# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_5	LOCUS_00040	sequence1:2239..3891(+)	partial			WP_011241757.1	MobQ family relaxase	58.9	47.4	36.9
MGA_6	LOCUS_00050	sequence1:3894..4427(+)	frameshift		4400	WP_000224680.1	phage replisome organizer N-terminal domain-containing protein	94.9	66.7	58.3
MGA_7	LOCUS_00060	sequence1:4460..4645(+)	partial			WP_045000370.1	replication initiator protein A	100.0	23.6	49.2
MGA_9	LOCUS_00080	sequence1:5164..6171(+)	partial			WP_005806119.1	ORF6N domain-containing protein	35.2	59.0	50.8
MGA_10	LOCUS_00090	sequence1:6281..6466(+)	partial			WP_201275746.1	transposon-encoded TnpW family protein	91.8	69.0	63.8
MGA_11	LOCUS_00100	sequence1:6568..7293(+)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	99.2	40.2	92.5
MGA_13	LOCUS_00120	sequence1:7901..8047(+)	partial			WP_201275746.1	transposon-encoded TnpW family protein	100.0	57.1	68.8
MGA_25	LOCUS_00240	sequence1:17254..18837(+)	partial			WP_012583974.1	SMC family ATPase	42.7	24.7	24.3
MGA_26	LOCUS_00250	sequence1:18852..19712(+)	partial			WP_011860790.1	DUF4366 domain-containing protein	53.1	30.0	40.3
MGA_30	LOCUS_00290	sequence1:23336..24079(+)	partial			WP_010964535.1	DNA cytosine methyltransferase	98.0	73.9	49.6
MGA_31	LOCUS_00300	sequence1:24081..30377(+)	partial			WP_011861367.1	DEAD/DEAH box helicase family protein	80.1	55.5	63.9
MGA_33	LOCUS_00320	sequence1:32737..34065(+)	partial			WP_011860792.1	DEAD/DEAH box helicase family protein	95.7	14.8	67.7
MGA_47	LOCUS_00460	sequence1:47320..48201(+)	partial			WP_001044441.1	M23 family metallopeptidase	59.0	58.8	39.3
MGA_48	LOCUS_00470	sequence1:48591..48791(+)	partial			WP_003562727.1	PLD nuclease N-terminal domain-containing protein	78.8	73.2	59.6
MGA_72	LOCUS_00710	sequence1:73135..77802(+)	partial			WP_001071181.1	SNF2-related protein	100.0	68.4	98.5
MGA_80	LOCUS_00790	sequence1:81348..81566(-)	partial			WP_001072463.1	DUF5960 family protein	93.1	65.7	98.5
MGA_86	LOCUS_00850	sequence1:85658..85870(+)	partial			WP_000826560.1	ACR3 family arsenite efflux transporter	95.7	19.4	76.1
MGA_87	LOCUS_00860	sequence1:85891..87048(+)	partial			WP_002287759.1	FAD-dependent oxidoreductase	92.5	65.5	38.8
MGA_88	LOCUS_00870	sequence1:86996..87793(-)	frameshift		87891	WP_120719018.1	IS3 family transposase	99.2	58.6	72.2
MGA_90	LOCUS_00890	sequence1:88369..89001(+)	partial			WP_011122081.1	FAD-dependent oxidoreductase	83.8	30.9	42.2
MGA_93	LOCUS_00920	sequence1:91102..91332(-)	partial			WP_011861112.1	CHAP domain-containing protein	93.4	11.1	49.3
MGA_98	LOCUS_00970	sequence1:95731..97200(+)	partial			WP_010922095.1	glucosaminidase domain-containing protein	27.0	31.5	33.1
MGA_100	LOCUS_00990	sequence1:97664..98497(+)	partial			WP_000301254.1	recombinase family protein	86.6	47.8	30.0
MGA_105	LOCUS_01040	sequence1:101956..102432(+)	frameshift,internal_stop_codon	102499..102501(+)	102417	WP_010714164.1	heavy metal translocating P-type ATPase	96.2	18.4	77.0
MGA_110	LOCUS_01090	sequence1:107236..107502(+)	frameshift		107143	WP_000592531.1	metalloregulator ArsR/SmtB family transcription factor	100.0	72.1	98.9
MGA_112	LOCUS_01110	sequence1:109899..110240(-)	partial			WP_115283723.1	IS3 family transposase	100.0	25.1	80.5
MGA_127	LOCUS_01260	sequence1:124684..127668(+)	partial			WP_000503026.1	non-ribosomal peptide synthetase	56.7	26.8	28.8
MGA_130	LOCUS_01290	sequence1:130844..131149(+)	frameshift		130739	WP_011922621.1	energy-coupling factor transporter transmembrane component T	95.0	45.2	33.0
MGA_135	LOCUS_01340	sequence1:136819..137400(+)	partial			WP_010956720.1	TetR/AcrR family transcriptional regulator	68.4	63.9	39.1
MGA_153	LOCUS_01520	sequence1:154499..159007(+)	partial			WP_012775357.1	S8 family serine peptidase	60.6	53.2	29.9
MGA_159	LOCUS_01580	sequence1:164291..164755(+)	partial			WP_012582699.1	auxin efflux carrier	97.4	47.3	26.0
MGA_205	LOCUS_02040	sequence1:210444..211727(+)	partial			WP_003547453.1	ferric reductase	49.9	77.9	30.7
MGA_209	LOCUS_02080	sequence1:214896..215318(+)	partial			WP_011948039.1	cupin domain-containing protein	93.6	59.8	55.0
MGA_325	LOCUS_03240	sequence1:337723..338943(-)	partial			WP_008766017.1	O-antigen polymerase	66.3	68.1	25.2
MGA_328	LOCUS_03270	sequence1:340669..341595(-)	partial			WP_011461015.1	FdtA/QdtA family cupin domain-containing protein	36.7	81.9	46.9
MGA_330	LOCUS_03290	sequence1:342685..343926(-)	partial			WP_008767224.1	glycosyltransferase family 4 protein	66.8	68.9	25.5
MGA_356	LOCUS_03550	sequence1:370881..372065(-)	partial			WP_099262573.1	alpha/beta hydrolase	54.3	58.5	26.3
MGA_372	LOCUS_03710	sequence1:389598..390131(-)	internal_stop_codon	389598..389600(-)		WP_010922252.1	type II-A CRISPR-associated protein Csn2	100.0	80.5	67.2
MGA_386	LOCUS_03850	sequence1:405403..406938(-)	partial			WP_000682781.1	G5 domain-containing protein	68.3	8.1	25.8
MGA_402	LOCUS_04010	sequence1:425543..425896(+)	partial			WP_002982409.1	quorum-sensing system transcriptional regulator RopB/Rgg1	49.6	20.7	94.8
MGA_410	LOCUS_04090	sequence1:435163..435603(-)	partial			WP_001132444.1	replication initiator protein A	67.8	29.9	47.5
MGA_413	LOCUS_04120	sequence1:436417..436923(-)	partial			WP_000282761.1	helix-turn-helix transcriptional regulator	58.3	58.9	57.0
MGA_415	LOCUS_04140	sequence1:437169..437342(-)	partial			WP_011815656.1	DUF3850 domain-containing protein	71.9	18.5	65.9
MGA_429	LOCUS_04280	sequence1:448282..448767(-)	partial			WP_002262348.1	hypothetical protein	87.6	23.0	43.4
MGA_436	LOCUS_04350	sequence1:453784..454179(-)	frameshift		454250	WP_002904720.1	ZIP family manganese transporter TmpA	100.0	47.4	72.5
MGA_437	LOCUS_04360	sequence1:454221..454604(-)	frameshift		454250	WP_002904720.1	ZIP family manganese transporter TmpA	96.1	44.2	68.9
MGA_465	LOCUS_04640	sequence1:486235..487203(+)	internal_stop_codon	487201..487203(+)		WP_002261956.1	ATP-binding cassette domain-containing protein	100.0	64.3	45.3
MGA_466	LOCUS_04650	sequence1:487357..487728(+)	internal_stop_codon	487201..487203(+)		WP_002261956.1	ATP-binding cassette domain-containing protein	100.0	24.8	60.5
