{ "type": "genome", "identifier": "GCF_900499075.1", "organism": "Roseibaca ekhonensis", "title": "Roseibaca ekhonensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "UVEG", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900499075.1", "bioproject": "PRJNA224116", "biosample": "SAMEA4809481", "wgs_master": "UIHC00000000.1", "refseq_category": "reference genome", "taxid": "254356", "species_taxid": "254356", "organism_name": "Roseibaca ekhonensis", "infraspecific_name": "strain=CECT 7235", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/10/05", "asm_name": "R.ekhonensisCECT7235_Spades_Prokka", "asm_submitter": "UVEG", "gbrs_paired_asm": "GCA_900499075.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/499/075/GCF_900499075.1_R.ekhonensisCECT7235_Spades_Prokka", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3901528", "genome_size_ungapped": "3901528", "gc_percent": "61.500000", "replicon_count": "0", "scaffold_count": "196", "contig_count": "196", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900499075.1-RS_2024_08_20", "annotation_date": "2024-08-20", "total_gene_count": "3979", "protein_coding_gene_count": "3819", "non_coding_gene_count": "51", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-10-05", "dateModified": "2018-10-05", "datePublished": "2018-10-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Roseibaca ekhonensis" ], "sample_taxid": [ "254356" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Antarctica" ], 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"status": "conclusive" }, { "organism_name": "Roseinatronobacter thiooxidans", "strain": "strain=ALG1", "accession": "GCA_001870675.1", "taxid": 121821, "species_taxid": 121821, "relation_to_type": "type", "validated": true, "ani": 78.8782, "matched_fragments": 453, "total_fragments": 1203, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseinatronobacter thiooxidans", "strain": "strain=DSM 13087", "accession": "GCA_003254005.1", "taxid": 121821, "species_taxid": 121821, "relation_to_type": "type", "validated": true, "ani": 78.8386, "matched_fragments": 455, "total_fragments": 1203, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseicitreum antarcticum", "strain": "strain=CGMCC 1.8894", "accession": "GCA_900107025.1", "taxid": 564137, "species_taxid": 564137, "relation_to_type": "type", "validated": true, "ani": 78.8063, "matched_fragments": 330, "total_fragments": 1203, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseicitreum antarcticum", "strain": "strain=ZS2-28", "accession": "GCA_014681765.1", "taxid": 564137, "species_taxid": 564137, "relation_to_type": "type", "validated": true, "ani": 78.7943, "matched_fragments": 343, "total_fragments": 1203, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobaca barguzinensis", "strain": "strain=alga05", "accession": "GCA_001870665.2", "taxid": 441209, "species_taxid": 441209, "relation_to_type": "suspected-type", "validated": true, "ani": 78.3237, "matched_fragments": 418, "total_fragments": 1203, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobaca bogoriensis", "strain": "strain=LBB1", "accession": "GCA_014197665.1", "taxid": 119542, "species_taxid": 119542, "relation_to_type": "suspected-type", "validated": true, "ani": 78.2959, "matched_fragments": 418, "total_fragments": 1203, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobaca barguzinensis", "strain": "strain=DSM 19920", "accession": "GCA_004365885.1", "taxid": 441209, "species_taxid": 441209, "relation_to_type": "suspected-type", "validated": true, "ani": 78.2443, "matched_fragments": 409, "total_fragments": 1203, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobaca bogoriensis", "strain": "strain=DSM 18756", "accession": "GCA_004366635.1", "taxid": 119542, "species_taxid": 119542, "relation_to_type": "suspected-type", "validated": true, "ani": 78.225, "matched_fragments": 414, "total_fragments": 1203, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhabdonatronobacter sediminivivens", "strain": "strain=IM2376", "accession": "GCA_013415485.1", "taxid": 2743469, "species_taxid": 2743469, "relation_to_type": "type", "validated": true, "ani": 78.1342, "matched_fragments": 364, "total_fragments": 1203, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cereibacter ovatus", "strain": "strain=JA234", 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"validated": true, "ani": 77.4144, "matched_fragments": 275, "total_fragments": 1203, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aestuariivita boseongensis", "strain": "strain=BS-B2", "accession": "GCA_001262635.1", "taxid": 1470562, "species_taxid": 1470562, "relation_to_type": "type", "validated": true, "ani": 76.9303, "matched_fragments": 222, "total_fragments": 1203, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodophyticola porphyridii", "strain": "strain=MA-7-27", "accession": "GCA_003688285.1", "taxid": 1852017, "species_taxid": 1852017, "relation_to_type": "type", "validated": true, "ani": 76.9159, "matched_fragments": 183, "total_fragments": 1203, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudogemmobacter hezensis", "strain": "strain=D13-10-4-6", "accession": "GCA_013155295.1", "taxid": 2737662, "species_taxid": 2737662, "relation_to_type": "type", "validated": true, "ani": 76.5919, 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