal_stop_codon	569349..569351(-)		WP_012774938.1	Cof-type HAD-IIB family hydrolase	100.0	62.9	33.5
MGA_947	LOCUS_09400	sequence2:581929..583092(-)	frameshift		583328	WP_002262843.1	beta-glucoside-specific PTS transporter subunit IIABC	99.7	59.5	57.3
MGA_948	LOCUS_09410	sequence2:583245..583817(-)	frameshift		583328	WP_002262843.1	beta-glucoside-specific PTS transporter subunit IIABC	85.8	25.3	72.6
MGA_949	LOCUS_09420	sequence2:584289..584846(-)	frameshift,internal_stop_codon	584289..584291(-)	584853	WP_002264303.1	PRD domain-containing protein	98.9	65.4	65.6
MGA_950	LOCUS_09430	sequence2:584824..584994(-)	frameshift		584853	WP_002264303.1	PRD domain-containing protein	80.4	16.1	73.3
MGA_966	LOCUS_09590	sequence2:600139..600759(+)	frameshift		600693	WP_126417900.1	ISL3 family transposase	85.4	43.1	75.6
MGA_967	LOCUS_09600	sequence2:600768..601391(+)	frameshift		600693	WP_150880979.1	ISL3 family transposase	100.0	50.7	77.3
MGA_1021	LOCUS_10140	sequence2:652464..652994(-)	partial			WP_002990206.1	glycoside hydrolase family 73 protein	85.2	63.8	66.0
MGA_1024	LOCUS_10170	sequence2:655605..656342(-)	internal_stop_codon	656442..656444(-)		WP_012803888.1	aldo/keto reductase	100.0	72.6	61.1
MGA_1025	LOCUS_10180	sequence2:656442..656591(-)	internal_stop_codon	656442..656444(-)		WP_011267240.1	aldo/keto reductase	93.9	13.6	63.0
MGA_1069	LOCUS_10620	sequence2:702074..702433(-)	partial			WP_000124839.1	50S ribosomal protein L20	74.8	74.8	96.6
MGA_1077	LOCUS_10700	sequence2:706694..707281(-)	partial			WP_002263334.1	DUF6287 domain-containing protein	64.6	65.1	54.3
MGA_1081	LOCUS_10740	sequence2:713819..714403(+)	frameshift		714322	WP_150880979.1	ISL3 family transposase	93.3	44.4	60.2
MGA_1082	LOCUS_10750	sequence2:714405..714737(+)	frameshift		714322	WP_150880979.1	ISL3 family transposase	100.0	27.0	65.5
MGA_1094	LOCUS_10870	sequence2:728758..729795(-)	partial			WP_002261979.1	glycosyltransferase	77.4	57.2	57.7
MGA_1103	LOCUS_10960	sequence2:737910..738086(-)	partial			WP_000048058.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1119	LOCUS_11120	sequence2:758180..758680(+)	partial			WP_015943945.1	ferritin family protein	98.2	41.6	64.4
MGA_1121	LOCUS_11140	sequence2:759463..759795(+)	frameshift,internal_stop_codon	759898..759900(+),759421..759423(+)	759789	WP_002261956.1	ATP-binding cassette domain-containing protein	98.2	21.6	45.4
MGA_1122	LOCUS_11150	sequence2:759945..760121(+)	frameshift,internal_stop_codon	759898..759900(+)	759792,760113	WP_002261956.1	ATP-binding cassette domain-containing protein	93.1	10.8	51.9
MGA_1123	LOCUS_11160	sequence2:760102..760416(+)	frameshift,internal_stop_codon	759897..759899(+),760414..760416(+)	760112	WP_002261956.1	ATP-binding cassette domain-containing protein	96.2	20.0	56.0
MGA_1130	LOCUS_11230	sequence2:767125..767343(-)	internal_stop_codon	767401..767403(-)		WP_120719025.1	IS3 family transposase	98.6	15.8	91.5
MGA_1131	LOCUS_11240	sequence2:767401..767937(-)	internal_stop_codon	767401..767403(-)		WP_120719018.1	IS3 family transposase	100.0	39.6	71.9
MGA_1145	LOCUS_11380	sequence2:776484..776720(-)	frameshift		776754	WP_000914581.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	100.0	14.4	61.5
MGA_1152	LOCUS_11450	sequence2:784582..785148(+)	partial			WP_011674335.1	Ltp family lipoprotein	75.5	65.0	60.1
MGA_1174	LOCUS_11670	sequence2:808824..809324(-)	partial			WP_199567761.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	75.3	5.3	31.5
MGA_1175	LOCUS_11680	sequence2:809444..812023(-)	internal_stop_codon	812249..812251(-)		WP_164925492.1	pullulanase	99.2	40.6	65.7
MGA_1176	LOCUS_11690	sequence2:812249..813010(-)	internal_stop_codon	812249..812251(-)		WP_164925492.1	pullulanase	100.0	8.8	31.6
MGA_1204	LOCUS_11970	sequence2:838170..838463(-)	partial			WP_000022160.1	site-specific integrase	95.9	24.5	62.8
MGA_1205	LOCUS_11980	sequence2:838744..839088(+)	frameshift		839061	WP_000122833.1	MobV family relaxase	81.6	22.2	78.5
MGA_1206	LOCUS_11990	sequence2:839081..839419(+)	frameshift		839371,839061	WP_000122833.1	MobV family relaxase	87.5	23.4	32.7
MGA_1207	LOCUS_12000	sequence2:839370..839735(+)	frameshift		839380	WP_000122833.1	MobV family relaxase	96.7	28.0	57.3
MGA_1208	LOCUS_12010	sequence2:840261..840449(+)	partial			WP_000130119.1	hypothetical protein	100.0	39.7	71.0
MGA_1211	LOCUS_12040	sequence2:841660..841878(-)	frameshift,internal_stop_codon	841935..841937(-)	842003	WP_120719025.1	IS3 family transposase	98.6	15.8	87.3
MGA_1212	LOCUS_12050	sequence2:841995..842471(-)	frameshift,internal_stop_codon	841935..841937(-)	842003	WP_128834060.1	IS3-like element ISSmu1 family transposase	98.7	34.7	73.1
MGA_1221	LOCUS_12140	sequence2:851165..852964(+)	partial			WP_002352208.1	2-hydroxyacyl-CoA dehydratase	96.5	40.3	88.4
MGA_1222	LOCUS_12150	sequence2:852957..855545(+)	partial			WP_002352208.1	2-hydroxyacyl-CoA dehydratase	99.2	59.8	86.5
MGA_1254	LOCUS_12470	sequence2:891038..891703(+)	frameshift		891048	WP_011074540.1	peptidoglycan recognition family protein	100.0	67.3	57.5
MGA_1260	LOCUS_12530	sequence2:897851..898753(-)	frameshift		898802	WP_150880979.1	ISL3 family transposase	99.7	73.5	72.0
MGA_1261	LOCUS_12540	sequence2:898794..899105(-)	frameshift		898802	WP_154650207.1	ISL3 family transposase	97.1	42.7	60.0
MGA_1299	LOCUS_12920	sequence2:932669..933244(+)	internal_stop_codon	933242..933244(+)		WP_002262804.1	oleate hydratase	100.0	32.4	81.2
MGA_1300	LOCUS_12930	sequence2:933254..933946(+)	internal_stop_codon	933242..933244(+),933944..933946(+)		WP_002262804.1	oleate hydratase	100.0	39.0	73.9
MGA_1301	LOCUS_12940	sequence2:933995..934468(+)	frameshift,internal_stop_codon	933944..933946(+)	934378	WP_002262804.1	oleate hydratase	83.4	22.2	84.0
MGA_1302	LOCUS_12950	sequence2:934504..935526(-)	partial			WP_010964130.1	pectate lyase	98.2	71.7	34.2
MGA_1322	LOCUS_13150	sequence2:955011..955247(-)	partial			WP_002985700.1	preprotein translocase subunit SecG	74.4	74.4	81.0
MGA_1330	LOCUS_13230	sequence2:960953..961288(-)	frameshift,internal_stop_codon	960953..960955(-),961321..961323(-)	961473	WP_003234692.1	alpha-amylase	61.3	10.5	42.0
MGA_1331	LOCUS_13240	sequence2:961417..962421(-)	frameshift,internal_stop_codon	962572..962574(-),961321..961323(-),962704..962706(-)	961473	WP_003234692.1	alpha-amylase	93.7	48.0	49.5
MGA_1332	LOCUS_13250	sequence2:962704..962952(-)	internal_stop_codon	962572..962574(-),962704..962706(-)		WP_003234692.1	alpha-amylase	98.8	12.3	50.6
MGA_1395	LOCUS_13880	sequence2:1019331..1020284(-)	partial			WP_010706863.1	DUF6287 domain-containing protein	39.1	48.5	36.8
MGA_1396	LOCUS_13890	sequence2:1020303..1021481(-)	partial			WP_011837294.1	DUF6287 domain-containing protein	31.4	27.1	34.1
MGA_1401	LOCUS_13940	sequence2:1025700..1026974(-)	internal_stop_codon	1026993..1026995(-)		WP_003643065.1	glycoside-pentoside-hexuronide (GPH):cation symporter	99.5	65.8	52.2
