# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_5	LOCUS_00050	sequence01:3012..3302(-)	internal_stop_codon	3393..3395(-)		WP_001058993.1	ATP-dependent Clp protease ATP-binding subunit ClpL	80.2	12.7	39.3
MGA_9	LOCUS_00090	sequence01:5682..6128(+)	partial			WP_010965925.1	endopeptidase La	98.0	19.8	26.6
MGA_11	LOCUS_00110	sequence01:6513..7145(-)	frameshift,internal_stop_codon	7230..7232(-),7299..7301(-),7380..7382(-)	6515	WP_011017027.1	methionine--tRNA ligase	100.0	34.1	32.6
MGA_21	LOCUS_00210	sequence03:818..1276(+)	frameshift,internal_stop_codon	628..630(+),1276..1278(+),697..699(+)	714,795	WP_011068835.1	type I restriction-modification system subunit M	100.0	17.8	51.3
MGA_22	LOCUS_00220	sequence03:2887..3345(-)	internal_stop_codon	3532..3534(-),2887..2889(-),3463..3465(-)		WP_011068835.1	type I restriction-modification system subunit M	100.0	17.8	52.0
MGA_23	LOCUS_00230	sequence03:3532..3813(-)	internal_stop_codon	3532..3534(-),3463..3465(-)		WP_011068835.1	type I restriction-modification system subunit M	100.0	9.9	39.8
MGA_25	LOCUS_00240	sequence04:197..658(+)	frameshift		656,98	WP_001040568.1	elongation factor Tu	100.0	38.6	75.2
MGA_26	LOCUS_00250	sequence04:708..1112(+)	frameshift		655	WP_001040724.1	elongation factor Tu	98.5	33.2	72.7
MGA_27	LOCUS_00260	sequence04:2305..2616(+)	frameshift,internal_stop_codon	2611..2613(+)	2568	WP_010964019.1	tRNA (cytidine(34)-2'-O)-methyltransferase	84.5	53.8	46.0
MGA_28	LOCUS_00270	sequence04:2616..2771(+)	frameshift,internal_stop_codon	2611..2613(+),2566..2568(+)	2565	WP_010883298.1	tRNA (cytidine(34)-2'-O)-methyltransferase	96.1	31.4	55.1
MGA_29	LOCUS_00280	sequence04:3118..3273(-)	internal_stop_codon	3277..3279(-)		WP_010883298.1	tRNA (cytidine(34)-2'-O)-methyltransferase	96.1	31.4	55.1
MGA_30	LOCUS_00290	sequence04:3277..3585(-)	internal_stop_codon	3277..3279(-)		WP_010964019.1	tRNA (cytidine(34)-2'-O)-methyltransferase	90.2	56.9	45.7
MGA_46	LOCUS_00440	sequence06:2062..2580(+)	frameshift,internal_stop_codon	2632..2634(+)	2574	WP_011183134.1	signal recognition particle-docking protein FtsY	99.4	49.3	36.1
MGA_47	LOCUS_00450	sequence06:2766..3095(+)	frameshift,internal_stop_codon	2632..2634(+)	2574	WP_000007678.1	signal recognition particle-docking protein FtsY	95.4	25.0	63.5
MGA_48	LOCUS_00460	sequence06:3092..3430(-)	internal_stop_codon	3563..3565(-)		WP_000007678.1	signal recognition particle-docking protein FtsY	92.9	25.0	63.5
MGA_49	LOCUS_00470	sequence06:3563..4135(-)	internal_stop_codon	3563..3565(-)		WP_011183134.1	signal recognition particle-docking protein FtsY	98.9	54.0	40.5
MGA_106	LOCUS_01020	sequence12:3832..4176(-)	internal_stop_codon	4219..4221(-)		WP_003640703.1	translation elongation factor 4	99.1	18.5	61.1
MGA_111	LOCUS_01060	sequence13:3045..3212(+)	partial			WP_003564756.1	30S ribosomal protein S16	90.9	57.1	71.2
MGA_112	LOCUS_01070	sequence13:3278..3571(+)	internal_stop_codon	3569..3571(+)		WP_011183438.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	99.0	39.5	42.7
MGA_113	LOCUS_01080	sequence13:3701..3886(+)	internal_stop_codon	3902..3904(+),3569..3571(+),3884..3886(+)		WP_011016280.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	100.0	25.2	68.9
MGA_117	LOCUS_01120	sequence13:5839..6606(-)	partial			WP_011166932.1	NAD-dependent DNA ligase LigA	98.0	37.9	34.9
MGA_118	LOCUS_01130	sequence13:7039..7587(-)	internal_stop_codon	6949..6951(-),7768..7770(-),7039..7041(-)		WP_011476297.1	NAD-dependent DNA ligase LigA	100.0	27.1	44.0
MGA_119	LOCUS_01140	sequence13:7910..8374(-)	partial			WP_011016472.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	100.0	45.7	48.7
MGA_123	LOCUS_01180	sequence13:11270..11764(+)	internal_stop_codon	11825..11827(+),11963..11965(+),11762..11764(+),12050..12052(+)		WP_011183485.1	tyrosine--tRNA ligase	99.4	40.2	46.4
MGA_124	LOCUS_01190	sequence13:12068..12505(+)	internal_stop_codon	11825..11827(+),11963..11965(+),12050..12052(+)		WP_011166856.1	tyrosine--tRNA ligase	97.2	34.1	32.2
MGA_130	LOCUS_01250	sequence13:15828..16319(+)	partial			WP_010494164.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	90.8	59.3	35.1
MGA_137	LOCUS_01320	sequence13:21605..22009(-)	internal_stop_codon	21605..21607(-)		WP_011108937.1	alpha-amylase family glycosyl hydrolase	78.4	15.2	49.5
MGA_141	LOCUS_01360	sequence13:24266..24436(+)	internal_stop_codon	24434..24436(+)		WP_002894857.1	UMP kinase	94.6	21.6	54.7
MGA_142	LOCUS_01370	sequence13:24494..24985(+)	internal_stop_codon	24434..24436(+)		WP_002293877.1	UMP kinase	95.1	64.2	50.3
MGA_147	LOCUS_01420	sequence13:28529..29047(+)	internal_stop_codon	29045..29047(+)		WP_011947941.1	TatD family hydrolase	98.8	61.4	36.5
MGA_148	LOCUS_01430	sequence13:29060..29332(+)	internal_stop_codon	29045..29047(+)		WP_033448020.1	TatD family hydrolase	94.4	33.2	43.5
MGA_149	LOCUS_01440	sequence13:29332..29913(+)	internal_stop_codon	29911..29913(+)		WP_011182902.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	97.9	74.5	46.7
MGA_151	LOCUS_01460	sequence13:30473..30658(+)	internal_stop_codon	30656..30658(+)		WP_003700615.1	phosphopyruvate hydratase	86.9	12.0	75.5
MGA_152	LOCUS_01470	sequence13:30677..31426(+)	internal_stop_codon	30656..30658(+),31424..31426(+)		WP_003643976.1	phosphopyruvate hydratase	99.2	52.3	54.3
MGA_153	LOCUS_01480	sequence13:31454..31831(+)	internal_stop_codon	31424..31426(+)		WP_002985288.1	phosphopyruvate hydratase	100.0	28.7	75.2
MGA_154	LOCUS_01490	sequence13:32436..32939(+)	partial			WP_011166549.1	phosphatidate cytidylyltransferase	74.9	37.5	43.0
MGA_157	LOCUS_01520	sequence13:33853..34875(+)	internal_stop_codon	34873..34875(+)		WP_011183185.1	PolC-type DNA polymerase III	100.0	23.4	33.0
MGA_158	LOCUS_01530	sequence13:35074..35562(+)	internal_stop_codon	35560..35562(+),35788..35790(+),34873..34875(+)		WP_011166548.1	PolC-type DNA polymerase III	100.0	10.9	42.6
MGA_159	LOCUS_01540	sequence13:35791..36180(+)	internal_stop_codon	35560..35562(+),35788..35790(+),36178..36180(+)		WP_031296849.1	PolC-type DNA polymerase III	98.4	7.8	59.1
MGA_160	LOCUS_01550	sequence13:36268..36723(+)	internal_stop_codon	36796..36798(+),36178..36180(+),36808..36810(+),36721..36723(+)		WP_011183185.1	PolC-type DNA polymerase III	100.0	10.0	55.6
MGA_162	LOCUS_01570	sequence13:37435..37587(+)	internal_stop_codon	37786..37788(+),37585..37587(+)		WP_003233007.1	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU	100.0	17.8	52.0
MGA_164	LOCUS_01590	sequence13:38017..38247(+)	partial			WP_000766420.1	Cof-type HAD-IIB family hydrolase	86.8	22.4	45.5
MGA_167	LOCUS_01620	sequence13:39077..39961(+)	internal_stop_codon	39959..39961(+)		WP_003245789.1	recombinase RecA	94.2	79.6	63.9
MGA_168	LOCUS_01630	sequence13:40222..40452(+)	internal_stop_codon	40618..40620(+),40450..40452(+)		WP_015944383.1	TIGR00282 family metallophosphoesterase	90.8	26.6	52.2
MGA_174	LOCUS_01690	sequence13:49276..49629(+)	frameshift,internal_stop_codon	49145..49147(+),49103..49105(+)	49615,49708,49207	WP_042733551.1	IS3 family transposase	93.2	25.8	49.1
MGA_175	LOCUS_01700	sequence13:50423..50638(+)	internal_stop_codon	50636..50638(+),50894..50896(+)		WP_003225828.1	type I methionyl aminopeptidase	93.0	26.6	50.0
MGA_184	LOCUS_01790	sequence13:56395..56736(-)	internal_stop_codon	56869..56871(-)		WP_000007678.1	signal recognition particle-docking protein FtsY	100.0	27.2	60.2
MGA_185	LOCUS_01800	sequence13:56869..57441(-)	internal_stop_codon	56869..56871(-)		WP_011183134.1	signal recognition particle-docking protein FtsY	98.9	54.0	40.5
MGA_193	LOCUS_01880	sequence13:61513..61809(+)	partial			WP_011108937.1	alpha-amylase family glycosyl hydrolase	99.0	14.0	51.5
MGA_204	LOCUS_01990	sequence13:67897..68631(+)	partial			WP_012546182.1	replicative DNA helicase	92.6	48.9	35.0
MGA_232	LOCUS_02270	sequence13:87205..87408(+)	internal_stop_codon	86986..86988(+),87109..87111(+),87172..87174(+)		WP_011262514.1	sugar ABC transporter permease	100.0	22.4	46.4
MGA_239	LOCUS_02340	sequence13:91062..92048(-)	internal_stop_codon	92130..92132(-),92160..92162(-),92061..92063(-)		WP_002485248.1	aldehyde dehydrogenase	87.8	64.9	42.6
MGA_243	LOCUS_02380	sequence13:93380..93652(+)	internal_stop_codon	93650..93652(+),93227..93229(+)		WP_005482097.1	pullulanase-type alpha-1,6-glucosidase	96.7	6.8	39.6
MGA_248	LOCUS_02430	sequence13:95607..95822(+)	internal_stop_codon	95553..95555(+),95820..95822(+),95865..95867(+)		WP_011183397.1	alpha,alpha-phosphotrehalase	95.8	11.9	45.6
MGA_250	LOCUS_02450	sequence13:96214..97281(+)	internal_stop_codon	97456..97458(+),97444..97446(+),97486..97488(+),97279..97281(+)		WP_010990086.1	glycoside hydrolase family 65 protein	97.2	43.3	28.4
MGA_251	LOCUS_02460	sequence13:97615..97839(+)	internal_stop_codon	97456..97458(+),97444..97446(+),97837..97839(+),97486..97488(+)		WP_002288124.1	glycosyl hydrolase family 65 protein	85.1	8.5	49.2
MGA_252	LOCUS_02470	sequence13:97843..98367(+)	internal_stop_codon	98365..98367(+),97837..97839(+),98410..98412(+)		WP_013096414.1	glycoside hydrolase family 65 protein	83.9	19.1	39.5
MGA_253	LOCUS_02480	sequence13:98744..99256(+)	internal_stop_codon	98660..98662(+),99254..99256(+)		WP_011476249.1	beta-phosphoglucomutase	95.3	71.7	42.0
MGA_255	LOCUS_02500	sequence13:101201..101938(+)	partial			WP_011022105.1	McrB family protein	84.5	26.4	35.7
MGA_257	LOCUS_02520	sequence13:102535..103710(+)	partial			WP_011022105.1	McrB family protein	67.0	36.0	33.1
MGA_265	LOCUS_02600	sequence13:107404..107763(+)	internal_stop_codon	107374..107376(+)		WP_010906417.1	50S ribosomal protein L13	99.2	79.7	61.0
MGA_276	LOCUS_02710	sequence13:117002..117508(-)	internal_stop_codon	116957..116959(-),117002..117004(-),116918..116920(-)		WP_005458327.1	endonuclease	58.9	17.7	35.6
MGA_277	LOCUS_02720	sequence13:118222..118485(-)	internal_stop_codon	118222..118224(-),118003..118005(-),118123..118125(-)		WP_011166694.1	DNA topoisomerase IV subunit B	96.6	13.1	70.2
MGA_278	LOCUS_02730	sequence13:120081..121157(+)	internal_stop_codon	121155..121157(+)		WP_011183072.1	pyruvate kinase	98.0	73.4	63.5
MGA_284	LOCUS_02790	sequence13:124254..124496(+)	frameshift		124448	WP_011183072.1	pyruvate kinase	80.0	13.4	56.2
MGA_285	LOCUS_02800	sequence13:124568..125128(+)	frameshift,internal_stop_codon	125127..125129(+)	124448	WP_011183072.1	pyruvate kinase	98.9	38.5	67.9
MGA_296	LOCUS_02910	sequence13:134403..135146(+)	internal_stop_codon	135144..135146(+)		WP_002438915.1	DNA-binding protein WhiA	93.1	77.1	28.8
MGA_297	LOCUS_02920	sequence13:135306..135437(-)	internal_stop_codon	135606..135608(-),135528..135530(-),135474..135476(-)		WP_010965656.1	50S ribosomal protein L20	97.7	35.3	64.3
MGA_299	LOCUS_02940	sequence13:135944..136399(-)	partial			WP_011183085.1	translation initiation factor IF-3	88.1	74.4	48.1
MGA_300	LOCUS_02950	sequence13:136887..137165(+)	internal_stop_codon	137163..137165(+)		WP_004080372.1	histidine--tRNA ligase	97.8	21.7	44.0
MGA_301	LOCUS_02960	sequence13:137172..138236(+)	internal_stop_codon	137163..137165(+)		WP_002289103.1	histidine--tRNA ligase	70.1	56.5	41.8
MGA_302	LOCUS_02970	sequence13:138301..139422(+)	internal_stop_codon	139420..139422(+),139456..139458(+),138298..138300(+),139504..139506(+)		WP_011166529.1	aspartate--tRNA ligase	98.4	65.0	45.1
MGA_303	LOCUS_02980	sequence13:139606..139938(+)	internal_stop_codon	139420..139422(+),139456..139458(+),139504..139506(+)		WP_003229758.1	aspartate--tRNA ligase	99.1	18.4	53.2
MGA_306	LOCUS_03010	sequence13:140736..140924(-)	internal_stop_codon	140736..140738(-)		WP_011183562.1	ABC transporter permease	98.4	19.1	45.9
MGA_307	LOCUS_03020	sequence13:141344..141772(-)	internal_stop_codon	141812..141814(-)		WP_002679664.1	ABC transporter permease	85.9	32.3	31.1
MGA_311	LOCUS_03060	sequence13:142549..142830(-)	internal_stop_codon	142993..142995(-)		WP_011166221.1	ABC transporter ATP-binding protein	83.9	14.5	57.7
MGA_312	LOCUS_03070	sequence13:143416..144801(-)	partial			WP_011183564.1	ABC transporter ATP-binding protein	70.7	64.6	50.2
MGA_316	LOCUS_03110	sequence13:146789..147169(+)	internal_stop_codon	147410..147412(+)		WP_020862982.1	PTS transporter subunit EIIC	73.0	12.3	46.7
MGA_317	LOCUS_03120	sequence13:147911..148195(+)	internal_stop_codon	148193..148195(+),147677..147679(+),148403..148405(+)		WP_020862982.1	PTS transporter subunit EIIC	93.6	11.8	54.5
MGA_318	LOCUS_03130	sequence13:148211..148405(+)	internal_stop_codon	148193..148195(+),148403..148405(+)		WP_011166265.1	PTS transporter subunit EIIC	93.8	10.3	43.3
MGA_319	LOCUS_03140	sequence13:148745..149452(+)	partial			WP_011987039.1	glucose PTS transporter subunit IIA	73.2	25.5	40.6
MGA_320	LOCUS_03150	sequence13:149506..150159(-)	partial			WP_004083002.1	ABC transporter ATP-binding protein	97.2	35.3	54.0
MGA_322	LOCUS_03170	sequence13:150577..150942(-)	partial			WP_011836926.1	ABC transporter ATP-binding protein	100.0	20.4	23.1
MGA_325	LOCUS_03200	sequence13:151488..152288(-)	internal_stop_codon	151488..151490(-),152514..152516(-)		WP_010966556.1	ABC transporter ATP-binding protein	99.2	45.0	43.8
MGA_328	LOCUS_03230	sequence13:154065..154784(+)	internal_stop_codon	153924..153926(+)		WP_001038010.1	tRNA 2-thiouridine(34) synthase MnmA	99.6	65.5	51.2
MGA_329	LOCUS_03240	sequence13:154924..155196(+)	internal_stop_codon	154900..154902(+),155194..155196(+),155380..155382(+),154819..154821(+),155254..155256(+)		WP_011166380.1	alanine--tRNA ligase	98.9	10.2	68.1
MGA_330	LOCUS_03250	sequence13:155488..157404(+)	internal_stop_codon	155380..155382(+),155254..155256(+)		WP_011166380.1	alanine--tRNA ligase	97.5	72.7	34.3
MGA_334	LOCUS_03290	sequence13:159184..159618(+)	internal_stop_codon	159151..159153(+)		WP_003416006.1	hypoxanthine phosphoribosyltransferase	97.2	80.0	50.0
MGA_335	LOCUS_03300	sequence13:160063..160788(+)	internal_stop_codon	159910..159912(+)		WP_000760485.1	DNA cytosine methyltransferase	100.0	74.9	33.5
MGA_339	LOCUS_03340	sequence13:163141..163536(-)	internal_stop_codon	163600..163602(-)		WP_004080738.1	SPFH domain-containing protein	100.0	44.3	46.7
MGA_340	LOCUS_03350	sequence13:163600..164073(-)	internal_stop_codon	163600..163602(-)		WP_011015666.1	SPFH domain-containing protein	86.0	45.9	53.3
MGA_344	LOCUS_03390	sequence13:165888..166616(-)	internal_stop_codon	166638..166640(-),166836..166838(-)		WP_011166468.1	DUF31 family protein	99.2	35.9	46.7
