# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_6	LOCUS_00060	sequence1:5793..6020(-)	frameshift		5813	WP_011837728.1	YfhO family protein	92.0	8.0	75.4
MGA_41	LOCUS_00410	sequence1:44925..45257(-)	frameshift		45514	WP_001007202.1	GntR family transcriptional regulator	98.2	45.4	75.0
MGA_42	LOCUS_00420	sequence1:45494..45640(-)	frameshift		45514	WP_001007202.1	GntR family transcriptional regulator	87.5	17.6	90.5
MGA_164	LOCUS_01640	sequence1:178035..178169(+)	partial			WP_000831905.1	50S ribosomal protein L34	59.1	59.1	96.2
MGA_181	LOCUS_01810	sequence1:192838..193377(+)	partial			WP_011837558.1	hypothetical protein	69.8	80.5	41.3
MGA_195	LOCUS_01950	sequence1:215513..216079(+)	frameshift,internal_stop_codon	216077..216079(+)	216166	WP_184006649.1	IS1182 family transposase	100.0	39.2	72.9
MGA_196	LOCUS_01960	sequence1:216181..216963(+)	frameshift,internal_stop_codon	216077..216079(+)	216169	WP_076996129.1	IS1182 family transposase	100.0	53.5	70.1
MGA_206	LOCUS_02060	sequence1:223863..224171(+)	partial			WP_002263021.1	hypothetical protein	98.0	47.9	39.6
MGA_247	LOCUS_02470	sequence1:267328..267459(-)	partial			WP_000199548.1	NADP-specific glutamate dehydrogenase	100.0	9.6	88.4
MGA_252	LOCUS_02520	sequence1:271713..272399(+)	partial			WP_135783035.1	DUF4947 domain-containing protein	73.7	83.9	30.9
MGA_254	LOCUS_02540	sequence1:274047..274277(+)	partial			WP_011836473.1	beta-glucoside-specific PTS transporter subunit IIABC	92.1	10.9	98.6
MGA_272	LOCUS_02720	sequence1:291325..291564(+)	partial			WP_011837083.1	serine hydrolase domain-containing protein	75.9	10.1	75.0
MGA_289	LOCUS_02890	sequence1:310138..314385(+)	partial			WP_001093389.1	S8 family serine peptidase	80.3	73.0	36.2
MGA_290	LOCUS_02900	sequence1:314470..318954(+)	partial			WP_011837426.1	S8 family serine peptidase	74.3	73.2	37.4
MGA_313	LOCUS_03130	sequence1:342097..342756(-)	partial			WP_000823931.1	DNA/RNA non-specific endonuclease	23.3	13.6	62.7
MGA_332	LOCUS_03320	sequence1:361965..362780(-)	partial			WP_205010568.1	tyrosine-type recombinase/integrase	100.0	66.9	84.5
MGA_335	LOCUS_03350	sequence1:365969..366751(+)	partial			WP_000147505.1	DUF389 domain-containing protein	100.0	74.5	91.2
MGA_361	LOCUS_03610	sequence1:395071..395271(+)	frameshift		395014	WP_002920200.1	PadR family transcriptional regulator	100.0	61.7	86.4
MGA_373	LOCUS_03730	sequence1:409407..412508(+)	frameshift		412433	WP_011837491.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	97.8	51.0	78.3
MGA_374	LOCUS_03740	sequence1:412508..415237(+)	frameshift		412436	WP_011837491.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	100.0	47.7	97.5
MGA_379	LOCUS_03790	sequence1:419060..419683(+)	internal_stop_codon	419039..419041(+)		WP_011837485.1	CPBP family glutamic-type intramembrane protease	100.0	83.1	85.5
MGA_427	LOCUS_04270	sequence1:471463..471612(+)	partial			WP_001843884.1	helix-turn-helix transcriptional regulator	100.0	62.0	83.7
MGA_433	LOCUS_04330	sequence1:475210..475518(+)	partial			WP_024265752.1	putative quinol monooxygenase	96.1	72.5	36.7
MGA_510	LOCUS_05100	sequence1:556044..557255(+)	partial			WP_012027693.1	restriction endonuclease subunit S	51.6	52.9	36.4
MGA_511	LOCUS_05110	sequence1:557406..557804(+)	partial			WP_002239757.1	hypothetical protein	84.8	60.2	28.9
MGA_547	LOCUS_05470	sequence1:598088..598402(+)	partial			WP_002983650.1	DNA-directed RNA polymerase subunit omega	62.5	61.9	93.8
MGA_571	LOCUS_05700	sequence1:628144..628755(+)	partial			WP_002263334.1	DUF6287 domain-containing protein	66.0	72.8	29.6
MGA_572	LOCUS_05710	sequence1:628852..629397(+)	partial			WP_002901757.1	DUF6287 domain-containing protein	67.4	61.0	60.7
MGA_585	LOCUS_05840	sequence1:646016..646447(+)	partial			WP_000265622.1	competence type IV pilus minor pilin ComGG	72.7	73.0	47.1
MGA_631	LOCUS_06300	sequence1:688170..688577(+)	partial			WP_011836516.1	ABC transporter permease	100.0	25.2	85.9
MGA_643	LOCUS_06420	sequence1:701704..702807(+)	partial			WP_002356656.1	SPFH domain-containing protein	73.8	63.9	30.0
MGA_672	LOCUS_06710	sequence1:734084..735061(+)	partial			WP_003063994.1	hypothetical protein	65.5	70.4	31.4
MGA_677	LOCUS_06760	sequence1:738663..738842(+)	frameshift		738833,738830	WP_011836383.1	NUDIX hydrolase	94.9	37.3	87.5
MGA_678	LOCUS_06770	sequence1:738811..739113(+)	frameshift		738833,738830	WP_011836383.1	NUDIX hydrolase	92.0	61.3	85.9
MGA_721	LOCUS_07200	sequence1:787753..789333(+)	partial			WP_011837107.1	ATP-binding protein	54.0	52.5	51.0
MGA_817	LOCUS_08140	sequence1:898251..898853(-)	frameshift		898888	WP_000136861.1	PTS system mannose/fructose/sorbose family transporter subunit IID	100.0	66.0	84.5
MGA_818	LOCUS_08150	sequence1:898850..899164(-)	frameshift		898888	WP_000136861.1	PTS system mannose/fructose/sorbose family transporter subunit IID	88.5	30.4	93.5
MGA_846	LOCUS_08430	sequence1:925077..926621(+)	frameshift		926603	WP_011921815.1	PTS system trehalose-specific EIIBC component	97.5	75.8	80.7
MGA_847	LOCUS_08440	sequence1:926660..927085(+)	frameshift		926600	WP_011921815.1	PTS system trehalose-specific EIIBC component	98.6	20.9	71.2
MGA_850	LOCUS_08470	sequence1:931759..933843(+)	partial			WP_002382226.1	SpaA isopeptide-forming pilin-related protein	73.3	81.1	35.9
MGA_928	LOCUS_09250	sequence1:1021780..1021974(+)	frameshift,internal_stop_codon	1021646..1021648(+)	1021663	WP_120719250.1	hypothetical protein	93.8	43.8	56.7
MGA_929	LOCUS_09260	sequence1:1021986..1022189(+)	partial			WP_002900787.1	helix-turn-helix transcriptional regulator	100.0	62.0	83.6
MGA_967	LOCUS_09640	sequence1:1057135..1057401(+)	partial			WP_002899814.1	DUF421 domain-containing protein	62.5	26.2	70.9
MGA_970	LOCUS_09670	sequence1:1060682..1061218(+)	partial			WP_011837294.1	DUF6287 domain-containing protein	84.3	32.8	42.0
MGA_971	LOCUS_09680	sequence1:1061224..1061487(+)	partial			WP_011837294.1	DUF6287 domain-containing protein	92.0	19.0	65.0
MGA_1006	LOCUS_10030	sequence1:1089715..1090176(+)	partial			WP_000056125.1	T7SS effector LXG polymorphic toxin	93.5	27.0	31.7
MGA_1007	LOCUS_10040	sequence1:1090192..1090857(+)	partial			WP_001204631.1	PoNi-like cognate immunity protein	97.3	57.8	26.2
MGA_1104	LOCUS_11010	sequence1:1190043..1193216(+)	partial			WP_011476404.1	Xaa-Pro dipeptidyl-peptidase	61.1	76.8	29.4
MGA_1152	LOCUS_11490	sequence1:1242326..1242727(+)	partial			WP_000150277.1	ROK family protein	48.1	21.8	89.1
MGA_1156	LOCUS_11530	sequence1:1245192..1246955(+)	partial			WP_196792563.1	LPXTG cell wall anchor domain-containing protein	55.0	38.6	24.3
MGA_1175	LOCUS_11720	sequence1:1261333..1262157(+)	partial			WP_000048867.1	LPXTG cell wall anchor domain-containing protein	56.6	60.8	31.7
MGA_1200	LOCUS_11970	sequence1:1288794..1289513(+)	internal_stop_codon	1289511..1289513(+)		WP_011837152.1	phosphotransferase	100.0	81.8	88.3
MGA_1204	LOCUS_12010	sequence1:1292124..1292252(+)	partial			WP_000900005.1	ADP-ribosylglycohydrolase family protein	88.1	13.0	100.0
MGA_1206	LOCUS_12030	sequence1:1293015..1293251(+)	internal_stop_codon	1293249..1293251(+)		WP_000900020.1	ADP-ribosylglycohydrolase family protein	100.0	27.5	87.2
MGA_1207	LOCUS_12040	sequence1:1293303..1293869(+)	internal_stop_codon	1293249..1293251(+)		WP_000900020.1	ADP-ribosylglycohydrolase family protein	98.4	65.1	85.9
MGA_1209	LOCUS_12060	sequence1:1295753..1296616(-)	partial			WP_002985634.1	quorum-sensing system transcriptional regulator Rgg3	69.0	69.6	22.8
MGA_1241	LOCUS_12380	sequence1:1329585..1330232(+)	frameshift		1330214	WP_011459674.1	alpha/beta hydrolase	96.7	79.9	33.8
MGA_1273	LOCUS_12700	sequence1:1361711..1361887(+)	partial			WP_000048054.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1280	LOCUS_12770	sequence1:1368203..1368721(+)	partial			WP_011459566.1	TlpA disulfide reductase family protein	75.6	64.3	36.2
MGA_1311	LOCUS_13080	sequence1:1402755..1402913(+)	partial			WP_011836998.1	NUDIX hydrolase	73.1	27.5	71.1
MGA_1344	LOCUS_13410	sequence1:1431412..1431543(+)	frameshift		1431540	WP_011836975.1	PRD domain-containing protein	100.0	15.4	83.7
MGA_1345	LOCUS_13420	sequence1:1431578..1432231(+)	frameshift,internal_stop_codon	1432229..1432231(+)	1431540	WP_011836975.1	PRD domain-containing protein	99.5	77.5	71.4
MGA_1357	LOCUS_13540	sequence1:1442449..1448067(+)	partial			WP_011836786.1	CshA/CshB family fibrillar adhesin-related protein	12.6	7.9	49.4
MGA_1358	LOCUS_13550	sequence1:1448783..1448992(+)	internal_stop_codon	1448681..1448683(+)		WP_109983297.1	IS200/IS605 family transposase	97.1	42.1	77.6
MGA_1370	LOCUS_13670	sequence1:1459916..1461136(+)	partial			WP_011836928.1	YSIRK signal domain/LPXTG anchor domain surface protein	93.1	69.5	69.5
MGA_1404	LOCUS_14010	sequence1:1500397..1500855(+)	frameshift		1500831	WP_081026662.1	IS3 family transposase	92.1	59.8	73.6
MGA_1405	LOCUS_14020	sequence1:1500824..1501249(+)	frameshift,internal_stop_codon	1501432..1501434(+),1501249..1501251(+)	1500852,1500831	WP_162837466.1	IS3-like element IS861 family transposase	93.6	29.5	66.7
MGA_1406	LOCUS_14030	sequence1:1501274..1501432(+)	internal_stop_codon	1501247..1501249(+),1501430..1501432(+)		WP_140860145.1	IS3 family transposase	100.0	11.6	90.4
MGA_1442	LOCUS_14390	sequence1:1539548..1539739(-)	partial			WP_002904664.1	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	87.3	32.0	94.5
MGA_1472	LOCUS_14690	sequence1:1568489..1569178(-)	frameshift		1569194,1569431	WP_002917397.1	hypothetical protein	96.5	48.7	66.7
MGA_1473	LOCUS_14700	sequence1:1569070..1569813(-)	partial			WP_011837336.1	hypothetical protein	83.0	40.5	36.1
MGA_1531	LOCUS_15280	sequence1:1623156..1623824(-)	internal_stop_codon	1623972..1623974(-)		WP_002904720.1	ZIP family manganese transporter TmpA	100.0	81.0	90.5
MGA_1532	LOCUS_15290	sequence1:1624069..1624284(-)	frameshift,internal_stop_codon	1624069..1624071(-),1624384..1624386(-),1624357..1624359(-),1624405..1624407(-)	1624447	WP_011837121.1	8-oxo-dGTP diphosphatase	100.0	45.5	94.4
MGA_1533	LOCUS_15300	sequence1:1624397..1624534(-)	frameshift,internal_stop_codon	1624384..1624386(-),1624357..1624359(-),1624405..1624407(-)	1624447	WP_011837121.1	8-oxo-dGTP diphosphatase	82.2	23.7	94.6
MGA_1551	LOCUS_15480	sequence1:1640153..1640857(-)	internal_stop_codon	1640906..1640908(-),1640987..1640989(-)		WP_010922401.1	MFS transporter	96.2	55.2	77.3
MGA_1552	LOCUS_15490	sequence1:1640987..1641229(-)	internal_stop_codon	1640906..1640908(-),1641278..1641280(-),1640987..1640989(-)		WP_010922401.1	MFS transporter	96.2	19.0	81.8
MGA_1553	LOCUS_15500	sequence1:1641278..1641400(-)	internal_stop_codon	1641278..1641280(-),1640987..1640989(-)		WP_000074744.1	MFS transporter	100.0	9.6	77.5
MGA_1572	LOCUS_15690	sequence1:1658244..1658438(-)	internal_stop_codon	1658514..1658516(-)		WP_011836743.1	accessory Sec system protein Asp1	100.0	12.2	76.6
MGA_1573	LOCUS_15700	sequence1:1658514..1659824(-)	internal_stop_codon	1658514..1658516(-)		WP_011836743.1	accessory Sec system protein Asp1	100.0	82.9	75.7
MGA_1576	LOCUS_15730	sequence1:1662109..1664157(-)	partial			WP_011836740.1	SP_1767 family glycosyltransferase	97.9	62.3	90.1
MGA_1577	LOCUS_15740	sequence1:1664496..1664804(-)	partial			WP_011836739.1	accessory Sec-dependent serine-rich glycoprotein adhesin	91.2	7.1	33.9
MGA_1617	LOCUS_16140	sequence1:1719466..1719939(-)	internal_stop_codon	1719976..1719978(-)		WP_000557779.1	nicotinamide riboside transporter PnuC	98.7	57.8	95.5
MGA_1618	LOCUS_16150	sequence1:1720012..1720707(+)	partial			WP_002390049.1	IS6-like element ISS1N family transposase	46.8	47.8	95.4
MGA_1630	LOCUS_16270	sequence1:1729750..1731423(-)	partial			WP_001083683.1	AAA family ATPase	72.0	70.2	80.0
MGA_1643	LOCUS_16400	sequence1:1744273..1744599(-)	partial			WP_011861830.1	helix-turn-helix transcriptional regulator	68.5	53.2	49.3
MGA_1669	LOCUS_16660	sequence1:1766576..1767289(-)	partial			WP_012775191.1	hypothetical protein	43.5	68.5	29.1
MGA_1677	LOCUS_16740	sequence1:1777850..1779049(-)	frameshift		1779072,1779076,1779109,1779145,1779121,1779124,1779127,1779097,1779130,1779100,1779070,1779103	WP_011836785.1	CshA/CshB family fibrillar adhesin-related protein	99.7	19.0	64.6
MGA_1678	LOCUS_16750	sequence1:1779080..1786018(-)	frameshift		1779136,1779073,1779072,1779076,1779109,1779121,1779127,1779097,1779130,1779133,1779070,1779103	WP_011836784.1	CshA/CshB family fibrillar adhesin-related protein	99.4	76.4	60.4
MGA_1685	LOCUS_16820	sequence1:1791730..1793157(-)	partial			WP_011837024.1	hypothetical protein	65.7	49.1	50.3
MGA_1687	LOCUS_16840	sequence1:1796182..1797054(+)	partial			WP_000771154.1	choline-binding protein CbpC	66.2	57.2	37.0
MGA_1704	LOCUS_17010	sequence1:1809244..1810275(-)	partial			WP_011837031.1	hypothetical protein	49.0	23.9	36.9
MGA_1728	LOCUS_17250	sequence1:1834540..1834947(+)	partial			WP_011836891.1	hypothetical protein	60.0	58.0	50.0
MGA_1735	LOCUS_17320	sequence1:1839980..1840714(-)	internal_stop_codon	1840823..1840825(-)		WP_011836887.1	hypothetical protein	99.2	78.2	47.3
MGA_1747	LOCUS_17440	sequence1:1855065..1855202(+)	partial			WP_002897213.1	SPJ_0845 family protein	71.1	71.1	84.4
MGA_1772	LOCUS_17690	sequence1:1884280..1884420(-)	partial			WP_002895990.1	DUF1146 family protein	95.7	57.9	70.5
MGA_1779	LOCUS_17760	sequence1:1892237..1892800(+)	partial			WP_011837195.1	glycoside hydrolase family 25 protein	98.4	64.6	79.3
MGA_1892	LOCUS_18890	sequence1:2000475..2002709(-)	partial			WP_000762954.1	DUF262 domain-containing protein	39.9	48.7	29.9
MGA_1953	LOCUS_19490	sequence1:2058351..2061248(-)	partial			WP_000679939.1	LPXTG-anchored beta-N-acetylhexosaminidase StrH	27.3	18.6	27.5
MGA_1954	LOCUS_19500	sequence1:2061325..2072211(-)	partial			WP_002379133.1	isopeptide-forming domain-containing fimbrial protein	14.8	55.3	25.1
MGA_1963	LOCUS_19590	sequence1:2080180..2083353(-)	partial			WP_002900650.1	GBS Bsp-like repeat-containing protein	83.4	65.2	47.2
