# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_53	LOCUS_00530	sequence1:60980..61396(+)	partial			WP_011704101.1	response regulator transcription factor	99.3	66.2	73.0
MGA_261	LOCUS_02610	sequence1:301283..301456(+)	partial			WP_024945207.1	sulfurtransferase complex subunit TusB	100.0	62.0	70.2
MGA_278	LOCUS_02780	sequence1:324606..325310(-)	partial			WP_003104791.1	SDR family NAD(P)-dependent oxidoreductase	77.4	67.7	41.4
MGA_309	LOCUS_03090	sequence1:361031..361759(+)	frameshift		360857	WP_089600859.1	IS3 family transposase	99.6	62.8	66.0
MGA_365	LOCUS_03650	sequence1:419958..420251(-)	partial			WP_011707590.1	YraN family protein	100.0	74.6	91.8
MGA_379	LOCUS_03790	sequence1:434944..435636(+)	partial			WP_000012402.1	flagellar assembly protein FliH	74.8	64.3	33.5
MGA_384	LOCUS_03840	sequence1:438183..438815(-)	partial			WP_002211436.1	flagellar basal body P-ring formation chaperone FlgA	94.3	70.6	25.1
MGA_403	LOCUS_04030	sequence1:454410..455459(+)	partial			WP_005478082.1	flagellar hook-length control protein FliK	54.4	55.3	35.7
MGA_409	LOCUS_04090	sequence1:458909..459967(-)	partial			WP_013095686.1	murein transglycosylase D	50.3	39.9	39.2
MGA_479	LOCUS_04790	sequence1:538980..540107(+)	partial			WP_011074202.1	cytochrome c oxidase subunit II	94.4	68.6	61.6
MGA_561	LOCUS_05610	sequence1:621910..623391(+)	partial			WP_010956680.1	sensor domain-containing diguanylate cyclase	45.2	58.0	31.9
MGA_570	LOCUS_05700	sequence1:634540..634866(+)	partial			WP_002211255.1	carboxymuconolactone decarboxylase family protein	74.1	57.1	50.0
MGA_572	LOCUS_05720	sequence1:635246..635770(+)	partial			WP_011027533.1	DUF4865 family protein	75.9	67.2	40.6
MGA_577	LOCUS_05770	sequence1:638747..641779(-)	partial			WP_000717964.1	lipoprotein adhesin LigB	80.8	44.6	32.8
MGA_578	LOCUS_05780	sequence1:642134..644800(-)	partial			WP_000160478.1	Ig-like domain-containing protein	85.9	37.5	31.0
MGA_649	LOCUS_06490	sequence1:729695..730423(-)	frameshift		730596	WP_089600859.1	IS3 family transposase	99.6	62.8	66.0
MGA_712	LOCUS_07120	sequence1:796024..796416(-)	partial			WP_011707271.1	SMR family transporter	86.2	72.7	82.1
MGA_726	LOCUS_07260	sequence1:816431..816592(-)	partial			WP_011704814.1	thiamine ABC transporter ATP-binding protein	77.4	17.4	82.9
MGA_798	LOCUS_07980	sequence1:894676..895329(-)	partial			WP_001212716.1	tetratricopeptide repeat protein	84.3	37.3	36.3
MGA_825	LOCUS_08250	sequence1:918499..920244(-)	partial			WP_011072908.1	phage N-6-adenine-methyltransferase	40.1	68.5	48.5
MGA_827	LOCUS_08270	sequence1:921582..922316(+)	partial			WP_001336397.1	hypothetical protein	32.8	69.5	51.2
MGA_828	LOCUS_08280	sequence1:922335..922844(-)	partial			WP_226992640.1	S24 family peptidase	82.2	46.7	45.4
MGA_838	LOCUS_08380	sequence1:927431..928240(+)	partial			WP_001072672.1	KilA-N domain-containing protein	74.7	70.1	36.1
MGA_839	LOCUS_08390	sequence1:928272..928895(+)	partial			WP_000034474.1	exonuclease	83.1	20.2	30.1