MGA_345	LOCUS_03400	sequence13:166836..167219(-)	internal_stop_codon	166638..166640(-),167223..167225(-),166836..166838(-)		WP_011166468.1	DUF31 family protein	97.6	18.4	45.6
MGA_348	LOCUS_03430	sequence13:168299..168544(+)	partial			WP_010874718.1	methyltransferase	96.3	18.3	38.6
MGA_356	LOCUS_03510	sequence13:171501..172304(-)	partial			WP_012775427.1	LPXTG cell wall anchor domain-containing protein	58.1	19.6	28.0
MGA_359	LOCUS_03540	sequence13:174173..174526(+)	internal_stop_codon	174524..174526(+)		WP_129622721.1	aminotransferase class V-fold PLP-dependent enzyme	98.3	30.0	44.0
MGA_360	LOCUS_03550	sequence13:174803..175327(+)	internal_stop_codon	174524..174526(+)		WP_129622721.1	aminotransferase class V-fold PLP-dependent enzyme	97.7	44.2	48.0
MGA_361	LOCUS_03560	sequence13:175317..175661(+)	internal_stop_codon	175659..175661(+)		WP_011166686.1	iron-sulfur cluster assembly scaffold protein	82.5	65.5	41.1
MGA_362	LOCUS_03570	sequence13:175732..176265(+)	internal_stop_codon	176263..176265(+)		WP_011166731.1	DNA polymerase IV	97.7	42.5	35.8
MGA_364	LOCUS_03590	sequence13:176980..177312(+)	internal_stop_codon	177310..177312(+)		WP_010879950.1	nicotinate (nicotinamide) nucleotide adenylyltransferase	100.0	66.7	43.4
MGA_373	LOCUS_03680	sequence13:182425..182613(+)	internal_stop_codon	182611..182613(+),182698..182700(+)		WP_010875035.1	glutamate--tRNA ligase	96.8	12.4	78.3
MGA_374	LOCUS_03690	sequence13:183019..183279(+)	internal_stop_codon	182920..182922(+),182974..182976(+),182827..182829(+),183277..183279(+),183388..183390(+)		WP_000031057.1	glutamate--tRNA ligase	100.0	17.9	65.5
MGA_376	LOCUS_03710	sequence13:183571..183828(+)	internal_stop_codon	183475..183477(+),183388..183390(+)		WP_011166335.1	glutamate--tRNA ligase	85.9	14.9	50.7
MGA_378	LOCUS_03730	sequence13:184710..184949(+)	internal_stop_codon	184947..184949(+)		WP_002287130.1	ribonuclease J	100.0	14.1	44.3
MGA_391	LOCUS_03860	sequence13:192593..192841(+)	internal_stop_codon	192839..192841(+)		WP_002356207.1	30S ribosomal protein S3	98.8	37.2	67.9
MGA_397	LOCUS_03920	sequence13:194474..194698(+)	internal_stop_codon	194696..194698(+),194756..194758(+)		WP_000013542.1	50S ribosomal protein L5	97.3	40.0	56.9
MGA_405	LOCUS_04000	sequence13:198071..198211(+)	partial			WP_011166245.1	2-hydroxyacid dehydrogenase	97.8	13.7	62.2
MGA_406	LOCUS_04010	sequence13:198544..198810(+)	internal_stop_codon	198448..198450(+),198808..198810(+),198826..198828(+),198538..198540(+),198871..198873(+)		WP_011166523.1	proline--tRNA ligase	100.0	18.6	67.0
MGA_407	LOCUS_04020	sequence13:198931..199176(+)	internal_stop_codon	198808..198810(+),198826..198828(+),198871..198873(+),199174..199176(+)		WP_005793720.1	proline--tRNA ligase	100.0	16.3	54.3
MGA_408	LOCUS_04030	sequence13:199210..199839(+)	internal_stop_codon	199174..199176(+)		WP_004450718.1	proline--tRNA ligase	100.0	42.7	39.5
MGA_414	LOCUS_04090	sequence13:202230..202787(-)	internal_stop_codon	202803..202805(-)		WP_011166502.1	ribulose-phosphate 3-epimerase	90.3	76.0	40.2
MGA_415	LOCUS_04100	sequence13:202873..203277(-)	internal_stop_codon	203383..203385(-)		WP_001162036.1	ribosome small subunit-dependent GTPase A	97.0	44.8	46.2
MGA_416	LOCUS_04110	sequence13:203383..203745(-)	internal_stop_codon	203383..203385(-)		WP_001113932.1	ribosome small subunit-dependent GTPase A	94.2	39.6	40.7
MGA_417	LOCUS_04120	sequence13:203942..204745(-)	internal_stop_codon	203942..203944(-)		WP_011101478.1	Stk1 family PASTA domain-containing Ser/Thr kinase	93.6	37.2	36.1
MGA_418	LOCUS_04130	sequence13:205056..205496(-)	internal_stop_codon	205056..205058(-)		WP_011183117.1	protein phosphatase 2C domain-containing protein	97.9	55.9	38.6
MGA_431	LOCUS_04260	sequence13:217777..218022(+)	internal_stop_codon	217732..217734(+),218020..218022(+),217744..217746(+),217555..217557(+),218173..218175(+)		WP_011124423.1	isoleucine--tRNA ligase	97.5	8.2	41.8
MGA_433	LOCUS_04280	sequence13:218371..218652(+)	internal_stop_codon	218767..218769(+),218173..218175(+),218650..218652(+),218812..218814(+),218353..218355(+),218299..218301(+),218692..218694(+),218836..218838(+)		WP_011166763.1	isoleucine--tRNA ligase	97.8	10.6	51.5
MGA_434	LOCUS_04290	sequence13:219010..219132(+)	internal_stop_codon	218944..218946(+),218812..218814(+),219130..219132(+),218947..218949(+),219307..219309(+),218767..218769(+),218836..218838(+)		WP_011166763.1	isoleucine--tRNA ligase	97.5	4.3	64.1
MGA_435	LOCUS_04300	sequence13:219409..220059(+)	internal_stop_codon	219307..219309(+),219130..219132(+)		WP_000768163.1	isoleucine--tRNA ligase	79.6	17.7	33.5
MGA_441	LOCUS_04360	sequence13:222469..222678(-)	internal_stop_codon	222685..222687(-)		WP_003722867.1	phosphoenolpyruvate--protein phosphotransferase	97.1	11.7	62.7
MGA_444	LOCUS_04390	sequence13:225270..225755(-)	internal_stop_codon	225762..225764(-)		WP_003021391.1	N-acetylglucosamine-6-phosphate deacetylase	95.0	40.1	41.9
MGA_446	LOCUS_04410	sequence13:226363..226650(-)	internal_stop_codon	226918..226920(-)		WP_002456966.1	N-acetylmuramic acid 6-phosphate etherase	93.7	30.2	38.2
MGA_447	LOCUS_04420	sequence13:226918..227223(-)	internal_stop_codon	226918..226920(-)		WP_010963499.1	N-acetylmuramic acid 6-phosphate etherase	97.0	32.8	36.4
MGA_448	LOCUS_04430	sequence13:227724..228344(+)	internal_stop_codon	228342..228344(+),228360..228362(+),228534..228536(+),228552..228554(+),228369..228371(+)		WP_011166334.1	PTS transporter subunit EIIC	97.6	37.7	34.6
MGA_449	LOCUS_04440	sequence13:228726..229019(+)	internal_stop_codon	228708..228710(+),228534..228536(+),229215..229217(+),228552..228554(+),229017..229019(+)		WP_011262282.1	PTS glucose transporter subunit IIBC	77.3	15.8	52.0
MGA_454	LOCUS_04490	sequence13:230014..230307(-)	partial			WP_011674103.1	Cof-type HAD-IIB family hydrolase	82.5	29.4	40.0
MGA_455	LOCUS_04500	sequence13:230485..230901(-)	partial			WP_010874739.1	HAD family hydrolase	81.9	40.1	32.7
MGA_456	LOCUS_04510	sequence13:231044..231454(-)	internal_stop_codon	231044..231046(-),231491..231493(-)		WP_010874854.1	L-ribulose-5-phosphate 4-epimerase	99.3	56.2	68.4
MGA_457	LOCUS_04520	sequence13:231759..232214(-)	internal_stop_codon	231675..231677(-),231759..231761(-),232371..232373(-),232278..232280(-)		WP_010874848.1	L-ribulose-5-phosphate 3-epimerase	99.3	49.2	64.7
MGA_458	LOCUS_04530	sequence13:232432..232593(-)	internal_stop_codon	232702..232704(-),232633..232635(-),232720..232722(-),232672..232674(-)		WP_010874849.1	3-dehydro-L-gulonate-6-phosphate decarboxylase	100.0	24.3	71.7
MGA_459	LOCUS_04540	sequence13:232720..233079(-)	internal_stop_codon	232702..232704(-),232633..232635(-),232720..232722(-),232672..232674(-)		WP_010874849.1	3-dehydro-L-gulonate-6-phosphate decarboxylase	100.0	55.0	60.0
MGA_460	LOCUS_04550	sequence13:233090..233365(-)	internal_stop_codon	233495..233497(-)		WP_010874850.1	PTS sugar transporter subunit IIA	98.9	56.6	51.1
MGA_463	LOCUS_04580	sequence13:234202..234486(-)	frameshift,internal_stop_codon	234583..234585(-),234007..234009(-),234202..234204(-),234037..234039(-),234064..234066(-)	234112	WP_010874852.1	PTS ascorbate transporter subunit IIC	100.0	14.2	73.4
MGA_465	LOCUS_04600	sequence13:234895..235053(-)	internal_stop_codon	234895..234897(-),235072..235074(-),234811..234813(-)		WP_010874852.1	PTS ascorbate transporter subunit IIC	100.0	7.9	61.5
MGA_466	LOCUS_04610	sequence13:235638..236333(-)	internal_stop_codon	236367..236369(-)		WP_205842938.1	phosphotriesterase	100.0	65.8	90.5
MGA_467	LOCUS_04620	sequence13:236367..236693(-)	internal_stop_codon	236367..236369(-)		WP_205842938.1	phosphotriesterase	100.0	30.8	93.5
MGA_477	LOCUS_04720	sequence13:241916..242173(+)	partial			WP_003547047.1	sugar-phosphatase	84.7	28.1	40.8
MGA_483	LOCUS_04780	sequence13:245888..246163(-)	internal_stop_codon	245864..245866(-),245888..245890(-),246260..246262(-),246203..246205(-)		WP_000658370.1	nicotinate phosphoribosyltransferase	100.0	23.7	49.5
MGA_484	LOCUS_04790	sequence13:246260..246553(-)	internal_stop_codon	246260..246262(-),246203..246205(-)		WP_011183486.1	nicotinate phosphoribosyltransferase	99.0	27.6	44.3
MGA_496	LOCUS_04910	sequence13:252441..252848(+)	frameshift		252424,252397	WP_011183537.1	MurR/RpiR family transcriptional regulator	97.8	50.9	28.3
MGA_497	LOCUS_04920	sequence13:254211..254600(+)	internal_stop_codon	254028..254030(+)		WP_011166679.1	class I mannose-6-phosphate isomerase	100.0	41.7	32.1
MGA_498	LOCUS_04930	sequence13:254800..255612(-)	internal_stop_codon	255664..255666(-),254800..254802(-)		WP_011183246.1	transketolase	94.8	41.4	41.0
MGA_499	LOCUS_04940	sequence13:255664..256194(-)	internal_stop_codon	256198..256200(-),255664..255666(-),256417..256419(-)		WP_010989730.1	transketolase	86.4	23.2	40.3
MGA_500	LOCUS_04950	sequence13:256198..256374(-)	internal_stop_codon	256198..256200(-),256417..256419(-)		WP_010989730.1	transketolase	100.0	8.9	61.0
MGA_502	LOCUS_04970	sequence13:256931..257272(-)	internal_stop_codon	257282..257284(-),256931..256933(-)		WP_011704190.1	PTS ascorbate transporter subunit IIC	98.2	25.4	58.6
MGA_503	LOCUS_04980	sequence13:257282..258055(-)	internal_stop_codon	257282..257284(-)		WP_011166584.1	PTS ascorbate-specific subunit IIBC	99.2	41.0	38.8
MGA_504	LOCUS_04990	sequence13:258156..258428(-)	partial			WP_011166584.1	PTS ascorbate-specific subunit IIBC	85.6	12.6	40.5
MGA_512	LOCUS_05070	sequence13:262113..262541(-)	internal_stop_codon	262545..262547(-)		WP_012546112.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	98.6	57.6	36.1
MGA_514	LOCUS_05090	sequence13:262790..263134(-)	internal_stop_codon	263195..263197(-),263273..263275(-),263183..263185(-)		WP_002899531.1	ATP-binding cassette domain-containing protein	79.8	16.9	56.0
MGA_515	LOCUS_05100	sequence13:263273..263479(-)	partial			WP_048066010.1	ABC transporter ATP-binding protein	86.8	22.3	42.4
MGA_516	LOCUS_05110	sequence13:263483..263659(-)	internal_stop_codon	263690..263692(-),263483..263485(-),263831..263833(-),263273..263275(-)		WP_041168847.1	ATP-binding cassette domain-containing protein	96.6	10.2	75.0
MGA_517	LOCUS_05120	sequence13:264023..264409(-)	internal_stop_codon	263963..263965(-),263831..263833(-),264023..264025(-)		WP_010905087.1	ATP-binding cassette domain-containing protein	100.0	23.5	57.8
MGA_520	LOCUS_05150	sequence13:265389..266138(-)	internal_stop_codon	265302..265304(-),265389..265391(-),266235..266237(-)		WP_000579379.1	preprotein translocase subunit SecA	100.0	29.8	41.7
MGA_521	LOCUS_05160	sequence13:266235..266582(-)	internal_stop_codon	266664..266666(-),266622..266624(-),266235..266237(-)		WP_002289770.1	preprotein translocase subunit SecA	100.0	13.6	63.5
MGA_522	LOCUS_05170	sequence13:266664..267473(-)	internal_stop_codon	266664..266666(-),266622..266624(-)		WP_011836579.1	preprotein translocase subunit SecA	94.4	30.4	57.6
MGA_526	LOCUS_05210	sequence13:268964..269704(+)	internal_stop_codon	268952..268954(+)		WP_000003348.1	oligoendopeptidase F	98.8	39.3	42.0
MGA_538	LOCUS_05330	sequence13:275148..275411(+)	internal_stop_codon	275409..275411(+)		WP_010874574.1	ABC transporter ATP-binding protein	93.1	18.9	43.2
MGA_539	LOCUS_05340	sequence13:275616..275924(+)	internal_stop_codon	275409..275411(+),275922..275924(+)		WP_010874574.1	ABC transporter ATP-binding protein	99.0	23.9	59.4
MGA_540	LOCUS_05350	sequence13:275964..276209(+)	internal_stop_codon	275922..275924(+)		WP_003566704.1	ABC transporter ATP-binding protein	84.0	19.4	60.3
MGA_541	LOCUS_05360	sequence13:276199..276600(+)	partial			WP_003548861.1	ATP-binding cassette domain-containing protein	94.7	39.8	50.8
MGA_543	LOCUS_05380	sequence13:278026..278625(+)	partial			WP_010874575.1	ATP-binding cassette domain-containing protein	92.5	21.6	50.0
MGA_545	LOCUS_05400	sequence13:279190..281082(-)	partial			WP_012546468.1	chromosome segregation protein SMC	65.4	34.1	23.2
MGA_547	LOCUS_05420	sequence13:282362..282829(+)	internal_stop_codon	282827..282829(+)		WP_011167112.1	PDxFFG protein	87.1	6.4	27.4
MGA_549	LOCUS_05440	sequence13:283835..284518(+)	internal_stop_codon	284516..284518(+)		WP_011167112.1	PDxFFG protein	91.2	10.3	36.5
MGA_557	LOCUS_05520	sequence13:287789..288175(+)	internal_stop_codon	288173..288175(+),288389..288391(+)		WP_011167113.1	ABC transporter substrate-binding protein	53.9	8.5	41.7
MGA_558	LOCUS_05530	sequence13:288971..289333(+)	internal_stop_codon	289331..289333(+),289505..289507(+)		WP_011167113.1	ABC transporter substrate-binding protein	89.2	10.6	48.6
MGA_560	LOCUS_05550	sequence13:290824..291207(+)	internal_stop_codon	291205..291207(+),291286..291288(+)		WP_011167114.1	ABC transporter permease	89.8	31.9	45.6
MGA_562	LOCUS_05570	sequence13:291436..291588(+)	internal_stop_codon	291205..291207(+),291586..291588(+),291286..291288(+)		WP_011167114.1	ABC transporter permease	100.0	14.0	78.0
MGA_564	LOCUS_05590	sequence13:292011..292271(+)	internal_stop_codon	291990..291992(+),292479..292481(+),292281..292283(+),292512..292514(+),292269..292271(+)		WP_011167115.1	ABC transporter permease	100.0	24.1	46.5
MGA_566	LOCUS_05610	sequence13:292647..292886(+)	internal_stop_codon	292512..292514(+),292479..292481(+),292569..292571(+)		WP_011167115.1	ABC transporter permease	100.0	23.5	63.3
MGA_568	LOCUS_05630	sequence13:293504..293731(+)	internal_stop_codon	293729..293731(+)		WP_011167116.1	ABC transporter ATP-binding protein	96.0	15.0	70.8
MGA_569	LOCUS_05640	sequence13:293783..294244(+)	internal_stop_codon	294491..294493(+),294242..294244(+),293729..293731(+),294404..294406(+)		WP_011167116.1	ABC transporter ATP-binding protein	100.0	31.8	73.2
MGA_570	LOCUS_05650	sequence13:294260..294406(+)	internal_stop_codon	294491..294493(+),294242..294244(+),294404..294406(+)		WP_011167116.1	ABC transporter ATP-binding protein	100.0	10.0	70.8
MGA_571	LOCUS_05660	sequence13:294507..295040(+)	internal_stop_codon	295038..295040(+)		WP_011167117.1	ABC transporter ATP-binding protein	92.7	35.8	53.7
MGA_572	LOCUS_05670	sequence13:295272..295775(+)	internal_stop_codon	295773..295775(+),295038..295040(+)		WP_020863027.1	ABC transporter ATP-binding protein	98.8	37.5	74.5
MGA_574	LOCUS_05690	sequence13:297715..297975(+)	internal_stop_codon	297973..297975(+)		WP_011166788.1	heat-inducible transcriptional repressor HrcA	79.1	19.4	42.6
MGA_578	LOCUS_05730	sequence13:299650..300261(+)	internal_stop_codon	300280..300282(+),300259..300261(+)		WP_011183314.1	molecular chaperone DnaK	100.0	34.3	72.4
MGA_579	LOCUS_05740	sequence13:300334..301458(+)	internal_stop_codon	300280..300282(+),300259..300261(+)		WP_011183314.1	molecular chaperone DnaK	97.1	61.3	56.5
MGA_582	LOCUS_05770	sequence13:302194..302481(+)	partial			WP_002903482.1	glutamyl aminopeptidase	91.6	24.6	40.2
MGA_583	LOCUS_05780	sequence13:302575..303285(+)	internal_stop_codon	302479..302481(+)		WP_048064463.1	M42 family metallopeptidase	91.9	63.7	34.8
MGA_585	LOCUS_05800	sequence13:308086..308820(+)	partial			WP_002656583.1	replicative DNA helicase	98.8	52.7	28.4
MGA_610	LOCUS_06050	sequence13:325714..326049(+)	partial			WP_011183201.1	DNA (cytosine-5-)-methyltransferase	92.8	28.4	43.6
MGA_613	LOCUS_06080	sequence13:326999..327697(+)	partial			WP_001304525.1	DUF262 domain-containing protein	80.6	33.5	26.6
MGA_618	LOCUS_06130	sequence13:330540..330896(+)	frameshift,internal_stop_codon	331035..331037(+),330894..330896(+)	331061	WP_011167044.1	F0F1 ATP synthase subunit A	82.2	34.1	33.7
MGA_619	LOCUS_06140	sequence13:331152..331451(+)	partial			WP_003421370.1	ATP synthase F0 subunit C	45.5	52.3	62.2
MGA_622	LOCUS_06170	sequence13:332596..333342(+)	internal_stop_codon	333340..333342(+)		WP_011183010.1	F0F1 ATP synthase subunit alpha	100.0	47.2	60.1
MGA_623	LOCUS_06180	sequence13:333343..333984(+)	internal_stop_codon	333982..333984(+),333340..333342(+)		WP_011167040.1	F0F1 ATP synthase subunit alpha	99.5	40.4	67.9
MGA_629	LOCUS_06240	sequence13:337154..337486(+)	internal_stop_codon	337484..337486(+)		WP_010871101.1	LemA family protein	98.2	56.6	41.7
MGA_633	LOCUS_06280	sequence13:339061..339507(+)	partial			WP_002661849.1	sugar ABC transporter ATP-binding protein	77.7	24.9	36.4
MGA_638	LOCUS_06330	sequence13:341363..342268(+)	internal_stop_codon	342266..342268(+)		WP_011183059.1	amidase family protein	95.0	60.4	42.7
MGA_639	LOCUS_06340	sequence13:342311..342685(+)	internal_stop_codon	342266..342268(+)		WP_011166930.1	amidase family protein	100.0	27.0	36.6
MGA_647	LOCUS_06420	sequence13:349119..349760(-)	internal_stop_codon	349872..349874(-),349869..349871(-),349959..349961(-)		WP_003388463.1	nucleotidyltransferase	94.4	55.0	33.6
MGA_666	LOCUS_06610	sequence13:362126..362521(-)	internal_stop_codon	362126..362128(-)		WP_011861198.1	cysteine hydrolase	99.2	62.1	36.6
MGA_669	LOCUS_06640	sequence13:364238..365224(+)	internal_stop_codon	365222..365224(+)		WP_002356165.1	pyrimidine-nucleoside phosphorylase	97.3	73.7	59.6
MGA_670	LOCUS_06650	sequence13:365270..365533(+)	internal_stop_codon	365222..365224(+)		WP_010905974.1	pyrimidine-nucleoside phosphorylase	90.8	18.4	44.3
MGA_671	LOCUS_06660	sequence13:365545..365670(+)	internal_stop_codon	365668..365670(+)		WP_002356166.1	deoxyribose-phosphate aldolase	95.1	17.7	64.1
MGA_672	LOCUS_06670	sequence13:365671..366207(+)	internal_stop_codon	365668..365670(+)		WP_011183018.1	deoxyribose-phosphate aldolase	98.9	80.0	56.8
MGA_673	LOCUS_06680	sequence13:366393..367247(+)	internal_stop_codon	367245..367247(+)		WP_011949094.1	cation-translocating P-type ATPase	84.9	25.3	41.7
MGA_675	LOCUS_06700	sequence13:367953..368219(+)	internal_stop_codon	367839..367841(+),368217..368219(+)		WP_011861573.1	cation-translocating P-type ATPase	100.0	10.0	62.5
MGA_676	LOCUS_06710	sequence13:368244..368564(+)	internal_stop_codon	368217..368219(+),368562..368564(+)		WP_010874566.1	cation-transporting P-type ATPase	100.0	12.4	51.9
MGA_677	LOCUS_06720	sequence13:368607..369029(+)	internal_stop_codon	368562..368564(+)		WP_010989583.1	cation-translocating P-type ATPase	90.7	14.3	24.4
MGA_682	LOCUS_06770	sequence13:371132..371629(+)	internal_stop_codon	371627..371629(+)		WP_003434984.1	ribonuclease R	91.5	20.3	28.5
MGA_683	LOCUS_06780	sequence13:371708..373348(+)	internal_stop_codon	371627..371629(+)		WP_011948032.1	ribonuclease R	92.7	69.5	40.4
MGA_685	LOCUS_06800	sequence13:373767..374135(+)	internal_stop_codon	373686..373688(+)		WP_000390783.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	87.7	41.8	34.3
MGA_686	LOCUS_06810	sequence13:375069..375701(+)	frameshift,internal_stop_codon	374913..374915(+),374982..374984(+),374832..374834(+)	375698	WP_011017027.1	methionine--tRNA ligase	100.0	34.1	32.6
MGA_688	LOCUS_06830	sequence13:376059..377513(-)	partial			WP_020862721.1	endopeptidase La	72.5	46.8	21.3
MGA_690	LOCUS_06850	sequence13:377878..378168(-)	internal_stop_codon	378259..378261(-),377878..377880(-)		WP_001058993.1	ATP-dependent Clp protease ATP-binding subunit ClpL	80.2	12.7	39.3
MGA_702	LOCUS_06970	sequence13:387517..387954(+)	internal_stop_codon	387952..387954(+)		WP_010874491.1	ABC transporter ATP-binding protein	74.5	18.4	57.4
MGA_703	LOCUS_06980	sequence13:388435..389049(+)	internal_stop_codon	389047..389049(+)		WP_010874491.1	ABC transporter ATP-binding protein	82.8	29.9	40.3
MGA_704	LOCUS_06990	sequence13:389116..389607(+)	internal_stop_codon	389047..389049(+)		WP_010874491.1	ABC transporter ATP-binding protein	98.8	27.1	41.6
MGA_706	LOCUS_07010	sequence13:390218..390589(+)	internal_stop_codon	389996..389998(+),389981..389983(+),390113..390115(+),390176..390178(+)		WP_010874492.1	sugar ABC transporter permease	91.1	34.0	47.3
MGA_714	LOCUS_07090	sequence13:395079..395516(+)	internal_stop_codon	395514..395516(+)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	97.2	44.4	44.4
MGA_715	LOCUS_07100	sequence13:395580..395849(+)	internal_stop_codon	395514..395516(+),395847..395849(+)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	95.5	25.9	42.4
MGA_717	LOCUS_07120	sequence13:396060..396494(+)	internal_stop_codon	396492..396494(+),395847..395849(+)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	97.9	44.4	46.5
MGA_719	LOCUS_07140	sequence13:397027..397404(+)	internal_stop_codon	397402..397404(+),396825..396827(+),397465..397467(+)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	96.8	37.3	51.2
MGA_724	LOCUS_07190	sequence13:406134..406277(-)	internal_stop_codon	406008..406010(-),406101..406103(-),406518..406520(-),406134..406136(-),406347..406349(-),406503..406505(-),406416..406418(-)		WP_003643180.1	leucine--tRNA ligase	89.4	5.2	78.6
MGA_726	LOCUS_07210	sequence13:407733..407855(-)	internal_stop_codon	407916..407918(-),407733..407735(-),407928..407930(-),407607..407609(-),407565..407567(-),407556..407558(-)		WP_001108730.1	leucine--tRNA ligase	100.0	5.0	82.5
MGA_727	LOCUS_07220	sequence13:408195..409160(+)	internal_stop_codon	409158..409160(+),409374..409376(+)		WP_002261954.1	GTPase ObgE	98.1	75.0	46.5
MGA_729	LOCUS_07240	sequence13:409513..409848(-)	internal_stop_codon	409849..409851(-),409903..409905(-),410101..410103(-),409870..409872(-)		WP_011167050.1	lipoprotein	98.2	15.0	49.6
MGA_732	LOCUS_07270	sequence13:410629..411078(-)	internal_stop_codon	410629..410631(-)		WP_011166263.1	DUF31 family protein	62.4	13.3	40.9
MGA_733	LOCUS_07280	sequence13:411112..412587(-)	partial			WP_010871167.1	chromosome segregation protein SMC	56.8	22.8	24.4
MGA_734	LOCUS_07290	sequence13:412816..413115(+)	internal_stop_codon	413113..413115(+),413152..413154(+)		WP_011167069.1	ABC transporter permease	97.0	19.5	36.5
MGA_735	LOCUS_07300	sequence13:413164..413598(+)	internal_stop_codon	413113..413115(+),413152..413154(+),413596..413598(+)		WP_011166520.1	ABC transporter permease	98.6	23.4	39.9
MGA_767	LOCUS_07620	sequence13:439603..440097(+)	internal_stop_codon	439570..439572(+)		WP_003131091.1	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	91.5	64.3	38.3
MGA_770	LOCUS_07650	sequence13:441486..441776(-)	frameshift,internal_stop_codon	441810..441812(-),441485..441487(-)	441692,441734	WP_011166600.1	Holliday junction resolvase RecU	93.8	64.6	33.7
MGA_771	LOCUS_07660	sequence13:441982..442461(+)	internal_stop_codon	441976..441978(+),442459..442461(+)		WP_011861867.1	triose-phosphate isomerase	100.0	63.6	45.7
MGA_772	LOCUS_07670	sequence13:443154..443438(+)	internal_stop_codon	443436..443438(+)		WP_004453953.1	lipoate--protein ligase	94.7	28.7	43.8
MGA_773	LOCUS_07680	sequence13:443466..443747(+)	internal_stop_codon	443856..443858(+),443436..443438(+),443745..443747(+)		WP_003722753.1	lipoate protein ligase LplA1	98.9	27.8	51.1
MGA_780	LOCUS_07750	sequence13:447065..447478(-)	internal_stop_codon	447065..447067(-),447614..447616(-)		WP_008363296.1	DUF4011 domain-containing protein	94.9	8.3	61.5
MGA_781	LOCUS_07760	sequence13:447614..448507(-)	internal_stop_codon	448571..448573(-),448688..448690(-),448508..448510(-),447614..447616(-)		WP_008363296.1	DUF4011 domain-containing protein	96.6	18.1	56.8
MGA_782	LOCUS_07770	sequence13:449180..449845(-)	internal_stop_codon	449180..449182(-),449978..449980(-)		WP_011166830.1	DUF4011 domain-containing protein	98.2	33.7	58.1
MGA_783	LOCUS_07780	sequence13:450242..450688(-)	internal_stop_codon	450242..450244(-),450152..450154(-),449978..449980(-)		WP_011166830.1	DUF4011 domain-containing protein	95.9	22.7	44.5
MGA_795	LOCUS_07900	sequence13:458376..458609(+)	internal_stop_codon	458607..458609(+)		WP_003405033.1	thymidine kinase	93.5	37.7	47.2
MGA_796	LOCUS_07910	sequence13:458706..458951(+)	internal_stop_codon	458607..458609(+)		WP_010966171.1	thymidine kinase	95.1	43.1	39.3
MGA_799	LOCUS_07940	sequence13:459755..459949(+)	internal_stop_codon	459998..460000(+),459947..459949(+),459950..459952(+)		WP_000148852.1	glucose-6-phosphate isomerase	96.9	13.8	50.0
MGA_800	LOCUS_07950	sequence13:460046..460411(+)	internal_stop_codon	459998..460000(+),459947..459949(+),459950..459952(+)		WP_001831993.1	glucose-6-phosphate isomerase	98.3	26.6	52.9
MGA_822	LOCUS_08170	sequence13:475594..476115(-)	partial			WP_011861230.1	ABC transporter ATP-binding protein	90.8	25.2	52.9
MGA_823	LOCUS_08180	sequence13:476380..476745(-)	partial			WP_011068826.1	ABC transporter ATP-binding protein	82.6	15.6	33.3
MGA_824	LOCUS_08190	sequence13:476821..477456(-)	partial			WP_010964866.1	ABC transporter ATP-binding protein	80.1	30.6	21.1
MGA_825	LOCUS_08200	sequence13:477459..478337(-)	partial			WP_005814402.1	ABC transporter ATP-binding protein	92.8	46.9	39.2
MGA_826	LOCUS_08210	sequence13:478338..479225(-)	internal_stop_codon	478338..478340(-)		WP_012583011.1	ABC transporter ATP-binding protein	96.9	47.8	20.9
MGA_841	LOCUS_08360	sequence13:486361..486552(-)	internal_stop_codon	486688..486690(-),486358..486360(-),486361..486363(-)		WP_011475835.1	peptide chain release factor N(5)-glutamine methyltransferase	100.0	23.3	50.8
MGA_842	LOCUS_08370	sequence13:486688..486990(-)	internal_stop_codon	486688..486690(-)		WP_011964123.1	peptide chain release factor N(5)-glutamine methyltransferase	95.0	33.0	40.8
MGA_843	LOCUS_08380	sequence13:486990..487631(-)	internal_stop_codon	487647..487649(-)		WP_011183530.1	peptide chain release factor 1	97.7	57.6	59.5
MGA_844	LOCUS_08390	sequence13:487647..488069(-)	internal_stop_codon	487647..487649(-)		WP_011183530.1	peptide chain release factor 1	98.6	38.0	46.4
MGA_845	LOCUS_08400	sequence13:488471..488938(+)	internal_stop_codon	488312..488314(+),488936..488938(+)		WP_010966534.1	asparagine--tRNA ligase	98.1	35.2	48.5
MGA_846	LOCUS_08410	sequence13:488939..489454(+)	internal_stop_codon	489452..489454(+),488936..488938(+)		WP_011166290.1	asparagine--tRNA ligase	100.0	38.5	53.4
MGA_851	LOCUS_08460	sequence13:491046..491324(-)	internal_stop_codon	491046..491048(-),490788..490790(-),490869..490871(-),490839..490841(-)		WP_010874452.1	amino acid permease	67.4	24.4	37.1
MGA_855	LOCUS_08500	sequence13:492531..492950(+)	internal_stop_codon	492948..492950(+)		WP_011166843.1	ribonuclease J	91.4	20.8	45.7
MGA_856	LOCUS_08510	sequence13:493014..494108(+)	internal_stop_codon	494106..494108(+),492948..492950(+)		WP_001831649.1	ribonuclease J	99.5	64.3	38.7
MGA_859	LOCUS_08540	sequence13:494672..495250(+)	partial			WP_011254229.1	diadenylate cyclase CdaA	75.5	51.1	44.5
MGA_860	LOCUS_08550	sequence13:495253..495720(+)	internal_stop_codon	495718..495720(+)		WP_005898141.1	magnesium transporter	91.6	31.6	31.0
MGA_861	LOCUS_08560	sequence13:495775..496143(+)	internal_stop_codon	496141..496143(+),495718..495720(+)		WP_011183114.1	magnesium transporter	99.2	26.1	34.4
MGA_862	LOCUS_08570	sequence13:496156..496509(+)	internal_stop_codon	496141..496143(+),496507..496509(+)		WP_010889738.1	magnesium transporter	86.3	20.0	33.7
MGA_869	LOCUS_08640	sequence13:499381..499596(+)	internal_stop_codon	499369..499371(+),499594..499596(+)		WP_001832557.1	30S ribosomal protein S2	100.0	26.3	46.5
MGA_870	LOCUS_08650	sequence13:499630..500145(+)	internal_stop_codon	499369..499371(+),499594..499596(+)		WP_000111480.1	30S ribosomal protein S2	93.0	60.2	33.9
MGA_874	LOCUS_08690	sequence13:500892..501035(+)	internal_stop_codon	500841..500843(+)		WP_000808106.1	translation elongation factor Ts	93.6	15.5	59.1
MGA_881	LOCUS_08760	sequence13:504935..505264(-)	internal_stop_codon	504935..504937(-),504854..504856(-)		WP_011963183.1	uracil-DNA glycosylase	87.2	43.2	39.6
MGA_882	LOCUS_08770	sequence13:505254..505424(-)	internal_stop_codon	505446..505448(-),505566..505568(-)		WP_011393252.1	phenylalanine--tRNA ligase subunit alpha	92.9	15.6	54.7
MGA_883	LOCUS_08780	sequence13:505566..505784(-)	internal_stop_codon	505887..505889(-),505446..505448(-),505566..505568(-)		WP_011183298.1	phenylalanine--tRNA ligase subunit alpha	98.6	22.0	45.5
MGA_886	LOCUS_08810	sequence13:507682..508668(+)	internal_stop_codon	507619..507621(+)		WP_012972569.1	excinuclease ABC subunit UvrC	99.1	55.9	23.3
MGA_887	LOCUS_08820	sequence13:508795..509265(+)	partial			WP_011182998.1	excinuclease ABC subunit UvrC	92.9	25.3	38.9
MGA_893	LOCUS_08880	sequence13:512451..512642(-)	internal_stop_codon	512688..512690(-),512712..512714(-),512451..512453(-)		WP_011166240.1	FMN-dependent NADH-azoreductase	96.8	30.7	52.5
MGA_895	LOCUS_08900	sequence13:513057..513335(-)	internal_stop_codon	513546..513548(-)		WP_205842899.1	DUF31 family protein	97.8	11.9	56.7
MGA_896	LOCUS_08910	sequence13:513546..514169(-)	internal_stop_codon	513546..513548(-),514233..514235(-)		WP_205842899.1	DUF31 family protein	58.0	16.1	34.4