MGA_1402	LOCUS_13950	sequence2:1026993..1027616(-)	internal_stop_codon	1026993..1026995(-)		WP_003643065.1	glycoside-pentoside-hexuronide (GPH):cation symporter	89.9	28.5	69.4
MGA_1406	LOCUS_13990	sequence2:1030270..1030965(-)	frameshift		1031009	WP_003051793.1	site-specific integrase	97.8	60.8	35.6
MGA_1407	LOCUS_14000	sequence2:1030917..1031399(-)	frameshift		1030997	WP_010905403.1	site-specific integrase	72.5	30.6	30.8
MGA_1409	LOCUS_14020	sequence2:1031845..1032156(+)	internal_stop_codon	1032154..1032156(+)		WP_154650207.1	ISL3 family transposase	97.1	42.7	59.0
MGA_1410	LOCUS_14030	sequence2:1032196..1033002(+)	frameshift,internal_stop_codon	1033001..1033003(+)	1032147,1032172	WP_126417900.1	ISL3 family transposase	100.0	65.7	73.1
MGA_1435	LOCUS_14280	sequence2:1057429..1057869(+)	internal_stop_codon	1057973..1057975(+)		WP_109289924.1	IS3 family transposase	88.4	28.7	68.2
MGA_1436	LOCUS_14290	sequence2:1057808..1057975(+)	internal_stop_codon	1057973..1057975(+)		WP_120719018.1	IS3 family transposase	100.0	12.2	63.6
MGA_1437	LOCUS_14300	sequence2:1058012..1058620(+)	internal_stop_codon	1057973..1057975(+)		WP_002263573.1	IS3 family transposase	99.5	72.3	81.6
MGA_1470	LOCUS_14630	sequence2:1094152..1095021(-)	partial			WP_009966754.1	GIY-YIG nuclease family protein	93.1	66.8	31.4
MGA_1477	LOCUS_14700	sequence2:1101754..1102140(-)	frameshift		1102151	WP_000128173.1	cysteine hydrolase family protein	98.4	72.8	42.9
MGA_1501	LOCUS_14940	sequence2:1121944..1122189(+)	frameshift,internal_stop_codon	1121872..1121874(+)	1122277	WP_000453500.1	IS110 family transposase	100.0	32.0	91.4
MGA_1502	LOCUS_14950	sequence2:1122367..1122507(+)	frameshift		1122277	WP_000453500.1	IS110 family transposase	100.0	18.2	76.1
MGA_1520	LOCUS_15130	sequence2:1141811..1142197(-)	frameshift,internal_stop_codon	1141748..1141750(-),1142225..1142227(-)	1141852	WP_002265226.1	MATE family efflux transporter	89.8	27.0	56.5
MGA_1521	LOCUS_15140	sequence2:1142225..1142965(-)	internal_stop_codon	1142225..1142227(-)		WP_002265226.1	MATE family efflux transporter	93.5	54.0	60.9
MGA_1534	LOCUS_15270	sequence2:1153582..1158507(-)	partial			WP_010989452.1	class 1 internalin InlF	8.8	17.8	27.0
MGA_1543	LOCUS_15360	sequence2:1167504..1168394(-)	partial			WP_011016071.1	carboxylating nicotinate-nucleotide diphosphorylase	66.6	68.9	60.9
MGA_1572	LOCUS_15650	sequence2:1197260..1197580(-)	frameshift,internal_stop_codon	1197691..1197693(-),1197688..1197690(-),1197676..1197678(-)	1197576	WP_002264906.1	CHAP domain-containing protein	96.2	47.9	63.7
MGA_1573	LOCUS_15660	sequence2:1197691..1197948(-)	frameshift,internal_stop_codon	1197691..1197693(-),1197688..1197690(-),1197676..1197678(-)	1197579	WP_002264906.1	CHAP domain-containing protein	85.9	33.2	45.2
MGA_1599	LOCUS_15920	sequence2:1228892..1229488(-)	partial			WP_000919740.1	D-alanyl-lipoteichoic acid biosynthesis protein DltD	98.0	46.2	61.3
MGA_1600	LOCUS_15930	sequence2:1229524..1230807(+)	partial			WP_012048273.1	glucoamylase family protein	73.5	10.2	20.2
MGA_1601	LOCUS_15940	sequence2:1231424..1233238(+)	frameshift		1231274	WP_195978718.1	N,N'-diacetylchitobiose phosphorylase	100.0	75.2	75.0
MGA_1630	LOCUS_16230	sequence2:1258367..1258861(-)	partial			WP_012027929.1	hypothetical protein	70.1	74.2	62.6