MGA_853	LOCUS_08530	sequence1:937143..937772(+)	partial			WP_011030116.1	SOS response-associated peptidase	65.1	58.7	30.1
MGA_864	LOCUS_08640	sequence1:945006..945941(+)	partial			WP_000123254.1	S49 family peptidase	90.7	66.1	34.2
MGA_865	LOCUS_08650	sequence1:946010..947299(+)	partial			WP_013389876.1	phage major capsid protein	60.4	79.9	27.2
MGA_873	LOCUS_08730	sequence1:951103..954678(+)	partial			WP_010938783.1	tape measure protein	31.4	41.2	25.6
MGA_881	LOCUS_08810	sequence1:963054..963563(+)	partial			WP_011073355.1	GspH/FimT family pseudopilin	72.8	72.6	32.0
MGA_914	LOCUS_09140	sequence1:997397..998035(+)	partial			WP_011704935.1	peptidylprolyl isomerase	69.3	69.3	98.0
MGA_1020	LOCUS_10200	sequence1:1120790..1121596(+)	partial			WP_011261849.1	hypothetical protein	56.7	63.7	32.1
MGA_1022	LOCUS_10220	sequence1:1122232..1122741(-)	internal_stop_codon	1122775..1122777(-)		WP_089600859.1	IS3 family transposase	98.8	43.7	71.3
MGA_1023	LOCUS_10230	sequence1:1122775..1122960(-)	frameshift,internal_stop_codon	1122774..1122776(-)	1123136	WP_076611921.1	IS3-like element ISSod17 family transposase	91.8	14.6	60.7
MGA_1027	LOCUS_10270	sequence1:1124331..1125125(+)	partial			WP_000904079.1	type VI secretion system immunity protein TsiV2	35.2	38.4	37.6
MGA_1158	LOCUS_11580	sequence1:1260994..1261122(+)	partial			WP_011705174.1	copper homeostasis protein CutC	69.0	12.0	96.6
MGA_1159	LOCUS_11590	sequence1:1261245..1261373(+)	partial			WP_011705174.1	copper homeostasis protein CutC	69.0	12.0	96.6
MGA_1160	LOCUS_11600	sequence1:1261373..1261501(+)	partial			WP_011705174.1	copper homeostasis protein CutC	69.0	12.0	93.1
MGA_1161	LOCUS_11610	sequence1:1261510..1261629(+)	partial			WP_011705174.1	copper homeostasis protein CutC	74.4	12.0	93.1
MGA_1170	LOCUS_11700	sequence1:1269528..1269671(-)	partial			WP_016349931.1	DUF1107 domain-containing protein	100.0	66.2	70.2
MGA_1198	LOCUS_11980	sequence1:1305952..1307415(-)	partial			WP_013383389.1	OmpA family protein	43.9	31.5	29.9
MGA_1276	LOCUS_12760	sequence1:1395238..1395426(-)	internal_stop_codon	1395238..1395240(-)		WP_000073958.1	transposase	96.8	37.3	56.7
MGA_1278	LOCUS_12780	sequence1:1396403..1397356(-)	frameshift		1397429	WP_004206794.1	BCCT family transporter	98.7	46.3	51.8
MGA_1279	LOCUS_12790	sequence1:1397473..1397886(+)	partial			WP_011706876.1	DNA-binding domain-containing protein	81.8	44.6	62.5
MGA_1286	LOCUS_12860	sequence1:1403752..1404501(-)	partial			WP_011706869.1	bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein MobB/molybdopterin molybdotransferase MoeA	65.1	27.9	72.8
MGA_1323	LOCUS_13230	sequence1:1447005..1448162(+)	partial			WP_010939148.1	GGDEF domain-containing protein	46.2	57.4	40.5
MGA_1379	LOCUS_13790	sequence1:1506315..1506749(+)	partial			WP_011070734.1	DMT family transporter	68.1	64.7	40.4
MGA_1381	LOCUS_13810	sequence1:1507401..1507934(+)	partial			WP_011706730.1	metal-dependent hydrolase	75.1	66.2	84.2
