{ "type": "genome", "identifier": "GCF_900625075.1", "organism": "Pseudomonas tolaasii", "title": "Pseudomonas tolaasii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "CEBITEC", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900625075.1", "bioproject": "PRJNA224116", "biosample": "SAMEA5131111", "wgs_master": "UYXX00000000.1", "refseq_category": "na", "taxid": "29442", "species_taxid": "29442", "organism_name": "Pseudomonas tolaasii", "infraspecific_name": "na", "isolate": "DSM_19342T", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/01/29", "asm_name": "DSM_19342T", "asm_submitter": "CEBITEC", "gbrs_paired_asm": "GCA_900625075.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/625/075/GCF_900625075.1_DSM_19342T", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6752154", "genome_size_ungapped": "6752154", "gc_percent": "60.500000", "replicon_count": "0", "scaffold_count": "46", "contig_count": "46", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900625075.1-RS_2024_04_10", "annotation_date": "2024-04-10", "total_gene_count": "6150", "protein_coding_gene_count": "6005", "non_coding_gene_count": "71", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-01-29", "dateModified": "2019-01-29", "datePublished": "2019-01-29", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas tolaasii" ], "sample_taxid": [ "29442" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany" ], "sample_host_location_id": [], "data_size": "1.886 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "6752154", "Number of Sequences": "46", "Longest Sequences (bp)": "980200", "N50 (bp)": "463584", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "60.6", "Number of CDSs": "6062", "Average Protein Length": "326.6", "Coding Ratio (%)": "88.0", "Number of rRNAs": "8", "Number of tRNAs": "60", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Pseudomonas tolaasii", "strain": "", "accession": "GCA_900625075.1", "taxid": 29442, "species_taxid": 29442, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2227, "total_fragments": 2229, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudomonas tolaasii", "strain": "strain=NCPPB 2192", "accession": "GCA_002813445.1", "taxid": 29442, "species_taxid": 29442, "relation_to_type": "type", "validated": true, "ani": 99.9994, "matched_fragments": 2228, "total_fragments": 2229, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudomonas tolaasii", "strain": "strain=CCUG 23369", "accession": "GCA_008801395.1", "taxid": 29442, "species_taxid": 29442, "relation_to_type": "type", "validated": true, "ani": 99.9957, "matched_fragments": 2215, "total_fragments": 2229, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudomonas azotoformans", "strain": "strain=NBRC 12693", "accession": "GCA_002091515.1", "taxid": 47878, "species_taxid": 47878, "relation_to_type": "suspected-type", "validated": true, "ani": 88.351, "matched_fragments": 1632, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas azotoformans", "strain": "", "accession": "GCA_900624915.1", "taxid": 47878, "species_taxid": 47878, "relation_to_type": "suspected-type", "validated": true, "ani": 88.3143, "matched_fragments": 1645, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas fluorescens", "strain": "strain=NBRC 14160", "accession": "GCA_002091595.1", "taxid": 294, "species_taxid": 294, "relation_to_type": "suspected-type", "validated": true, "ani": 88.2557, "matched_fragments": 1620, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas extremorientalis", "strain": "", "accession": "GCA_900625005.1", "taxid": 169669, "species_taxid": 169669, "relation_to_type": "type", "validated": true, "ani": 88.2209, "matched_fragments": 1616, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas pergaminensis", "strain": "strain=1008", "accession": "GCA_024112395.1", "taxid": 2853159, "species_taxid": 2853159, "relation_to_type": "type", "validated": true, "ani": 88.2203, "matched_fragments": 1664, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas fluorescens", "strain": "strain=DSM 50090", "accession": "GCA_007858165.1", "taxid": 294, "species_taxid": 294, "relation_to_type": "suspected-type", "validated": true, "ani": 88.1639, "matched_fragments": 1648, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas canadensis", "strain": "strain=2-92", "accession": "GCA_000503215.1", "taxid": 915099, "species_taxid": 915099, "relation_to_type": "type", "validated": true, "ani": 88.0947, "matched_fragments": 1656, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas marginalis", "strain": "strain=DSM 13124", "accession": "GCA_007858155.1", "taxid": 298, "species_taxid": 298, "relation_to_type": "suspected-type", "validated": true, "ani": 88.0261, "matched_fragments": 1547, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas simiae", "strain": "strain=CCUG 50988", "accession": "GCA_900111895.1", "taxid": 321846, "species_taxid": 321846, "relation_to_type": "type", "validated": true, "ani": 88.0129, "matched_fragments": 1590, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas simiae", "strain": "strain=CCUG 50988", "accession": "GCA_001730615.1", "taxid": 321846, "species_taxid": 321846, "relation_to_type": "type", "validated": true, "ani": 87.9819, "matched_fragments": 1593, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lurida", "strain": "strain=LMG 21995", "accession": "GCA_002563895.1", "taxid": 244566, "species_taxid": 244566, "relation_to_type": "type", "validated": true, "ani": 87.9626, "matched_fragments": 1614, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas nabeulensis", "strain": "strain=E10B", "accession": "GCA_004682045.1", "taxid": 2293833, "species_taxid": 2293833, "relation_to_type": "type", "validated": true, "ani": 87.9533, "matched_fragments": 1530, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas kairouanensis", "strain": "strain=KC12", "accession": "GCA_004682055.1", "taxid": 2293832, "species_taxid": 2293832, "relation_to_type": "type", "validated": true, "ani": 87.8691, "matched_fragments": 1496, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas asgharzadehiana", "strain": "strain=SWRI132", "accession": "GCA_019139815.1", "taxid": 2842349, "species_taxid": 2842349, "relation_to_type": "type", "validated": true, "ani": 87.5962, "matched_fragments": 1473, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas spelaei", "strain": "strain=CCM 7893", "accession": "GCA_009724245.1", "taxid": 1055469, "species_taxid": 1055469, "relation_to_type": "type", "validated": true, "ani": 85.9354, "matched_fragments": 1498, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas karstica", "strain": "strain=CCM 7891", "accession": "GCA_009707515.1", "taxid": 1055468, "species_taxid": 1055468, "relation_to_type": "type", "validated": true, "ani": 85.0269, "matched_fragments": 1335, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002813445.1", "gtdb_species": "s__Pseudomonas_E tolaasii", "ani": 99.9994, "matched_fragments": 2228, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.61", "min_intra_species_ani": "99.17", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.93", "num_clustered_genomes": 14, "status": "conclusive" }, { "accession": "GCF_002022275.1", "gtdb_species": "s__Pseudomonas_E fluorescens_AJ", "ani": 90.13, "matched_fragments": 1815, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013386585.1", "gtdb_species": "s__Pseudomonas_E sp013386585", "ani": 89.1114, "matched_fragments": 1771, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013385985.1", "gtdb_species": "s__Pseudomonas_E sp013385985", "ani": 89.0286, "matched_fragments": 1754, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003097075.1", "gtdb_species": "s__Pseudomonas_E sp003097075", "ani": 88.5701, "matched_fragments": 1577, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.77", "min_intra_species_ani": "98.77", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_005938045.2", "gtdb_species": "s__Pseudomonas_E sp005938045", "ani": 88.5589, "matched_fragments": 1722, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.18", "min_intra_species_ani": "95.16", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000612585.1", "gtdb_species": "s__Pseudomonas_E sp000612585", "ani": 88.5031, "matched_fragments": 1615, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013385965.1", "gtdb_species": "s__Pseudomonas_E edaphica", "ani": 88.4701, "matched_fragments": 1678, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.04", "min_intra_species_ani": "98.93", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.92", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_003852315.1", "gtdb_species": "s__Pseudomonas_E sp003014915", "ani": 88.4415, "matched_fragments": 1736, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.48", "min_intra_species_ani": "96.20", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.91", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCF_900103345.1", "gtdb_species": "s__Pseudomonas_E azotoformans", "ani": 88.3131, "matched_fragments": 1632, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.97", "min_intra_species_ani": "95.87", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.87", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_013385825.1", "gtdb_species": "s__Pseudomonas_E reactans", "ani": 88.2911, "matched_fragments": 1656, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.45", "min_intra_species_ani": "96.30", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.87", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_001647715.1", "gtdb_species": "s__Pseudomonas_E antarctica_A", "ani": 88.2438, "matched_fragments": 1698, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.45", "min_intra_species_ani": "97.45", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001870465.1", "gtdb_species": "s__Pseudomonas_E extremorientalis", "ani": 88.2239, "matched_fragments": 1605, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.37", "min_intra_species_ani": "98.13", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.89", "num_clustered_genomes": 29, "status": "-" }, { "accession": "GCF_900215245.1", "gtdb_species": "s__Pseudomonas_E fluorescens", "ani": 88.1135, "matched_fragments": 1650, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.68", "min_intra_species_ani": "99.25", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.92", "num_clustered_genomes": 14, "status": "-" }, { "accession": "GCF_000503215.1", "gtdb_species": "s__Pseudomonas_E canadensis", "ani": 88.0981, "matched_fragments": 1656, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.83", "min_intra_species_ani": "97.74", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCF_900111895.1", "gtdb_species": "s__Pseudomonas_E simiae", "ani": 88.0113, "matched_fragments": 1589, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.45", "min_intra_species_ani": "99.32", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.92", "num_clustered_genomes": 20, "status": "-" }, { "accession": "GCF_002563895.1", "gtdb_species": "s__Pseudomonas_E lurida", "ani": 87.9877, "matched_fragments": 1611, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.19", "min_intra_species_ani": "99.03", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 25, "status": "-" }, { "accession": "GCF_004682045.1", "gtdb_species": "s__Pseudomonas_E nabeulensis", "ani": 87.9822, "matched_fragments": 1526, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.61", "min_intra_species_ani": "95.59", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_004682055.1", "gtdb_species": "s__Pseudomonas_E kairouanensis", "ani": 87.8602, "matched_fragments": 1497, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009866765.1", "gtdb_species": "s__Pseudomonas_E sp009866765", "ani": 87.8115, "matched_fragments": 1517, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_019139815.1", "gtdb_species": "s__Pseudomonas_E sp900005815", "ani": 87.6004, "matched_fragments": 1472, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.55", "min_intra_species_ani": "99.31", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.92", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_001983175.1", "gtdb_species": "s__Pseudomonas_E cedrina", "ani": 87.5999, "matched_fragments": 1499, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.10", "min_intra_species_ani": "97.30", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.92", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_004519405.1", "gtdb_species": "s__Pseudomonas_E sp004519405", "ani": 87.3989, "matched_fragments": 1590, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.60", "min_intra_species_ani": "98.40", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.92", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_000263715.2", "gtdb_species": "s__Pseudomonas_E synxantha_A", "ani": 87.3218, "matched_fragments": 1550, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.66", "min_intra_species_ani": "97.33", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.88", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_002934065.1", "gtdb_species": "s__Pseudomonas_E orientalis_A", "ani": 87.2237, "matched_fragments": 1500, "total_fragments": 2229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.15", "min_intra_species_ani": "95.96", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.83", "num_clustered_genomes": 21, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.248, "cell_length": 0.186, "doubling_h": -0.025, "growth_tmp": 29.0, "optimum_tmp": 26.5, "optimum_ph": 7.258, "genome_size": 6779698.75, "gc_content": 60.99, "coding_genes": 5204.79, "rRNA16S_genes": 5.319, "tRNA_genes": 67.35, "gram_stain": 0.0, "sporulation": 0.0, "motility": 1.0, "range_salinity": 0.666, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": 0.926, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.073, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Pseudomonas", "tolaasii" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }