{ "type": "genome", "identifier": "GCF_900626155.1", "organism": "Anaerococcus vaginimassiliensis", "title": "Anaerococcus vaginimassiliensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "URMITE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900626155.1", "bioproject": "PRJNA224116", "biosample": "SAMEA5138500", "wgs_master": "UZAS00000000.1", "refseq_category": "reference genome", "taxid": "2042308", "species_taxid": "2042308", "organism_name": "Anaerococcus vaginimassiliensis", "infraspecific_name": "strain=Marseille-P4512", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/12/05", "asm_name": "PRJEB22908", "asm_submitter": "URMITE", "gbrs_paired_asm": "GCA_900626155.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/626/155/GCF_900626155.1_PRJEB22908", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "1836452", "genome_size_ungapped": "1836424", "gc_percent": "33.000000", "replicon_count": "0", "scaffold_count": "1", "contig_count": "2", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900626155.1-RS_2024_04_10", "annotation_date": "2024-04-10", "total_gene_count": "1831", "protein_coding_gene_count": "1741", "non_coding_gene_count": "64", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-12-05", "dateModified": "2018-12-05", "datePublished": "2018-12-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Anaerococcus vaginimassiliensis" ], "sample_taxid": [ "2042308" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], 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"ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Anaerococcus prevotii", "strain": "strain=NCTC11806", "accession": "GCA_900445285.1", "taxid": 33034, "species_taxid": 33034, "relation_to_type": "type", "validated": true, "ani": 82.2448, "matched_fragments": 311, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerococcus prevotii", "strain": "strain=DSM 20548", "accession": "GCA_000024105.1", "taxid": 33034, "species_taxid": 33034, "relation_to_type": "type", "validated": true, "ani": 82.2392, "matched_fragments": 315, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerococcus marasmi", "strain": "strain=Marseille-P3557", "accession": "GCA_900290195.1", "taxid": 2057797, "species_taxid": 2057797, "relation_to_type": "type", "validated": true, "ani": 82.1452, "matched_fragments": 324, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerococcus degeneri", "strain": "strain=FDAARGOS_1538", "accession": "GCA_020215685.1", "taxid": 361500, "species_taxid": 361500, "relation_to_type": "type", "validated": true, "ani": 81.2377, "matched_fragments": 155, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerococcus tetradius", "strain": "strain=ATCC 35098", "accession": "GCA_000159095.1", "taxid": 33036, "species_taxid": 33036, "relation_to_type": "type", "validated": true, "ani": 81.2229, "matched_fragments": 299, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerococcus ihuae", "strain": "strain=Marseille-Q5893", "accession": "GCA_928368155.1", "taxid": 2899519, "species_taxid": 2899519, "relation_to_type": "type", "validated": true, "ani": 81.1702, "matched_fragments": 154, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerococcus degeneri", "strain": 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81.2371, "matched_fragments": 299, "total_fragments": 612, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.20", "min_intra_species_ani": "98.20", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_017874475.1", "gtdb_species": "s__Anaerococcus degeneri", "ani": 80.9859, "matched_fragments": 153, "total_fragments": 612, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000156575.1", "gtdb_species": "s__Anaerococcus lactolyticus", "ani": 80.3818, "matched_fragments": 163, 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