{ "tc_result": [ { "organism_name": "Corynebacterium renale", "strain": "strain=NCTC7448", "accession": "GCA_900478035.1", "taxid": 1724, "species_taxid": 1724, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 776, "total_fragments": 778, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium renale", "strain": "strain=DSM 20688", "accession": "GCA_002563965.1", "taxid": 1724, "species_taxid": 1724, "relation_to_type": "type", "validated": true, "ani": 99.9996, "matched_fragments": 777, "total_fragments": 778, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium ulcerans", "strain": "strain=FDAARGOS_1118", "accession": "GCA_016727365.1", "taxid": 65058, "species_taxid": 65058, "relation_to_type": "type", "validated": true, "ani": 79.1543, "matched_fragments": 72, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium ulcerans", "strain": "strain=NCTC7910", "accession": "GCA_900187135.1", "taxid": 65058, "species_taxid": 65058, "relation_to_type": "type", "validated": true, "ani": 79.0134, "matched_fragments": 70, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium striatum", "strain": "strain=NCTC764", "accession": "GCA_900447675.1", "taxid": 43770, "species_taxid": 43770, "relation_to_type": "type", "validated": true, "ani": 78.5611, "matched_fragments": 129, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium callunae", "strain": "strain=DSM 20147", "accession": "GCA_000344785.1", "taxid": 1721, "species_taxid": 1721, "relation_to_type": "type", "validated": true, "ani": 78.5432, "matched_fragments": 93, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium vitaeruminis", "strain": "strain=DSM 20294", "accession": "GCA_000550805.1", "taxid": 38305, "species_taxid": 38305, "relation_to_type": "type", "validated": true, "ani": 78.4723, "matched_fragments": 145, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium striatum", "strain": "strain=FDAARGOS_1054", "accession": "GCA_016403285.1", "taxid": 43770, "species_taxid": 43770, "relation_to_type": "type", "validated": true, "ani": 78.2458, "matched_fragments": 128, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium accolens", "strain": "strain=DSM 44278", "accession": "GCA_023520795.1", "taxid": 38284, "species_taxid": 38284, "relation_to_type": "type", "validated": true, "ani": 78.1565, "matched_fragments": 115, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium frankenforstense", "strain": "strain=ST18", "accession": "GCA_001941485.1", "taxid": 1230998, "species_taxid": 1230998, "relation_to_type": "type", "validated": true, "ani": 78.1299, "matched_fragments": 187, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium striatum", "strain": "strain=NBRC 15291", "accession": "GCA_006538485.1", "taxid": 43770, "species_taxid": 43770, "relation_to_type": "type", "validated": true, "ani": 78.1086, "matched_fragments": 122, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium halotolerans", "strain": "strain=YIM 70093 = DSM 44683", "accession": "GCA_000341345.1", "taxid": 225326, "species_taxid": 225326, "relation_to_type": "type", "validated": true, "ani": 78.047, "matched_fragments": 162, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium silvaticum", "strain": "strain=KL0182", "accession": "GCA_004382825.2", "taxid": 2320431, "species_taxid": 2320431, "relation_to_type": "type", "validated": true, "ani": 77.8802, "matched_fragments": 70, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium callunae", "strain": "strain=DSM 20147", "accession": "GCA_000420585.1", "taxid": 1721, "species_taxid": 1721, "relation_to_type": "type", "validated": true, "ani": 77.6878, "matched_fragments": 87, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium aquatimens", "strain": "strain=DSM 45632", "accession": "GCA_015752125.1", "taxid": 1190508, "species_taxid": 1190508, "relation_to_type": "type", "validated": true, "ani": 77.6539, "matched_fragments": 88, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium marinum", "strain": "strain=CGMCC 1.6998", "accession": "GCA_014645275.1", "taxid": 349751, "species_taxid": 349751, "relation_to_type": "type", "validated": true, "ani": 77.5699, "matched_fragments": 156, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium accolens", "strain": "strain=ATCC 49725", "accession": "GCA_000159115.1", "taxid": 38284, "species_taxid": 38284, "relation_to_type": "type", "validated": true, "ani": 77.4319, "matched_fragments": 107, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium oculi", "strain": "strain=NML 130210", "accession": "GCA_001412105.1", "taxid": 1544416, "species_taxid": 1544416, "relation_to_type": "type", "validated": true, "ani": 77.2611, "matched_fragments": 104, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.54, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002563965.1", "gtdb_species": "s__Corynebacterium renale", "ani": 99.9996, "matched_fragments": 777, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.02", "min_intra_species_ani": "98.07", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.94", "num_clustered_genomes": 5, "status": "conclusive" }, { "accession": "GCF_900187135.1", "gtdb_species": "s__Corynebacterium ulcerans", "ani": 79.2646, "matched_fragments": 70, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.24", "min_intra_species_ani": "95.82", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.95", "num_clustered_genomes": 38, "status": "-" }, { "accession": "GCF_002355155.1", "gtdb_species": "s__Corynebacterium suranareeae", "ani": 78.9377, "matched_fragments": 96, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000344785.1", "gtdb_species": "s__Corynebacterium callunae", "ani": 78.7514, "matched_fragments": 93, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000550805.1", "gtdb_species": "s__Corynebacterium vitaeruminis", "ani": 78.4725, "matched_fragments": 144, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.86", "min_intra_species_ani": "98.60", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000819445.1", "gtdb_species": "s__Corynebacterium humireducens", "ani": 78.3563, "matched_fragments": 158, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.80", "min_intra_species_ani": "97.60", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000478175.1", "gtdb_species": "s__Corynebacterium sp000478175", "ani": 78.1874, "matched_fragments": 95, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.95", "min_intra_species_ani": "99.95", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.98", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000341345.1", "gtdb_species": "s__Corynebacterium halotolerans", "ani": 78.041, "matched_fragments": 163, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000835165.1", "gtdb_species": "s__Corynebacterium marinum", "ani": 78.0373, "matched_fragments": 159, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.21", "min_intra_species_ani": "98.42", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_004382825.2", "gtdb_species": "s__Corynebacterium silvaticum", "ani": 77.9441, "matched_fragments": 68, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.94", "min_intra_species_ani": "99.78", "mean_intra_species_af": "1.00", "min_intra_species_af": "0.99", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_000159135.1", "gtdb_species": "s__Corynebacterium striatum", "ani": 77.8747, "matched_fragments": 123, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.44", "min_intra_species_ani": "95.19", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.85", "num_clustered_genomes": 41, "status": "-" }, { "accession": "GCF_001941485.1", "gtdb_species": "s__Corynebacterium frankenforstense", "ani": 77.8721, "matched_fragments": 185, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015752125.1", "gtdb_species": "s__Corynebacterium aquatimens", "ani": 77.6603, "matched_fragments": 88, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_900618065.1", "gtdb_species": "s__Corynebacterium sp900618065", "ani": 77.6302, "matched_fragments": 116, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001806875.1", "gtdb_species": "s__Corynebacterium sp001806875", "ani": 77.5074, "matched_fragments": 86, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000159115.1", "gtdb_species": "s__Corynebacterium accolens", "ani": 77.4319, "matched_fragments": 107, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.20", "min_intra_species_ani": "96.99", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.94", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCF_000375365.1", "gtdb_species": "s__Corynebacterium mastitidis", "ani": 77.3958, "matched_fragments": 130, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.64", "min_intra_species_ani": "96.64", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000379425.1", "gtdb_species": "s__Corynebacterium lubricantis", "ani": 77.3747, "matched_fragments": 112, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001412105.1", "gtdb_species": "s__Corynebacterium oculi", "ani": 77.2862, "matched_fragments": 103, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_012838985.1", "gtdb_species": "s__Corynebacterium sp012838985", "ani": 76.8708, "matched_fragments": 125, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019114925.1", "gtdb_species": "s__Corynebacterium faecipullorum", "ani": 76.4509, "matched_fragments": 86, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }