{
    "type": "genome",
    "identifier": "GCF_900637305.1",
    "organism": "Cardiobacterium hominis",
    "title": "Cardiobacterium hominis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "SC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_900637305.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA4412685",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "2718",
        "species_taxid": "2718",
        "organism_name": "Cardiobacterium hominis",
        "infraspecific_name": "strain=NCTC10426",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2018/12/20",
        "asm_name": "50618_F02",
        "asm_submitter": "SC",
        "gbrs_paired_asm": "GCA_900637305.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/637/305/GCF_900637305.1_50618_F02",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2670755",
        "genome_size_ungapped": "2670755",
        "gc_percent": "59.000000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_900637305.1-RS_2024_10_11",
        "annotation_date": "2024-10-11",
        "total_gene_count": "2563",
        "protein_coding_gene_count": "2435",
        "non_coding_gene_count": "64",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2018-12-20",
    "dateModified": "2018-12-20",
    "datePublished": "2018-12-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Cardiobacterium hominis"
        ],
        "sample_taxid": [
            "2718"
        ],
        "sample_host_organism": [
            "not available"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [
            "disease"
        ],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.733 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.19,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2670755",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "2670755",
        "N50 (bp)": "2670755",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "59.2",
        "Number of CDSs": "2492",
        "Average Protein Length": "320.1",
        "Coding Ratio (%)": "89.6",
        "Number of rRNAs": "9",
        "Number of tRNAs": "53",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Cardiobacterium hominis",
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                "relation_to_type": "type",
                "validated": true,
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                "status": "conclusive"
            },
            {
                "organism_name": "Cardiobacterium hominis",
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Cardiobacterium valvarum",
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                "species_taxid": 194702,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halomonas sulfidoxydans",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thiobacillus denitrificans",
                "strain": "strain=DSM 12475",
                "accession": "GCA_000376425.1",
                "taxid": 36861,
                "species_taxid": 36861,
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                "ani": 76.7773,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lysobacter capsici",
                "strain": "strain=VKM B-2533",
                "accession": "GCA_014779555.2",
                "taxid": 435897,
                "species_taxid": 435897,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.808,
                "matched_fragments": 71,
                "total_fragments": 890,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Plasticicumulans lactativorans",
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                "accession": "GCA_004341245.1",
                "taxid": 1133106,
                "species_taxid": 1133106,
                "relation_to_type": "type",
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                "matched_fragments": 89,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Luteimonas weifangensis",
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                "accession": "GCA_003416885.1",
                "taxid": 2303539,
                "species_taxid": 2303539,
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arenimonas terrae",
                "strain": "strain=R29",
                "accession": "GCA_006265115.1",
                "taxid": 2546226,
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                "matched_fragments": 57,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas insulae",
                "strain": "strain=UL073",
                "accession": "GCA_016901015.1",
                "taxid": 2809017,
                "species_taxid": 2809017,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arenimonas metalli",
                "strain": "strain=CF5-1",
                "accession": "GCA_000747155.1",
                "taxid": 948077,
                "species_taxid": 948077,
                "relation_to_type": "type",
                "validated": true,
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                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
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        "gtdb_result": [
            {
                "accession": "GCF_900637305.1",
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                "ani": 100.0,
                "matched_fragments": 888,
                "total_fragments": 890,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cardiobacteriales;f__Cardiobacteriaceae;g__Cardiobacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.41",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cardiobacteriales;f__Cardiobacteriaceae;g__Cardiobacterium",
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            {
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Competibacterales;f__Competibacteraceae;g__Plasticicumulans_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Thiobacillaceae;g__Thiobacillus",
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                "num_clustered_genomes": 4,
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        ]
    },
    "_bac2feature": {
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        "facultative_respiration": 0.0,
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        "bacillus_cell_shape": null,
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    "_genome_taxon": [
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        "hominis"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}