{ "type": "genome", "identifier": "GCF_900637655.1", "organism": "Segatella oris", "title": "Segatella oris", "description": "na", "data type": "Genome sequencing and assembly", "organization": "SC", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900637655.1", "bioproject": "PRJNA224116", "biosample": "SAMEA4535752", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "28135", "species_taxid": "28135", "organism_name": "Segatella oris", "infraspecific_name": "strain=NCTC13071", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/12/20", "asm_name": "52295_B01", "asm_submitter": "SC", "gbrs_paired_asm": "GCA_900637655.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/637/655/GCF_900637655.1_52295_B01", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3168212", "genome_size_ungapped": "3168212", "gc_percent": "44.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900637655.1-RS_2025_01_08", "annotation_date": "2025-01-08", "total_gene_count": "2644", "protein_coding_gene_count": "2502", "non_coding_gene_count": "76", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-12-20", "dateModified": "2018-12-20", "datePublished": "2018-12-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Segatella oris" ], "sample_taxid": [ "28135" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [ "not available: to be reported later" ], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "0.900 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3168212", "Number of Sequences": "1", "Longest Sequences (bp)": "3168212", "N50 (bp)": "3168212", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "44.0", "Number of CDSs": "2545", "Average Protein Length": "349.3", "Coding Ratio (%)": "84.2", "Number of rRNAs": "15", "Number of tRNAs": "60", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Prevotella oris", "strain": "strain=NCTC13071", "accession": "GCA_900637655.1", "taxid": 28135, "species_taxid": 28135, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1053, "total_fragments": 1056, "ani_threshold": 95, "status": "conclusive" }, { 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