MGA_899	LOCUS_08940	sequence13:515763..516185(-)	internal_stop_codon	516330..516332(-)		WP_205842899.1	DUF31 family protein	98.6	18.1	47.1
MGA_903	LOCUS_08980	sequence13:518545..518955(-)	internal_stop_codon	519220..519222(-),518545..518547(-)		WP_010874786.1	type I glyceraldehyde-3-phosphate dehydrogenase	100.0	40.4	66.9
MGA_904	LOCUS_08990	sequence13:519220..519474(-)	internal_stop_codon	519220..519222(-)		WP_003421962.1	type I glyceraldehyde-3-phosphate dehydrogenase	100.0	25.1	71.4
MGA_910	LOCUS_09050	sequence13:522990..523895(-)	partial			WP_011166854.1	DNA polymerase I	84.4	28.3	38.4
MGA_912	LOCUS_09070	sequence13:524482..526632(-)	internal_stop_codon	524482..524484(-)		WP_011166855.1	DNA polymerase III subunit alpha	97.8	72.3	36.5
MGA_916	LOCUS_09110	sequence13:528575..529156(-)	internal_stop_codon	529199..529201(-)		WP_005898558.1	UvrD-helicase domain-containing protein	93.3	26.7	31.0
MGA_917	LOCUS_09120	sequence13:529199..529750(-)	internal_stop_codon	530000..530002(-),529199..529201(-),529772..529774(-)		WP_005898558.1	UvrD-helicase domain-containing protein	93.4	22.5	38.2
MGA_918	LOCUS_09130	sequence13:530330..530779(-)	internal_stop_codon	530330..530332(-)		WP_002363179.1	DNA helicase PcrA	87.9	17.4	46.6
MGA_926	LOCUS_09210	sequence13:534233..534784(-)	internal_stop_codon	534926..534928(-),534215..534217(-),534233..534235(-)		WP_000524657.1	redox-regulated ATPase YchF	99.5	49.7	41.5
MGA_927	LOCUS_09220	sequence13:534926..535120(-)	internal_stop_codon	534926..534928(-)		WP_013096225.1	redox-regulated ATPase YchF	100.0	17.6	64.1
MGA_930	LOCUS_09250	sequence13:537926..538180(+)	internal_stop_codon	537707..537709(+),537899..537901(+),538178..538180(+),538328..538330(+)		WP_012048370.1	glycine--tRNA ligase	94.0	17.1	82.3
MGA_931	LOCUS_09260	sequence13:538481..538729(+)	internal_stop_codon	538727..538729(+),538328..538330(+)		WP_011166648.1	glycine--tRNA ligase	98.8	17.5	54.3
MGA_932	LOCUS_09270	sequence13:538843..539898(+)	partial			WP_001831005.1	DNA primase	98.3	59.0	37.1
MGA_935	LOCUS_09300	sequence13:541399..541644(+)	internal_stop_codon	541642..541644(+),541378..541380(+),541366..541368(+),541645..541647(+)		WP_002985187.1	RNA polymerase sigma factor RpoD	100.0	21.1	54.3
MGA_936	LOCUS_09310	sequence13:541711..542001(+)	frameshift,internal_stop_codon	541642..541644(+),541999..542001(+),541645..541647(+)	542046	WP_011183167.1	sigma-70 family RNA polymerase sigma factor	100.0	19.5	54.2
MGA_939	LOCUS_09340	sequence13:543132..543605(+)	internal_stop_codon	543837..543839(+),543603..543605(+)		WP_000877334.1	cardiolipin synthase	97.5	31.2	29.4
MGA_940	LOCUS_09350	sequence13:544047..544313(+)	internal_stop_codon	543906..543908(+),543837..543839(+),544311..544313(+)		WP_003243311.1	cardiolipin synthase	97.7	17.8	47.7
MGA_951	LOCUS_09460	sequence13:555897..556082(+)	frameshift,internal_stop_codon	556171..556173(+)	555854,555698,555806,556073	WP_042733551.1	IS3 family transposase	98.4	14.1	46.7
MGA_955	LOCUS_09500	sequence13:559208..559375(-)	internal_stop_codon	559208..559210(-)		WP_013448152.1	phosphotransferase	94.5	21.8	57.7
MGA_960	LOCUS_09550	sequence13:566016..567173(-)	internal_stop_codon	566016..566018(-),567237..567239(-)		WP_011166465.1	dihydrolipoyl dehydrogenase	99.5	66.1	41.0
MGA_961	LOCUS_09560	sequence13:567237..567818(-)	internal_stop_codon	567237..567239(-)		WP_011182939.1	dihydrolipoyl dehydrogenase	100.0	28.1	41.5
MGA_962	LOCUS_09570	sequence13:567901..568251(-)	internal_stop_codon	568399..568401(-),567901..567903(-)		WP_000863430.1	pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase	94.8	25.6	53.6
MGA_963	LOCUS_09580	sequence13:568399..568743(-)	internal_stop_codon	568399..568401(-)		WP_000863430.1	pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase	99.1	27.3	34.2
MGA_964	LOCUS_09590	sequence13:568758..569561(-)	internal_stop_codon	569667..569669(-),569586..569588(-)		WP_011182937.1	alpha-ketoacid dehydrogenase subunit beta	99.3	80.5	57.4
MGA_965	LOCUS_09600	sequence13:570302..570553(-)	internal_stop_codon	570296..570298(-),570077..570079(-),570584..570586(-),570302..570304(-),570263..570265(-)		WP_010874749.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	100.0	23.2	49.4
MGA_966	LOCUS_09610	sequence13:570584..570868(-)	internal_stop_codon	570302..570304(-),570296..570298(-),570584..570586(-)		WP_011182936.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	93.6	22.7	46.6
MGA_970	LOCUS_09650	sequence13:572309..573340(-)	internal_stop_codon	573347..573349(-),573548..573550(-)		WP_010874750.1	FAD-dependent oxidoreductase	97.1	69.5	44.7
MGA_971	LOCUS_09660	sequence13:573548..573688(-)	internal_stop_codon	573347..573349(-),573548..573550(-)		WP_011166460.1	FAD-dependent oxidoreductase	100.0	10.1	58.7
MGA_974	LOCUS_09690	sequence13:575843..576040(-)	internal_stop_codon	576059..576061(-)		WP_000453282.1	dihydroxyacetone kinase subunit DhaL	80.0	27.6	60.4
MGA_975	LOCUS_09700	sequence13:576059..576454(-)	internal_stop_codon	576059..576061(-)		WP_001830509.1	dihydroxyacetone kinase subunit DhaL	84.7	56.5	52.7
MGA_976	LOCUS_09710	sequence13:576451..576966(-)	internal_stop_codon	577003..577005(-)		WP_011166915.1	dihydroxyacetone kinase subunit DhaK	95.3	49.4	53.0
MGA_977	LOCUS_09720	sequence13:577003..577428(-)	internal_stop_codon	577003..577005(-)		WP_011166915.1	dihydroxyacetone kinase subunit DhaK	99.3	42.8	63.4
MGA_978	LOCUS_09730	sequence13:577627..577776(-)	internal_stop_codon	577909..577911(-),577978..577980(-)		WP_012027843.1	MIP/aquaporin family protein	98.0	20.8	57.1
MGA_979	LOCUS_09740	sequence13:578399..578578(-)	internal_stop_codon	578273..578275(-),578693..578695(-),578822..578824(-),578399..578401(-)		WP_011166455.1	glycerol kinase GlpK	100.0	11.7	55.9
MGA_980	LOCUS_09750	sequence13:578894..579061(-)	internal_stop_codon	579275..579277(-),578894..578896(-),579083..579085(-),579350..579352(-),578693..578695(-),578822..578824(-),579182..579184(-),579266..579268(-)		WP_004556718.1	glycerol kinase GlpK	100.0	11.0	70.9
MGA_981	LOCUS_09760	sequence13:579647..579778(-)	internal_stop_codon	579620..579622(-),579647..579649(-),579470..579472(-),579419..579421(-),579512..579514(-)		WP_011166455.1	glycerol kinase GlpK	93.0	7.9	55.0
MGA_982	LOCUS_09770	sequence13:579787..580458(-)	internal_stop_codon	580492..580494(-),580720..580722(-)		WP_013447578.1	type 2 glycerol-3-phosphate oxidase	95.5	55.0	61.5
MGA_983	LOCUS_09780	sequence13:580492..580668(-)	internal_stop_codon	580492..580494(-),580720..580722(-)		WP_013447578.1	type 2 glycerol-3-phosphate oxidase	98.3	14.7	57.9
MGA_984	LOCUS_09790	sequence13:580720..580941(-)	internal_stop_codon	580492..580494(-),580720..580722(-)		WP_010874408.1	type 2 glycerol-3-phosphate oxidase	83.6	15.9	60.7
MGA_986	LOCUS_09810	sequence13:581470..581964(-)	internal_stop_codon	581470..581472(-)		WP_011166475.1	30S ribosomal protein S4	97.6	77.9	58.0
MGA_990	LOCUS_09850	sequence13:584553..584729(-)	frameshift,internal_stop_codon	584553..584555(-)	584507	WP_042733551.1	IS3 family transposase	96.6	13.4	50.9
MGA_991	LOCUS_09860	sequence13:585399..585830(-)	internal_stop_codon	585879..585881(-)		WP_011166415.1	Eco47II family restriction endonuclease	96.5	54.3	63.8