MGA_1416	LOCUS_14160	sequence1:1553844..1554290(+)	partial			WP_010880882.1	glycerol-3-phosphate cytidylyltransferase	83.8	73.8	43.2
MGA_1417	LOCUS_14170	sequence1:1554287..1554913(+)	partial			WP_013528123.1	SDR family oxidoreductase	49.5	38.5	38.7
MGA_1422	LOCUS_14220	sequence1:1559596..1560372(+)	partial			WP_003422862.1	glycosyltransferase family 2 protein	70.5	73.5	34.2
MGA_1525	LOCUS_15240	sequence1:1673869..1674171(+)	partial			WP_000810367.1	YkvA family protein	73.0	58.7	38.4
MGA_1528	LOCUS_15270	sequence1:1676125..1676772(+)	partial			WP_162177623.1	TerD family protein	28.4	11.2	62.3
MGA_1539	LOCUS_15380	sequence1:1689663..1690331(-)	partial			WP_003231362.1	TM2 domain-containing protein	29.7	83.5	47.0
MGA_1548	LOCUS_15470	sequence1:1705098..1705535(-)	partial			WP_011706576.1	methyl-accepting chemotaxis protein	100.0	33.8	86.9
MGA_1550	LOCUS_15490	sequence1:1706816..1707394(-)	partial			WP_011706576.1	methyl-accepting chemotaxis protein	98.4	44.1	87.3
MGA_1551	LOCUS_15500	sequence1:1707445..1708173(-)	frameshift		1708346	WP_089600859.1	IS3 family transposase	99.6	62.8	66.0
MGA_1561	LOCUS_15600	sequence1:1716564..1718822(-)	partial			WP_013384050.1	ATP-binding protein	67.7	64.6	31.7
MGA_1590	LOCUS_15890	sequence1:1749957..1750862(+)	partial			WP_004406604.1	sensor domain-containing diguanylate cyclase	53.5	40.0	45.5
MGA_1592	LOCUS_15910	sequence1:1752212..1753210(-)	partial			WP_015704142.1	DUF1176 domain-containing protein	97.6	47.2	38.2
MGA_1601	LOCUS_16000	sequence1:1760145..1760414(+)	frameshift,internal_stop_codon	1760527..1760529(+)	1760400,1760217,1760538,1760460	WP_016351173.1	nuclear transport factor 2 family protein	69.7	45.6	80.6
MGA_1614	LOCUS_16130	sequence1:1779269..1791544(+)	partial			WP_070065546.1	enhanced entry virulence factor RtxA	98.4	68.4	24.4
MGA_1639	LOCUS_16380	sequence1:1820049..1821023(-)	partial			WP_011963867.1	AraC family transcriptional regulator	36.1	39.4	30.8
MGA_1776	LOCUS_17750	sequence1:1976975..1977469(-)	partial			WP_011705682.1	DUF2982 domain-containing protein	100.0	70.4	82.3
MGA_1804	LOCUS_18030	sequence1:2002713..2003192(+)	frameshift,internal_stop_codon	2003190..2003192(+)	2003327,2002663	WP_019081584.1	HAD-IIB family hydrolase	100.0	60.0	45.9
MGA_1831	LOCUS_18300	sequence1:2039264..2046001(+)	frameshift		2045977,2045950	WP_011706294.1	retention module-containing protein	96.7	61.7	51.1
MGA_1832	LOCUS_18310	sequence1:2046094..2052408(+)	frameshift		2045977,2045950	WP_011706294.1	retention module-containing protein	80.8	47.9	65.0
MGA_1834	LOCUS_18330	sequence1:2053978..2054202(-)	partial			WP_011706292.1	glycerol-3-phosphate dehydrogenase subunit GlpB	45.9	7.7	85.3
MGA_1837	LOCUS_18360	sequence1:2057285..2057647(-)	partial			WP_206819879.1	YchJ family protein	88.3	70.2	90.6
MGA_1956	LOCUS_19550	sequence1:2194696..2195103(+)	partial			WP_026080374.1	translation initiation factor IF-3	100.0	74.2	89.6