MGA_468	LOCUS_04670	sequence1:488597..488770(-)	partial			WP_002984154.1	hypothetical protein	54.4	59.6	100.0
MGA_471	LOCUS_04700	sequence1:491865..492788(+)	partial			WP_002682345.1	CorA family divalent cation transporter	68.7	68.7	32.4
MGA_486	LOCUS_04850	sequence1:503023..503217(-)	partial			WP_000132300.1	hypothetical protein	67.2	12.1	76.7
MGA_500	LOCUS_04990	sequence1:517885..519234(-)	partial			WP_011860792.1	DEAD/DEAH box helicase family protein	100.0	15.4	89.3
MGA_514	LOCUS_05130	sequence1:540954..541676(-)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	100.0	40.4	100.0
MGA_515	LOCUS_05140	sequence1:541778..541963(-)	partial			WP_201275746.1	transposon-encoded TnpW family protein	91.8	69.0	63.8
MGA_516	LOCUS_05150	sequence1:542073..543080(-)	partial			WP_005806119.1	ORF6N domain-containing protein	35.2	59.0	50.8
MGA_519	LOCUS_05180	sequence1:544354..546006(-)	partial			WP_011241757.1	MobQ family relaxase	58.9	47.4	36.9
MGA_530	LOCUS_05290	sequence1:556833..557876(-)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	94.8	55.4	91.2
MGA_535	LOCUS_05340	sequence1:560863..561153(-)	partial			WP_000914581.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	100.0	17.7	92.7
MGA_545	LOCUS_05440	sequence1:571965..572555(-)	partial			WP_010956720.1	TetR/AcrR family transcriptional regulator	65.8	62.5	33.8
MGA_548	LOCUS_05470	sequence1:574626..574973(-)	partial			WP_011860729.1	ABC transporter permease	100.0	44.7	36.5
MGA_552	LOCUS_05510	sequence1:578697..579674(-)	partial			WP_011860822.1	HAMP domain-containing sensor histidine kinase	76.3	64.1	34.1
MGA_553	LOCUS_05520	sequence1:579667..579966(-)	partial			WP_003434705.1	response regulator transcription factor	98.0	43.6	46.4
MGA_560	LOCUS_05590	sequence1:584963..585193(+)	partial			WP_000506270.1	conjugal transfer protein	100.0	45.2	100.0
MGA_571	LOCUS_05700	sequence1:598005..598364(-)	partial			WP_003434705.1	response regulator transcription factor	95.8	51.8	48.2
MGA_572	LOCUS_05710	sequence1:598440..598616(-)	partial			WP_009888178.1	HAMP domain-containing sensor histidine kinase	86.2	16.3	48.0
MGA_575	LOCUS_05740	sequence1:599816..601165(-)	partial			WP_011861367.1	DEAD/DEAH box helicase family protein	100.0	15.0	92.0
MGA_577	LOCUS_05760	sequence1:603525..604388(-)	frameshift		604419	WP_011860792.1	DEAD/DEAH box helicase family protein	97.9	9.7	96.1
MGA_578	LOCUS_05770	sequence1:604399..610869(-)	frameshift		604419	WP_011860792.1	DEAD/DEAH box helicase family protein	99.7	74.0	87.7
MGA_642	LOCUS_06410	sequence1:682813..683859(-)	partial			WP_011836681.1	serine hydrolase	83.0	74.9	68.9
MGA_653	LOCUS_06520	sequence1:697296..697700(-)	partial			WP_029714299.1	TIGR02206 family membrane protein	89.6	51.9	52.5
MGA_738	LOCUS_07370	sequence1:790928..791131(-)	internal_stop_codon	791207..791209(-),790928..790930(-),790916..790918(-)		WP_012775157.1	IS200/IS605-like element ISSsu4 family transposase	100.0	43.5	95.5
MGA_741	LOCUS_07400	sequence1:794897..795085(-)	internal_stop_codon	794897..794899(-),795098..795100(-)		WP_003055970.1	GNAT family protein	100.0	31.6	69.4
MGA_742	LOCUS_07410	sequence1:795098..795421(-)	internal_stop_codon	794897..794899(-),795098..795100(-)		WP_003055970.1	GNAT family protein	95.3	52.0	75.5
MGA_752	LOCUS_07510	sequence1:807956..808333(-)	partial			WP_002897353.1	GNAT family N-acetyltransferase	96.8	41.6	37.7
MGA_771	LOCUS_07690	sequence1:838913..842092(-)	partial			WP_000610237.1	MSCRAMM family adhesin SdrE	42.7	40.8	43.3
MGA_776	LOCUS_07740	sequence1:847971..848972(-)	partial			WP_002437878.1	accessory Sec system protein Asp3	46.2	82.1	35.7
MGA_796	LOCUS_07940	sequence1:870744..871790(-)	partial			WP_010867262.1	serine hydrolase	81.9	62.9	25.6
MGA_798	LOCUS_07960	sequence1:872730..873257(-)	frameshift		873255	WP_003420702.1	butyrate kinase	94.9	47.4	43.5
MGA_799	LOCUS_07970	sequence1:873223..873801(-)	frameshift		873252	WP_004454677.1	butyrate kinase	95.3	51.4	47.0
MGA_800	LOCUS_07980	sequence1:873811..874728(-)	partial			WP_003594496.1	phosphate acyltransferase	70.5	76.0	42.8
MGA_809	LOCUS_08070	sequence1:884010..884456(-)	partial			WP_002469559.1	antiholin-like murein hydrolase modulator LrgA	75.0	74.5	58.6
MGA_827	LOCUS_08240	sequence1:907304..907879(-)	internal_stop_codon	907304..907306(-)		WP_000124748.1	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	100.0	81.7	47.4
MGA_832	LOCUS_08290	sequence1:911709..912095(+)	partial			WP_010706477.1	hypothetical protein	50.0	50.0	46.9
MGA_838	LOCUS_08350	sequence1:916001..916426(-)	partial			WP_010922668.1	hypothetical protein	67.4	37.4	29.3
MGA_855	LOCUS_08520	sequence1:933019..934209(-)	frameshift		934229	WP_010922680.1	PolC-type DNA polymerase III	100.0	27.0	93.2
MGA_856	LOCUS_08530	sequence1:934104..937418(-)	frameshift		934235	WP_010922680.1	PolC-type DNA polymerase III	96.6	72.7	86.1
MGA_891	LOCUS_08880	sequence1:980183..980731(+)	internal_stop_codon	980174..980176(+)		WP_184006649.1	IS1182 family transposase	85.7	32.5	75.6
MGA_893	LOCUS_08900	sequence1:981331..981936(-)	partial			WP_010905736.1	hypothetical protein	81.6	60.9	27.9
MGA_896	LOCUS_08930	sequence1:985877..986182(-)	internal_stop_codon	986201..986203(-)		WP_000696089.1	MepB family protein	97.0	67.6	61.2
MGA_921	LOCUS_09180	sequence1:1017324..1017620(+)	partial			WP_010922720.1	cysteine proteinase exotoxin SpeB	95.9	25.1	34.3
MGA_932	LOCUS_09290	sequence1:1031047..1035357(-)	partial			WP_011837258.1	isopeptide-forming domain-containing fimbrial protein	21.0	65.8	25.9
MGA_934	LOCUS_09310	sequence1:1035931..1036185(-)	partial			WP_004194478.1	hypothetical protein	57.1	55.8	50.0
MGA_938	LOCUS_09350	sequence1:1040970..1042574(+)	partial			WP_012027720.1	transglutaminase domain-containing protein	98.7	47.4	51.4
MGA_968	LOCUS_09650	sequence1:1070189..1070530(-)	partial			WP_010865177.1	cupin domain-containing protein	79.6	56.2	34.3
MGA_1019	LOCUS_10160	sequence1:1118733..1119071(-)	partial			WP_002986548.1	competence type IV pilus minor pilin ComGD	94.6	74.6	45.3
MGA_1020	LOCUS_10170	sequence1:1119259..1119447(-)	internal_stop_codon	1119259..1119261(-)		WP_000738641.1	comG operon protein ComGC	100.0	57.9	53.2
MGA_1044	LOCUS_10410	sequence1:1151093..1151614(+)	partial			WP_002983552.1	PepSY domain-containing protein	39.3	45.3	51.5
MGA_1045	LOCUS_10420	sequence1:1152304..1152474(-)	frameshift		1152497,1152317	WP_000057440.1	IS200/IS605 family transposase	94.6	34.4	94.3
MGA_1046	LOCUS_10430	sequence1:1152489..1152707(-)	frameshift		1152497,1152317	WP_000057438.1	IS200/IS605 family transposase	98.6	46.1	91.5
MGA_1108	LOCUS_11020	sequence1:1227226..1227633(-)	partial			WP_001054128.1	helix-turn-helix transcriptional regulator	46.7	33.3	55.6
MGA_1146	LOCUS_11400	sequence1:1268206..1269051(-)	partial			WP_010922783.1	DUF4097 family beta strand repeat-containing protein	92.5	69.1	23.9
MGA_1175	LOCUS_11690	sequence1:1300444..1300716(+)	partial			WP_002982188.1	transcriptional regulator Spx	100.0	68.2	95.6
MGA_1232	LOCUS_12260	sequence1:1364626..1365117(+)	internal_stop_codon	1365115..1365117(+)		WP_002362274.1	diacylglycerol kinase family lipid kinase	100.0	54.3	62.6
MGA_1233	LOCUS_12270	sequence1:1365160..1365513(+)	internal_stop_codon	1365115..1365117(+)		WP_002362274.1	diacylglycerol kinase family lipid kinase	94.0	37.0	50.5
MGA_1265	LOCUS_12590	sequence1:1396620..1396811(+)	frameshift,internal_stop_codon	1396895..1396897(+)	1396797,1396599	WP_184006649.1	IS1182 family transposase	93.7	12.3	78.0
MGA_1266	LOCUS_12600	sequence1:1396906..1397832(+)	frameshift,internal_stop_codon	1396894..1396896(+)	1396796	WP_076996129.1	IS1182 family transposase	100.0	64.2	68.5
MGA_1271	LOCUS_12650	sequence1:1400408..1400779(-)	partial			WP_000173130.1	hypothetical protein	67.5	47.7	46.4
MGA_1278	LOCUS_12720	sequence1:1402882..1403049(-)	internal_stop_codon	1402882..1402884(-),1403083..1403085(-)		WP_000424672.1	Rha family transcriptional regulator	100.0	26.4	70.9
MGA_1279	LOCUS_12730	sequence1:1403083..1403253(-)	internal_stop_codon	1402882..1402884(-),1403083..1403085(-)		WP_000424672.1	Rha family transcriptional regulator	91.1	24.5	60.8
MGA_1281	LOCUS_12750	sequence1:1403617..1404165(+)	partial			WP_001080846.1	helix-turn-helix transcriptional regulator	47.3	61.7	59.8
MGA_1284	LOCUS_12780	sequence1:1406088..1406255(+)	frameshift		1406249	WP_054278179.1	site-specific integrase	98.2	14.2	51.9
MGA_1285	LOCUS_12790	sequence1:1406408..1406704(+)	frameshift		1406696,1406249	WP_054278179.1	site-specific integrase	98.0	25.2	45.8
MGA_1286	LOCUS_12800	sequence1:1406682..1407233(+)	frameshift		1406698	WP_054278179.1	site-specific integrase	98.9	48.6	67.6
MGA_1348	LOCUS_13420	sequence1:1472598..1473008(+)	internal_stop_codon	1472544..1472546(+)		WP_010774219.1	GNAT family N-acetyltransferase	99.3	77.5	47.8
MGA_1397	LOCUS_13910	sequence1:1521786..1522247(-)	partial			WP_012028596.1	thiol reductase thioredoxin	73.2	74.5	40.2
MGA_1398	LOCUS_13920	sequence1:1522244..1523218(-)	partial			WP_011014004.1	excalibur calcium-binding domain-containing protein	15.1	39.0	53.6
MGA_1464	LOCUS_14580	sequence1:1589488..1589712(+)	frameshift		1589703	WP_000057440.1	IS200/IS605 family transposase	98.6	46.1	91.8
MGA_1465	LOCUS_14590	sequence1:1589727..1589936(+)	frameshift		1589706	WP_029172398.1	IS200/IS605-like element ISSsu4 family transposase	100.0	49.4	85.5
MGA_1492	LOCUS_14860	sequence1:1612422..1613102(-)	partial			WP_003243950.1	minor protease Epr	58.4	20.6	32.1
MGA_1660	LOCUS_16530	sequence1:1789508..1791157(+)	partial			WP_002300997.1	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	93.4	59.4	40.9
MGA_1670	LOCUS_16630	sequence1:1799891..1800148(+)	partial			WP_000517852.1	cell wall synthase accessory phosphoprotein MacP	74.1	75.3	50.7
MGA_1695	LOCUS_16880	sequence1:1822320..1822802(-)	internal_stop_codon	1822845..1822847(-)		WP_116878224.1	IS982 family transposase	96.9	58.7	76.1
MGA_1697	LOCUS_16900	sequence1:1824435..1824869(-)	frameshift		1824476	WP_000645480.1	HXXEE domain-containing protein	88.9	76.6	49.2
MGA_1699	LOCUS_16920	sequence1:1825863..1826504(+)	frameshift		1825834	WP_100206281.1	IS982 family transposase	99.1	78.7	68.2
MGA_1700	LOCUS_16930	sequence1:1826665..1826901(+)	partial			WP_002262774.1	NUDIX hydrolase	67.9	34.0	71.7
MGA_1704	LOCUS_16970	sequence1:1829921..1830187(+)	partial			WP_001019932.1	response regulator transcription factor	100.0	39.2	38.8
MGA_1713	LOCUS_17060	sequence1:1836591..1836827(+)	partial			WP_002985700.1	preprotein translocase subunit SecG	74.4	74.4	82.8
MGA_1801	LOCUS_17940	sequence1:1928954..1929205(+)	partial			WP_000759944.1	DUF4430 domain-containing protein	89.2	60.5	51.3
MGA_1815	LOCUS_18080	sequence1:1947680..1948477(-)	frameshift		1948575	WP_120719018.1	IS3 family transposase	99.2	58.6	72.2
MGA_1821	LOCUS_18140	sequence1:1953552..1954358(+)	frameshift		1953294	WP_000351637.1	tRNA epoxyqueuosine(34) reductase QueG	99.3	71.7	79.1
MGA_1850	LOCUS_18430	sequence1:1983488..1983766(+)	partial			WP_002294234.1	chorismate mutase	89.1	29.3	46.3
MGA_1859	LOCUS_18520	sequence1:1994307..1994594(-)	frameshift		1994330	WP_000137373.1	YueI family protein	92.6	58.3	48.9
MGA_1889	LOCUS_18820	sequence1:2031130..2031306(+)	partial			WP_000048058.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1908	LOCUS_19010	sequence1:2049947..2051824(+)	partial			WP_011109429.1	C39 family peptidase	65.9	53.9	38.0
MGA_1996	LOCUS_19890	sequence1:2139855..2142098(+)	partial			WP_001071181.1	SNF2-related protein	95.3	31.3	98.5
MGA_1997	LOCUS_19900	sequence1:2142156..2143742(+)	partial			WP_011035595.1	hypothetical protein	29.9	57.0	34.2
MGA_2002	LOCUS_19950	sequence1:2146649..2147701(+)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	94.0	55.4	78.7
MGA_2008	LOCUS_20010	sequence1:2154575..2155537(+)	frameshift		2154461,2155454	WP_011986592.1	ABC transporter ATP-binding protein	94.1	59.5	41.5
MGA_2009	LOCUS_20020	sequence1:2155474..2155839(+)	frameshift		2155453	WP_002679275.1	energy-coupling factor ABC transporter ATP-binding protein	86.0	20.1	47.1
