# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_46	LOCUS_00440	sequence1:55406..55843(+)	frameshift,internal_stop_codon	55209..55211(+),55356..55358(+)	55349	WP_002263394.1	aspartate/glutamate racemase family protein	100.0	63.0	87.6
MGA_60	LOCUS_00580	sequence1:69899..70666(-)	partial			WP_000771103.1	choline-binding protein CbpC	51.8	34.3	38.3
MGA_96	LOCUS_00940	sequence1:110311..116079(+)	partial			WP_011068088.1	FctA domain-containing protein	51.4	42.4	32.4
MGA_115	LOCUS_01130	sequence1:134790..135140(-)	internal_stop_codon	135141..135143(-)		WP_002902079.1	hypothetical protein	100.0	71.6	38.8
MGA_123	LOCUS_01210	sequence1:143242..143478(+)	internal_stop_codon	143476..143478(+)		WP_002263364.1	zinc-dependent alcohol dehydrogenase family protein	75.6	16.9	72.9
MGA_127	LOCUS_01250	sequence1:145217..146029(+)	internal_stop_codon	145214..145216(+)		WP_048064511.1	radical SAM protein	91.1	54.7	25.6
MGA_134	LOCUS_01320	sequence1:150613..151257(-)	internal_stop_codon	150613..150615(-)		WP_032910596.1	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	80.4	22.9	77.9
MGA_137	LOCUS_01350	sequence1:153334..153933(+)	frameshift		153321,153219	WP_011101571.1	restriction endonuclease	99.5	69.1	37.5
MGA_182	LOCUS_01800	sequence1:195462..196013(+)	frameshift		195986	WP_011836432.1	class I SAM-dependent methyltransferase	96.7	71.4	90.4
MGA_183	LOCUS_01810	sequence1:195977..196204(+)	frameshift		195992	WP_011836432.1	class I SAM-dependent methyltransferase	96.0	29.0	93.1
MGA_191	LOCUS_01890	sequence1:203169..204023(+)	partial			WP_001098505.1	YdcF family protein	73.2	80.5	34.3
MGA_196	LOCUS_01940	sequence1:209892..210494(+)	frameshift		210395	WP_011836438.1	hypothetical protein	84.5	39.8	55.3
MGA_197	LOCUS_01950	sequence1:210491..211153(+)	frameshift		210401	WP_011836438.1	hypothetical protein	100.0	51.8	72.4
MGA_229	LOCUS_02270	sequence1:246608..246904(+)	partial			WP_000850388.1	lactococcin 972 family bacteriocin	66.3	63.6	44.6
MGA_235	LOCUS_02330	sequence1:253450..255093(+)	partial			WP_012582837.1	family 16 glycosylhydrolase	72.4	62.8	29.8
MGA_238	LOCUS_02360	sequence1:255972..256541(+)	partial			WP_003722596.1	TetR/AcrR family transcriptional regulator	73.5	69.3	28.0
MGA_244	LOCUS_02420	sequence1:261630..261854(+)	frameshift		261529,261571	WP_011016864.1	VOC family protein	95.9	55.9	56.3
MGA_250	LOCUS_02480	sequence1:266041..266871(+)	partial			WP_074016730.1	GIY-YIG nuclease family protein	47.8	45.4	41.0
MGA_252	LOCUS_02500	sequence1:267513..267947(+)	internal_stop_codon	267945..267947(+)		WP_011836484.1	6-phospho-beta-glucosidase	97.9	29.4	90.8
MGA_253	LOCUS_02510	sequence1:267963..268184(+)	internal_stop_codon	267945..267947(+)		WP_011836484.1	6-phospho-beta-glucosidase	100.0	15.2	93.2
MGA_266	LOCUS_02640	sequence1:281614..282129(+)	partial			WP_000592263.1	thiol reductase thioredoxin	45.6	51.7	37.2
MGA_267	LOCUS_02650	sequence1:282313..282699(+)	partial			WP_061603534.1	HAD family hydrolase	73.4	33.6	87.2