MGA_1662	LOCUS_16550	sequence2:1301556..1301882(+)	frameshift		1301804	WP_002273717.1	trehalose operon repressor	76.9	35.0	66.3
MGA_1663	LOCUS_16560	sequence2:1302002..1302268(+)	frameshift		1301804	WP_002273717.1	trehalose operon repressor	96.6	35.9	78.8
MGA_1665	LOCUS_16580	sequence2:1303514..1303990(-)	partial			WP_011837257.1	isopeptide-forming domain-containing fimbrial protein	94.3	30.9	43.8
MGA_1668	LOCUS_16610	sequence2:1305610..1305840(-)	frameshift,internal_stop_codon	1305609..1305611(-),1305579..1305581(-)	1305899	WP_014917214.1	signal peptidase I	100.0	37.0	59.2
MGA_1701	LOCUS_16940	sequence2:1336790..1337119(+)	partial			WP_011837676.1	site-specific integrase	100.0	25.9	92.7
MGA_1708	LOCUS_17010	sequence2:1341060..1341278(-)	internal_stop_codon	1341342..1341344(-)		WP_115283723.1	IS3 family transposase	97.2	15.6	90.0
MGA_1709	LOCUS_17020	sequence2:1341342..1341917(-)	frameshift,internal_stop_codon	1341340..1341342(-),1342114..1342116(-)	1341948,1342101	WP_115283723.1	IS3 family transposase	99.5	42.2	87.4
MGA_1710	LOCUS_17030	sequence2:1341875..1342063(-)	frameshift,internal_stop_codon	1342114..1342116(-)	1342101	WP_081026662.1	IS3 family transposase	90.3	23.9	55.4
MGA_1711	LOCUS_17040	sequence2:1342114..1342287(-)	frameshift,internal_stop_codon	1342348..1342350(-),1342114..1342116(-)	1341948,1342101	WP_115283723.1	IS3 family transposase	100.0	12.7	84.2
MGA_1725	LOCUS_17180	sequence2:1357196..1357765(-)	partial			WP_010922794.1	transglycosylase SLT domain-containing protein	60.3	55.9	62.3
MGA_1752	LOCUS_17440	sequence2:1386224..1386556(+)	partial			WP_000577652.1	helix-turn-helix transcriptional regulator	100.0	70.5	36.9
MGA_1763	LOCUS_17550	sequence2:1398211..1398630(-)	frameshift,internal_stop_codon	1398209..1398211(-)	1398778,1398685	WP_205010637.1	IS30 family transposase	100.0	43.8	71.9
MGA_1764	LOCUS_17560	sequence2:1398776..1399039(-)	frameshift		1398781,1398685	WP_205010637.1	IS30 family transposase	98.9	27.1	75.6
MGA_1765	LOCUS_17570	sequence3:80..535(-)	frameshift		579	WP_002296502.1	site-specific integrase	92.7	37.0	32.9
MGA_1766	LOCUS_17580	sequence3:487..969(-)	frameshift		567	WP_010905403.1	site-specific integrase	72.5	30.6	30.8
MGA_1768	LOCUS_17600	sequence3:1415..1726(+)	internal_stop_codon	1724..1726(+)		WP_154650207.1	ISL3 family transposase	97.1	42.7	59.0
MGA_1769	LOCUS_17610	sequence3:1766..2572(+)	frameshift,internal_stop_codon	2571..2573(+)	1717,1742	WP_126417900.1	ISL3 family transposase	100.0	65.7	73.1
MGA_1770	LOCUS_17620	sequence3:2722..>6144(-)	partial			WP_011837563.1	Cna B-type domain-containing protein	93.4	69.5	42.2
MGA_1771	LOCUS_17630	sequence4:70..627(-)	frameshift		168,108,604	WP_000427485.1	amino acid permease	96.2	38.9	75.3
MGA_1772	LOCUS_17640	sequence4:602..1381(-)	frameshift		607	WP_000427485.1	amino acid permease	100.0	56.6	83.4
MGA_1776	LOCUS_17680	sequence4:3725..4132(-)	frameshift		3781	WP_000166043.1	dihydrofolate reductase	87.4	72.0	78.0
MGA_1781	LOCUS_17730	sequence4:9101..9355(+)	frameshift		9313	WP_002264322.1	DUF1836 domain-containing protein	89.3	48.1	60.0
MGA_1782	LOCUS_17740	sequence4:9363..9545(+)	frameshift		9313	WP_001039194.1	DUF1836 domain-containing protein	95.0	38.3	52.6
MGA_1790	LOCUS_17800	sequence5:7532..7816(+)	frameshift		7798	WP_000586895.1	GNAT family N-acetyltransferase	84.0	48.5	60.8
MGA_1791	LOCUS_17810	sequence5:7866..8096(+)	frameshift		7801	WP_003699994.1	GNAT family N-acetyltransferase	80.3	30.8	62.3