MGA_2008	LOCUS_20070	sequence1:2254238..2254462(-)	partial			WP_005477614.1	hypothetical protein	86.5	72.8	51.6
MGA_2015	LOCUS_20140	sequence1:2259979..2260389(-)	frameshift		2259822,2259899,2259862,2259999	WP_005477655.1	zonular occludens toxin domain-containing protein	95.6	28.2	46.2
MGA_2022	LOCUS_20210	sequence1:2264416..2264964(-)	frameshift		2264151,2264212,2264454,2264279	WP_001881266.1	phage/plasmid replication protein, II/X family	93.4	32.4	34.9
MGA_2027	LOCUS_20260	sequence1:2267761..2268222(-)	frameshift		2267832	WP_005477655.1	zonular occludens toxin domain-containing protein	88.9	29.5	42.6
MGA_2030	LOCUS_20290	sequence1:2270217..2270441(-)	partial			WP_005477614.1	hypothetical protein	86.5	72.8	51.6
MGA_2040	LOCUS_20390	sequence1:2278212..2278436(-)	partial			WP_005477614.1	hypothetical protein	86.5	72.8	51.6
MGA_2048	LOCUS_20470	sequence1:2283561..2285087(+)	partial			WP_002212532.1	replication initiation factor domain-containing protein	51.6	60.2	29.4
MGA_2057	LOCUS_20560	sequence1:2290305..2290652(-)	partial			WP_010892520.1	phage protein	74.8	70.2	52.3
MGA_2060	LOCUS_20590	sequence1:2292946..2293590(+)	frameshift		2293530	WP_005480794.1	paraquat-inducible protein A	89.7	46.5	32.0
MGA_2080	LOCUS_20790	sequence1:2311961..2312350(+)	partial			WP_206817289.1	nucleoside triphosphate pyrophosphatase	100.0	66.8	82.9
MGA_2160	LOCUS_21590	sequence1:2411688..2412356(-)	partial			WP_011705999.1	dicarboxylate/amino acid:cation symporter	99.1	53.4	94.1
MGA_2162	LOCUS_21610	sequence1:2412873..2413493(-)	partial			WP_011705999.1	dicarboxylate/amino acid:cation symporter	95.6	47.8	89.8
MGA_2175	LOCUS_21740	sequence1:2422809..2423660(-)	frameshift,internal_stop_codon	2423758..2423760(-),2423695..2423697(-)	2423787,2423932,2423812	WP_206817517.1	S1-like domain-containing RNA-binding protein	99.6	78.0	86.3
MGA_2223	LOCUS_22220	sequence1:2476917..2477309(+)	partial			WP_011389704.1	helix-turn-helix transcriptional regulator	99.2	47.1	62.0
MGA_2283	LOCUS_22820	sequence1:2555408..2556193(+)	partial			WP_011705857.1	energy transducer TonB	46.0	44.9	63.3
MGA_2335	LOCUS_23340	sequence1:2610580..2611308(+)	frameshift		2610406	WP_089600859.1	IS3 family transposase	99.6	62.8	66.0
MGA_2377	LOCUS_23760	sequence1:2658702..2659880(-)	partial			WP_002288633.1	glycosyl hydrolase 53 family protein	96.9	69.1	47.1
MGA_2378	LOCUS_23770	sequence1:2659882..2660229(-)	partial			WP_000475711.1	PTS glucose transporter subunit IIBC	80.9	19.3	47.3
MGA_2388	LOCUS_23870	sequence1:2672867..2673289(-)	frameshift		2673306	WP_002215759.1	maltoporin	99.3	33.4	49.3
MGA_2389	LOCUS_23880	sequence1:2673286..2674023(-)	frameshift		2673315	WP_013097211.1	maltoporin	97.6	54.2	60.8
MGA_2396	LOCUS_23950	sequence1:2679933..2680661(+)	frameshift		2679759	WP_089600859.1	IS3 family transposase	99.6	62.8	66.0
MGA_2397	LOCUS_23960	sequence1:2680899..2681117(-)	partial			WP_005767792.1	NADP-dependent oxidoreductase	95.8	20.7	56.5
MGA_2399	LOCUS_23980	sequence1:2681392..2681793(-)	internal_stop_codon	2681971..2681973(-)		WP_011267491.1	TolC family protein	90.2	24.5	50.0
MGA_2400	LOCUS_23990	sequence1:2681971..2682300(-)	internal_stop_codon	2681971..2681973(-)		WP_011267491.1	TolC family protein	82.6	18.4	57.8
MGA_2410	LOCUS_24090	sequence1:2697044..2698342(-)	partial			WP_000502257.1	DUF262 domain-containing protein	95.6	61.5	27.1
MGA_2413	LOCUS_24120	sequence1:2700536..2701876(-)	partial			WP_005694081.1	restriction endonuclease subunit S	56.1	60.3	42.0
MGA_2416	LOCUS_24150	sequence1:2705642..2705950(+)	partial			WP_011963913.1	NAD-dependent deacylase	88.2	38.7	45.6
MGA_2474	LOCUS_24730	sequence1:2780135..2780800(+)	partial			WP_163137047.1	hydrogenase nickel incorporation protein HypB	100.0	61.2	93.2
MGA_2487	LOCUS_24860	sequence1:2793549..2796107(-)	partial			WP_152745183.1	N-acetylmuramidase domain-containing protein	71.7	61.3	31.6
MGA_2504	LOCUS_25030	sequence1:2818631..2819008(-)	partial			WP_011705712.1	type VI secretion system contractile sheath small subunit	100.0	74.9	90.4
MGA_2511	LOCUS_25100	sequence1:2823457..2823651(-)	partial			WP_005112307.1	hypothetical protein	93.8	69.0	50.0
MGA_2513	LOCUS_25120	sequence1:2825185..2826198(-)	frameshift,internal_stop_codon	2826318..2826320(-),2826222..2826224(-)	2826290	WP_011105498.1	RHS repeat-associated core domain-containing protein	48.1	9.5	65.0
MGA_2515	LOCUS_25140	sequence1:2827485..2828141(-)	partial			WP_206819810.1	tetratricopeptide repeat protein	71.1	33.9	81.9
MGA_2543	LOCUS_25420	sequence1:2866226..2866927(+)	partial			WP_010895592.1	DUF1294 domain-containing protein	47.2	46.2	33.9
MGA_2562	LOCUS_25610	sequence1:2888256..2889398(+)	partial			WP_001901330.1	cyclic AMP-GMP synthase	80.3	70.6	34.3
MGA_2593	LOCUS_25920	sequence1:2926185..2926382(-)	frameshift		2926387	WP_016351085.1	YchE family NAAT transporter	92.3	28.4	90.0
MGA_2594	LOCUS_25930	sequence1:2926298..2926819(-)	frameshift		2926387	WP_016351085.1	YchE family NAAT transporter	82.7	67.8	91.6
MGA_2624	LOCUS_26230	sequence1:2961835..2961960(+)	partial			WP_011705598.1	ZIP family metal transporter	92.7	12.3	100.0
MGA_2981	LOCUS_29800	sequence1:3344303..3344482(+)	partial			WP_011073377.1	DUF3545 family protein	67.8	63.9	80.0
MGA_3122	LOCUS_31210	sequence1:3491911..3492249(-)	partial			WP_011707077.1	triose-phosphate isomerase	100.0	44.1	92.9
MGA_3153	LOCUS_31520	sequence1:3520795..3522582(+)	partial			WP_011707108.1	EAL domain-containing protein	93.3	65.1	61.6
MGA_3176	LOCUS_31750	sequence1:3550511..3551365(+)	frameshift		3550341	WP_011707133.1	peptide chain release factor 2	100.0	77.8	94.4
MGA_3191	LOCUS_31900	sequence1:3565693..3566106(-)	partial			WP_011070822.1	DUF2541 family protein	74.5	73.9	53.9
MGA_3245	LOCUS_32440	sequence1:3634261..3635076(-)	internal_stop_codon	3635185..3635187(-)		WP_076611921.1	IS3-like element ISSod17 family transposase	99.6	70.2	63.7
MGA_3337	LOCUS_33360	sequence1:3751972..3753447(+)	partial			WP_011263224.1	GGDEF domain-containing protein	58.2	59.8	29.4
MGA_3343	LOCUS_33420	sequence1:3758768..3758947(-)	partial			WP_011704697.1	CphA family subclass B2 metallo-beta-lactamase	52.5	12.3	77.4
MGA_3354	LOCUS_33530	sequence1:3769245..3769442(-)	internal_stop_codon	3769245..3769247(-)		WP_011072767.1	GNAT family N-acetyltransferase	96.9	41.2	44.4
MGA_3399	LOCUS_33970	sequence1:3822356..3823486(-)	partial			WP_011707364.1	cell envelope integrity protein TolA	29.8	28.9	91.1
MGA_3488	LOCUS_34860	sequence1:3928793..3931516(-)	partial			WP_011073358.1	PilC/PilY family type IV pilus protein	91.0	70.0	42.3
MGA_3569	LOCUS_35670	sequence1:4006147..4006932(-)	partial			WP_005771746.1	Dot/Icm type IV secretion system effector CoxDFB4	40.2	71.3	31.8
MGA_3634	LOCUS_36320	sequence1:4069610..4070338(-)	frameshift		4070511	WP_089600859.1	IS3 family transposase	99.6	62.8	66.0
MGA_3720	LOCUS_37180	sequence1:4157619..4157870(+)	partial			WP_011704444.1	alpha/beta fold hydrolase	97.6	36.3	92.6
MGA_3744	LOCUS_37420	sequence1:4180763..4181833(-)	frameshift		4181920,4181868	WP_011704418.1	2-iminoacetate synthase ThiH	100.0	84.2	97.8
MGA_3789	LOCUS_37870	sequence1:4232442..4232984(-)	frameshift		4232950	WP_011704363.1	MSHA fimbrial biogenesis protein MshI1	92.2	84.3	72.9
MGA_3804	LOCUS_38020	sequence1:4250598..4252340(-)	partial			WP_011704348.1	signal recognition particle-docking protein FtsY	60.5	55.5	94.3
MGA_3814	LOCUS_38120	sequence1:4259727..4259891(-)	partial			WP_005308036.1	twin-arginine translocase TatA/TatE family subunit	64.8	66.0	91.4
MGA_3824	LOCUS_38220	sequence1:4268586..4268744(+)	partial			WP_016349126.1	hypothetical protein	55.8	63.0	96.6
MGA_3944	LOCUS_39420	sequence1:4384206..4385075(+)	partial			WP_011021381.1	HAD family hydrolase	77.2	68.3	24.6
MGA_3993	LOCUS_39910	sequence1:4445057..4445737(-)	partial			WP_006995535.1	O-antigen ligase	98.2	53.9	34.2
MGA_4007	LOCUS_40050	sequence1:4467657..4468040(-)	frameshift		4468054	WP_011704169.1	TrkH family potassium uptake protein	100.0	26.2	89.0
MGA_4008	LOCUS_40060	sequence1:4468040..4469113(-)	frameshift		4468054	WP_011704169.1	TrkH family potassium uptake protein	99.2	73.0	91.5
MGA_4020	LOCUS_40180	sequence1:4481915..4482124(+)	frameshift		4482148	WP_011704159.1	RidA family protein	42.0	25.2	93.1
MGA_4029	LOCUS_40270	sequence1:4491178..4491951(+)	partial			WP_038967508.1	transporter substrate-binding domain-containing protein	73.9	76.8	28.2
MGA_4046	LOCUS_40440	sequence1:4510847..4511440(-)	frameshift		4511472	WP_011704136.1	LysE family translocator	91.4	78.9	73.3
MGA_4050	LOCUS_40480	sequence1:4515595..4515852(+)	partial			WP_005307315.1	accessory factor UbiK family protein	74.1	74.1	92.1
MGA_4107	LOCUS_41050	sequence1:4582893..4583099(-)	partial			WP_011707927.1	ribonuclease P protein component	100.0	57.1	95.6