MGA_288	LOCUS_02860	sequence1:301442..301801(+)	frameshift,internal_stop_codon	301450..301452(+)	301458,301732	WP_002365476.1	GNAT family N-acetyltransferase	80.7	57.1	60.4
MGA_358	LOCUS_03540	sequence1:375421..375918(+)	partial			WP_011837482.1	CTP synthase	93.9	28.9	90.3
MGA_405	LOCUS_04010	sequence1:422956..423270(+)	partial			WP_002983650.1	DNA-directed RNA polymerase subunit omega	62.5	61.9	92.3
MGA_471	LOCUS_04670	sequence1:496214..497023(+)	frameshift		497020	WP_011837318.1	pyridoxal phosphate-dependent aminotransferase	100.0	69.3	73.6
MGA_472	LOCUS_04680	sequence1:497077..497379(+)	frameshift		497020	WP_011837318.1	pyridoxal phosphate-dependent aminotransferase	100.0	25.8	71.0
MGA_494	LOCUS_04900	sequence1:515830..516042(+)	frameshift,internal_stop_codon	516017..516019(+),516134..516136(+)	515994	WP_002262698.1	SdpI family protein	84.3	27.8	67.8
MGA_584	LOCUS_05800	sequence1:597985..598470(+)	frameshift		597970	WP_002900805.1	LURP-one-related family protein	100.0	83.4	75.2
MGA_586	LOCUS_05820	sequence1:601198..601482(-)	frameshift		601520	WP_000946120.1	ABC transporter ATP-binding protein	100.0	18.1	62.8
MGA_587	LOCUS_05830	sequence1:601506..602156(-)	frameshift		601526,602175	WP_000946120.1	ABC transporter ATP-binding protein	96.8	40.6	55.5
MGA_588	LOCUS_05840	sequence1:602158..602733(-)	frameshift		602175	WP_000946120.1	ABC transporter ATP-binding protein	97.4	36.1	55.9
MGA_616	LOCUS_06120	sequence1:637409..637768(+)	internal_stop_codon	637766..637768(+)		WP_011837227.1	Rrf2 family transcriptional regulator	100.0	79.3	71.4
MGA_626	LOCUS_06220	sequence1:647899..651381(+)	partial			WP_000792779.1	bacterial Ig-like domain-containing protein	77.2	51.2	58.8
MGA_672	LOCUS_06680	sequence1:710959..711810(+)	partial			WP_011986156.1	CPBP family intramembrane metalloprotease	73.5	70.6	34.4
MGA_674	LOCUS_06700	sequence1:712023..712223(-)	partial			WP_115276001.1	ISL3 family transposase	68.2	11.5	87.5
MGA_722	LOCUS_07180	sequence1:760362..760922(+)	partial			WP_002287463.1	glycoside hydrolase family 73 protein	67.7	29.9	57.9
MGA_773	LOCUS_07690	sequence1:818524..818823(+)	frameshift,internal_stop_codon	818468..818470(+),818441..818443(+)	818467	WP_011836904.1	glutamate 5-kinase	68.7	18.2	54.4
MGA_794	LOCUS_07900	sequence1:841220..841369(+)	partial			WP_011837076.1	GNAT family N-acetyltransferase	95.9	28.5	93.6
MGA_795	LOCUS_07910	sequence1:841428..841616(+)	partial			WP_011837076.1	GNAT family N-acetyltransferase	100.0	37.6	90.3
MGA_840	LOCUS_08360	sequence1:881196..881972(+)	partial			WP_011109431.1	LPXTG cell wall anchor domain-containing protein	83.7	71.6	32.6
MGA_841	LOCUS_08370	sequence1:881998..884199(+)	partial			WP_000167699.1	GbpC/Spa domain-containing protein	87.2	39.4	25.8
MGA_893	LOCUS_08890	sequence1:936158..936697(+)	frameshift,internal_stop_codon	936695..936697(+)	936820	WP_011837136.1	PHP domain-containing protein	100.0	71.9	78.8
MGA_936	LOCUS_09320	sequence1:981788..982441(+)	frameshift		981794	WP_201626268.1	hypothetical protein	94.0	79.3	33.2
MGA_967	LOCUS_09630	sequence1:1012544..1012720(-)	partial			WP_000048054.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_999	LOCUS_09950	sequence1:1046389..1047102(-)	partial			WP_011836679.1	DUF805 domain-containing protein	68.4	43.4	52.5
MGA_1008	LOCUS_10040	sequence1:1056187..1056630(-)	partial			WP_010972203.1	GNAT family N-acetyltransferase	64.6	62.6	40.2
MGA_1021	LOCUS_10170	sequence1:1067785..1068141(-)	partial			WP_000566988.1	GNAT family N-acetyltransferase	98.3	69.9	87.9
MGA_1026	LOCUS_10220	sequence1:1071296..1071439(-)	partial			WP_003579256.1	inorganic diphosphatase	100.0	43.5	42.6
MGA_1033	LOCUS_10290	sequence1:1078376..1079428(-)	partial			WP_011476037.1	PTS transporter subunit EIIC	94.6	74.8	35.4
MGA_1122	LOCUS_11180	sequence1:1167098..1167280(-)	frameshift,internal_stop_codon	1166953..1166955(-),1166950..1166952(-)	1166983,1166835,1166819,1167103	WP_235787673.1	GNAT family N-acetyltransferase	100.0	33.9	61.7
MGA_1139	LOCUS_11350	sequence1:1182325..1182495(+)	frameshift,internal_stop_codon	1182716..1182718(+)	1182577,1182682,1182553,1182474,1182751	WP_002900303.1	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	87.5	22.6	57.7
MGA_1165	LOCUS_11610	sequence1:1207336..1207467(-)	frameshift,internal_stop_codon	1207510..1207512(-)	1207347	WP_000120830.1	amino acid ABC transporter permease	93.0	18.8	82.5
MGA_1170	LOCUS_11660	sequence1:1214319..1214513(+)	partial			WP_000119153.1	GntR family transcriptional regulator	93.8	49.6	63.3
MGA_1173	LOCUS_11690	sequence1:1217769..1218083(-)	frameshift		1218127	WP_011837127.1	class I SAM-dependent methyltransferase	95.2	41.1	56.6
MGA_1174	LOCUS_11700	sequence1:1218071..1218484(-)	frameshift		1218127	WP_011837127.1	class I SAM-dependent methyltransferase	97.1	56.4	62.4
MGA_1181	LOCUS_11770	sequence1:1223668..1223838(+)	partial			WP_002895160.1	DUF3042 family protein	71.4	71.4	90.0
MGA_1200	LOCUS_11960	sequence1:1247334..1247594(-)	frameshift,internal_stop_codon	1247794..1247796(-),1247755..1247757(-),1247293..1247295(-)	1247346,1247859,1247583	WP_001122725.1	homoserine O-succinyltransferase	93.0	25.5	63.8
MGA_1204	LOCUS_12000	sequence1:1251246..1251680(+)	partial			WP_003722868.1	YdcF family protein	95.1	39.5	48.9
MGA_1256	LOCUS_12520	sequence1:1311423..1318007(-)	partial			WP_199567761.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	68.2	61.0	49.8
MGA_1351	LOCUS_13470	sequence1:1406029..1406472(+)	partial			WP_002263013.1	hypothetical protein	39.5	27.5	50.0
MGA_1356	LOCUS_13520	sequence1:1409758..1410327(-)	partial			WP_011837379.1	PTS transporter subunit IIBC	89.9	23.3	68.8
MGA_1364	LOCUS_13600	sequence1:1417152..1417463(-)	internal_stop_codon	1417470..1417472(-),1417533..1417535(-)		WP_002262299.1	glycosyltransferase family 8 protein	89.3	33.2	69.6
MGA_1365	LOCUS_13610	sequence1:1417533..1417934(-)	frameshift,internal_stop_codon	1417532..1417534(-),1417469..1417471(-)	1417942	WP_002262299.1	glycosyltransferase family 8 protein	97.7	46.9	62.3
MGA_1391	LOCUS_13850	sequence1:1448181..1450286(-)	partial			WP_010918506.1	class I SAM-dependent DNA methyltransferase	64.1	73.3	42.3
MGA_1394	LOCUS_13880	sequence1:1451567..1451920(-)	internal_stop_codon	1451921..1451923(-)		WP_000128173.1	cysteine hydrolase family protein	96.6	65.3	43.4
MGA_1407	LOCUS_14010	sequence1:1461578..1462924(-)	frameshift		1463043	WP_011836595.1	aspartate--tRNA ligase	99.1	76.8	95.9
MGA_1408	LOCUS_14020	sequence1:1462921..1463319(-)	frameshift		1463043	WP_011836595.1	aspartate--tRNA ligase	77.3	17.6	75.5
MGA_1425	LOCUS_14190	sequence1:1482134..1482631(-)	partial			WP_011837107.1	ATP-binding protein	89.1	24.3	31.2
MGA_1468	LOCUS_14620	sequence1:1529218..1529682(-)	internal_stop_codon	1529698..1529700(-),1529866..1529868(-)		WP_011837497.1	D-alanyl-D-alanine carboxypeptidase family protein	100.0	58.8	89.6
MGA_1470	LOCUS_14640	sequence1:1530975..1531148(-)	frameshift		1531167	WP_002925991.1	histidine phosphatase family protein	94.7	23.2	70.4
MGA_1471	LOCUS_14650	sequence1:1531156..1531668(-)	frameshift		1531167	WP_002925991.1	histidine phosphatase family protein	98.8	72.1	78.0
MGA_1493	LOCUS_14870	sequence1:1555949..1556671(-)	internal_stop_codon	1556750..1556752(-)		WP_000147505.1	DUF389 domain-containing protein	100.0	69.1	90.9
MGA_1494	LOCUS_14880	sequence1:1556750..1556995(-)	internal_stop_codon	1556750..1556752(-)		WP_000147505.1	DUF389 domain-containing protein	100.0	23.2	100.0
MGA_1497	LOCUS_14910	sequence1:1560596..1561177(-)	partial			WP_003138385.1	IS256-like element IS905 family transposase	99.5	49.1	94.3
MGA_1510	LOCUS_15040	sequence1:1574449..1575204(+)	partial			WP_000823931.1	DNA/RNA non-specific endonuclease	44.6	29.7	37.9
MGA_1514	LOCUS_15080	sequence1:1578666..1580027(-)	partial			WP_068610434.1	carbohydrate-binding protein	91.6	31.6	22.6
MGA_1524	LOCUS_15180	sequence1:1591600..1591824(-)	partial			WP_002893807.1	GlsB/YeaQ/YmgE family stress response membrane protein	71.6	69.7	90.6
MGA_1532	LOCUS_15260	sequence1:1608630..1608764(+)	frameshift,internal_stop_codon	1608471..1608473(+),1608603..1608605(+)	1608881,1608722	WP_109289924.1	IS3 family transposase	70.5	6.9	90.3
MGA_1533	LOCUS_15270	sequence1:1609008..1609340(+)	frameshift,internal_stop_codon	1609339..1609341(+)	1608881,1608722	WP_109289924.1	IS3 family transposase	100.0	24.5	80.0
MGA_1549	LOCUS_15430	sequence1:1620736..1621521(+)	partial			WP_013399531.1	MFS transporter	96.6	65.8	54.4
MGA_1553	LOCUS_15470	sequence1:1624780..1624995(+)	frameshift,internal_stop_codon	1624994..1624996(+)	1624798,1624999	WP_001153836.1	IS30 family transposase	90.1	19.1	67.2
MGA_1554	LOCUS_15480	sequence1:1624961..1625524(+)	frameshift,internal_stop_codon	1625523..1625525(+)	1624993,1624798	WP_205010637.1	IS30 family transposase	93.6	54.9	76.0
MGA_1567	LOCUS_15610	sequence1:1637621..1637770(+)	internal_stop_codon	1637768..1637770(+)		WP_011921895.1	hypothetical protein	100.0	19.3	85.7
MGA_1568	LOCUS_15620	sequence1:1637774..1638385(+)	internal_stop_codon	1637768..1637770(+)		WP_011921895.1	hypothetical protein	99.5	79.5	76.7
MGA_1574	LOCUS_15680	sequence1:1642272..1642580(-)	frameshift,internal_stop_codon	1642272..1642274(-)	1642593	WP_002310789.1	ATP-binding protein	99.0	12.0	38.2
MGA_1576	LOCUS_15700	sequence1:1643894..1644454(-)	frameshift		1644498	WP_002267537.1	mutanobactin A biosynthesis phosphopantetheinyl transferase MubP	86.0	70.9	35.8
MGA_1578	LOCUS_15720	sequence1:1644663..1647080(-)	partial			WP_003721622.1	ABC transporter permease	68.4	48.9	34.7
MGA_1580	LOCUS_15740	sequence1:1647786..1650968(-)	partial			WP_054994098.1	non-ribosomal peptide synthetase	96.4	11.0	28.3
MGA_1582	LOCUS_15760	sequence1:1652779..1655919(-)	partial			WP_001255763.1	non-ribosomal peptide synthetase	98.6	20.8	25.2
MGA_1656	LOCUS_16500	sequence1:1739831..1740151(-)	frameshift,internal_stop_codon	1740363..1740365(-)	1740145,1740410,1740124,1740266	WP_115276001.1	ISL3 family transposase	76.4	19.4	53.1
MGA_1659	LOCUS_16530	sequence1:1742066..1742359(+)	internal_stop_codon	1742357..1742359(+),1741955..1741957(+)		WP_126466402.1	site-specific integrase	96.9	24.2	84.0
MGA_1692	LOCUS_16840	sequence1:1765287..1765832(-)	frameshift		1765307	WP_011836334.1	uridine kinase	96.1	82.1	85.1
MGA_1695	LOCUS_16870	sequence1:1768464..1768781(-)	frameshift,internal_stop_codon	1768442..1768444(-)	1768466	WP_011836331.1	kinase	100.0	61.8	78.1
MGA_1699	LOCUS_16910	sequence1:1772806..1773156(+)	internal_stop_codon	1772752..1772754(+)		WP_011836328.1	YcxB family protein	94.8	68.3	53.6
MGA_1705	LOCUS_16970	sequence1:1778464..1781004(-)	partial			WP_000671444.1	fibronectin-binding SSURE repeat adhesin PavB	88.1	64.2	55.0
MGA_1712	LOCUS_17040	sequence1:1787628..1788293(-)	internal_stop_codon	1787628..1787630(-)		WP_003014975.1	NAD-dependent epimerase/dehydratase family protein	99.5	83.3	49.1
MGA_1737	LOCUS_17290	sequence1:1814747..1815238(-)	frameshift		1815327	WP_005592074.1	type II CAAX endopeptidase family protein	100.0	74.4	77.3
MGA_1748	LOCUS_17400	sequence1:1824260..1824853(-)	partial			WP_011030355.1	TIR domain-containing protein	52.3	59.7	33.3
MGA_1750	LOCUS_17420	sequence1:1825320..1825943(-)	partial			WP_002287017.1	helix-turn-helix domain-containing protein	33.8	26.3	49.3
MGA_1752	LOCUS_17440	sequence1:1826280..1826543(+)	frameshift		1826471	WP_000424672.1	Rha family transcriptional regulator	92.0	34.1	66.2
MGA_1753	LOCUS_17450	sequence1:1826503..1826904(+)	frameshift		1826471	WP_000424672.1	Rha family transcriptional regulator	98.5	63.0	70.2
MGA_1763	LOCUS_17550	sequence1:1829855..1830670(+)	partial			WP_010905350.1	phage replisome organiser protein	45.8	48.1	53.2
MGA_1793	LOCUS_17850	sequence1:1863155..1863463(+)	partial			WP_006268963.1	hypothetical protein	100.0	50.7	99.0
MGA_1798	LOCUS_17900	sequence1:1867462..1869375(-)	partial			WP_127742798.1	class III lanthionine synthetase LanKC	50.2	37.5	27.1
MGA_1800	LOCUS_17920	sequence1:1871057..1871209(-)	partial			WP_002917983.1	cation diffusion facilitator family transporter	74.0	12.7	64.9
MGA_1812	LOCUS_18040	sequence1:1883112..1884113(+)	partial			WP_011837698.1	DUF1700 domain-containing protein	24.9	41.7	54.2
MGA_1820	LOCUS_18120	sequence1:1890285..1891046(+)	internal_stop_codon	1890150..1890152(+)		WP_011837644.1	Rgg/GadR/MutR family transcriptional regulator	92.1	83.3	46.6
