{
    "type": "genome",
    "identifier": "GCF_900461615.1",
    "organism": "Leuconostoc mesenteroides",
    "title": "Leuconostoc mesenteroides",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "SC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_900461615.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA4521462",
        "wgs_master": "UGPC00000000.1",
        "refseq_category": "na",
        "taxid": "1245",
        "species_taxid": "1245",
        "organism_name": "Leuconostoc mesenteroides",
        "infraspecific_name": "strain=NCTC12954",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2018/08/01",
        "asm_name": "51765_D01",
        "asm_submitter": "SC",
        "gbrs_paired_asm": "GCA_900461615.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/461/615/GCF_900461615.1_51765_D01",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2081645",
        "genome_size_ungapped": "2081645",
        "gc_percent": "37.500000",
        "replicon_count": "0",
        "scaffold_count": "2",
        "contig_count": "2",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_900461615.1-RS_2024_07_31",
        "annotation_date": "2024-07-31",
        "total_gene_count": "2106",
        "protein_coding_gene_count": "2000",
        "non_coding_gene_count": "85",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2018-08-01",
    "dateModified": "2018-08-01",
    "datePublished": "2018-08-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Leuconostoc mesenteroides"
        ],
        "sample_taxid": [
            "1245"
        ],
        "sample_host_organism": [
            "environmental"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.586 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2081645",
        "Number of Sequences": "2",
        "Longest Sequences (bp)": "2038378",
        "N50 (bp)": "2038378",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "37.7",
        "Number of CDSs": "2031",
        "Average Protein Length": "301.6",
        "Coding Ratio (%)": "88.3",
        "Number of rRNAs": "12",
        "Number of tRNAs": "71",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Leuconostoc mesenteroides",
                "strain": "strain=NCTC12954",
                "accession": "GCA_900461615.1",
                "taxid": 1245,
                "species_taxid": 1245,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 688,
                "total_fragments": 693,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Leuconostoc mesenteroides subsp. mesenteroides",
                "strain": "strain=ATCC 8293",
                "accession": "GCA_000014445.1",
                "taxid": 33967,
                "species_taxid": 1245,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.9983,
                "matched_fragments": 688,
                "total_fragments": 693,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Leuconostoc mesenteroides subsp. mesenteroides",
                "strain": "strain=NBRC 100496",
                "accession": "GCA_007990165.1",
                "taxid": 33967,
                "species_taxid": 1245,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.9411,
                "matched_fragments": 663,
                "total_fragments": 693,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Leuconostoc mesenteroides subsp. dextranicum",
                "strain": "strain=NBRC 100495",
                "accession": "GCA_007990145.1",
                "taxid": 33966,
                "species_taxid": 1245,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.8947,
                "matched_fragments": 522,
                "total_fragments": 693,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Leuconostoc mesenteroides subsp. jonggajibkimchii",
                "strain": "strain=DRC1506",
                "accession": "GCA_001886915.1",
                "taxid": 2026657,
                "species_taxid": 1245,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.8145,
                "matched_fragments": 601,
                "total_fragments": 693,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Leuconostoc mesenteroides subsp. cremoris",
                "strain": "strain=ATCC 19254",
                "accession": "GCA_000160595.1",
                "taxid": 33965,
                "species_taxid": 1245,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.211,
                "matched_fragments": 481,
                "total_fragments": 693,
                "ani_threshold": 95,
                "status": "conclusive"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCF_000014445.1",
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                "matched_fragments": 688,
                "total_fragments": 693,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.82",
                "min_intra_species_ani": "97.34",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 89,
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            },
            {
                "accession": "GCF_001891125.1",
                "gtdb_species": "s__Leuconostoc suionicum",
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                "matched_fragments": 600,
                "total_fragments": 693,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.16",
                "min_intra_species_ani": "97.05",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCF_009676745.1",
                "gtdb_species": "s__Leuconostoc mesenteroides_B",
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                "matched_fragments": 541,
                "total_fragments": 693,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
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                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_008107645.1",
                "gtdb_species": "s__Leuconostoc litchii",
                "ani": 82.3668,
                "matched_fragments": 410,
                "total_fragments": 693,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000092505.1",
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                "matched_fragments": 197,
                "total_fragments": 693,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.55",
                "min_intra_species_ani": "99.53",
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                "num_clustered_genomes": 3,
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            },
            {
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            },
            {
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            },
            {
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                "mean_intra_species_ani": "99.31",
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                "num_clustered_genomes": 17,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
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        "bacillus_cell_shape": 0.0,
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    "_genome_taxon": [
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        "mesenteroides"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}