MGA_992	LOCUS_09870	sequence13:585879..586172(-)	internal_stop_codon	585879..585881(-)		WP_011166415.1	Eco47II family restriction endonuclease	99.0	37.8	68.8
MGA_993	LOCUS_09880	sequence13:586285..587034(-)	internal_stop_codon	586285..586287(-),587041..587043(-)		WP_011166416.1	DNA cytosine methyltransferase	99.2	72.4	72.1
MGA_994	LOCUS_09890	sequence13:587041..587175(-)	internal_stop_codon	587041..587043(-)		WP_011166416.1	DNA cytosine methyltransferase	90.9	11.7	65.0
MGA_995	LOCUS_09900	sequence13:588369..589016(+)	internal_stop_codon	588219..588221(+)		WP_002263020.1	DNA adenine methylase	99.5	76.1	44.0
MGA_1002	LOCUS_09970	sequence13:594636..595094(+)	internal_stop_codon	595092..595094(+)		WP_001892557.1	hypothetical protein	80.3	51.0	32.8
MGA_1006	LOCUS_10010	sequence13:597176..597967(+)	partial			WP_201781412.1	site-specific DNA-methyltransferase	94.3	38.8	50.8
MGA_1007	LOCUS_10020	sequence13:597998..598816(+)	partial			WP_010951099.1	DNA methyltransferase	79.4	29.6	35.3
MGA_1008	LOCUS_10030	sequence13:598809..599630(+)	internal_stop_codon	599628..599630(+)		WP_034260979.1	DEAD/DEAH box helicase family protein	84.6	25.6	44.2
MGA_1009	LOCUS_10040	sequence13:599655..601424(+)	internal_stop_codon	599628..599630(+)		WP_034260979.1	DEAD/DEAH box helicase family protein	98.8	67.7	35.6
MGA_1011	LOCUS_10060	sequence13:603316..603489(-)	internal_stop_codon	603544..603546(-),603511..603513(-),603316..603318(-),603295..603297(-)		WP_016361990.1	IS256 family transposase	96.5	13.8	61.8
MGA_1012	LOCUS_10070	sequence13:603544..603810(-)	internal_stop_codon	603544..603546(-),603991..603993(-),603511..603513(-),603841..603843(-),603295..603297(-),603316..603318(-),603811..603813(-)		WP_072530700.1	IS256 family transposase	100.0	21.5	54.5
MGA_1014	LOCUS_10090	sequence13:603991..604323(-)	internal_stop_codon	603991..603993(-),603841..603843(-),603811..603813(-)		WP_085938409.1	IS256 family transposase	100.0	27.8	44.5
MGA_1021	LOCUS_10120	sequence13:607094..607924(+)	frameshift,internal_stop_codon	607088..607090(+),607089..607091(+)	606905,606908	WP_009897920.1	DUF4116 domain-containing protein	31.9	16.6	39.8
MGA_1025	LOCUS_10160	sequence13:610365..611594(-)	partial			WP_138431871.1	AAA family ATPase	86.8	70.1	40.2
MGA_1028	LOCUS_10190	sequence13:614257..614490(-)	internal_stop_codon	614500..614502(-)		WP_001074749.1	phosphoglycerate kinase	98.7	19.2	63.2
MGA_1029	LOCUS_10200	sequence13:614500..614919(-)	internal_stop_codon	615031..615033(-),614500..614502(-)		WP_003700618.1	phosphoglycerate kinase	100.0	35.0	55.7
MGA_1030	LOCUS_10210	sequence13:615031..615444(-)	internal_stop_codon	615031..615033(-)		WP_002357094.1	phosphoglycerate kinase	99.3	34.3	62.5
MGA_1032	LOCUS_10230	sequence13:616755..617477(-)	internal_stop_codon	616755..616757(-)		WP_011183071.1	6-phosphofructokinase	99.6	73.7	53.1
MGA_1034	LOCUS_10250	sequence13:618312..618860(-)	internal_stop_codon	618912..618914(-),619098..619100(-),619119..619121(-)		WP_011183252.1	valine--tRNA ligase	86.8	19.7	30.2
MGA_1036	LOCUS_10270	sequence13:619188..619352(-)	internal_stop_codon	618912..618914(-),619605..619607(-),619509..619511(-),619581..619583(-),619362..619364(-),619119..619121(-),619479..619481(-),619626..619628(-),619098..619100(-),619584..619586(-),619188..619190(-),619440..619442(-),619560..619562(-)		WP_002899695.1	valine--tRNA ligase	100.0	6.1	68.5
MGA_1037	LOCUS_10280	sequence13:619731..620213(-)	internal_stop_codon	620415..620417(-),619605..619607(-),619509..619511(-),619581..619583(-),620451..620453(-),620457..620459(-),619731..619733(-),619626..619628(-),619479..619481(-),619584..619586(-),620277..620279(-),619440..619442(-),619560..619562(-)		WP_012583452.1	valine--tRNA ligase	100.0	18.3	41.0
MGA_1038	LOCUS_10290	sequence13:620577..620726(-)	internal_stop_codon	620457..620459(-),620577..620579(-),620451..620453(-),620415..620417(-)		WP_002352358.1	valine--tRNA ligase	93.9	5.2	67.4
MGA_1049	LOCUS_10400	sequence13:635680..636336(-)	partial			WP_010869633.1	potassium channel protein MjK1	90.8	61.9	29.6
MGA_1050	LOCUS_10410	sequence13:636546..636863(-)	internal_stop_codon	636546..636548(-),636408..636410(-)		WP_013447978.1	potassium transporter TrkG	89.5	17.6	39.4
MGA_1051	LOCUS_10420	sequence13:637446..637763(-)	internal_stop_codon	637446..637448(-),637890..637892(-)		WP_010874816.1	potassium transporter TrkG	95.2	20.0	34.5
MGA_1058	LOCUS_10490	sequence13:642863..643636(-)	internal_stop_codon	643646..643648(-)		WP_010870059.1	M42 family metallopeptidase	93.8	69.7	35.0
MGA_1059	LOCUS_10500	sequence13:643646..643924(-)	internal_stop_codon	643646..643648(-)		WP_012583847.1	M42 family metallopeptidase	79.3	20.4	42.5
MGA_1069	LOCUS_10600	sequence13:651931..652665(-)	internal_stop_codon	651931..651933(-),652714..652716(-),652696..652698(-)		WP_011166468.1	DUF31 family protein	96.3	36.7	29.1
MGA_1071	LOCUS_10620	sequence13:653718..654524(+)	frameshift,internal_stop_codon	654522..654524(+)	654169	WP_009897920.1	DUF4116 domain-containing protein	53.7	26.3	32.9
MGA_1072	LOCUS_10630	sequence13:654570..655241(+)	internal_stop_codon	655239..655241(+),655284..655286(+),654522..654524(+)		WP_009897920.1	DUF4116 domain-containing protein	99.1	41.8	35.7
MGA_1074	LOCUS_10650	sequence13:655632..655991(+)	internal_stop_codon	656196..656198(+),655614..655616(+),655989..655991(+)		WP_009897920.1	DUF4116 domain-containing protein	98.3	26.7	33.8
MGA_1079	LOCUS_10700	sequence13:658139..659443(+)	frameshift,internal_stop_codon	658121..658123(+)	658129,658099,658147,658117,658142	WP_009897920.1	DUF4116 domain-containing protein	62.7	60.3	32.4
MGA_1083	LOCUS_10740	sequence13:660723..661223(+)	internal_stop_codon	661221..661223(+),660705..660707(+)		WP_009895219.1	DUF4116 domain-containing protein	98.8	40.5	26.7
MGA_1084	LOCUS_10750	sequence13:661239..662345(+)	internal_stop_codon	661221..661223(+)		WP_009897920.1	DUF4116 domain-containing protein	56.2	42.4	31.6
MGA_1085	LOCUS_10760	sequence13:662568..664091(+)	internal_stop_codon	664359..664361(+),664089..664091(+)		WP_009897920.1	DUF4116 domain-containing protein	79.1	73.5	30.8
MGA_1092	LOCUS_10830	sequence13:668802..669014(-)	internal_stop_codon	668802..668804(-),669108..669110(-)		WP_011183074.1	threonine--tRNA ligase	98.6	10.7	68.1
MGA_1093	LOCUS_10840	sequence13:669108..669614(-)	internal_stop_codon	669759..669761(-),669108..669110(-),669810..669812(-),669627..669629(-)		WP_011183074.1	threonine--tRNA ligase	98.8	26.2	54.4
MGA_1094	LOCUS_10850	sequence13:669810..670238(-)	internal_stop_codon	669759..669761(-),669810..669812(-),669627..669629(-)		WP_000435143.1	threonine--tRNA ligase	99.3	21.2	42.1
MGA_1095	LOCUS_10860	sequence13:670225..670923(-)	internal_stop_codon	670963..670965(-)		WP_084322456.1	tryptophan--tRNA ligase	96.1	64.3	45.1
MGA_1096	LOCUS_10870	sequence13:670963..671238(-)	internal_stop_codon	670963..670965(-)		WP_012048270.1	tryptophan--tRNA ligase	94.5	25.6	47.7
MGA_1099	LOCUS_10900	sequence13:673840..674364(-)	partial			WP_010940189.1	DNA-directed RNA polymerase subunit beta'	77.6	9.6	41.2
MGA_1100	LOCUS_10910	sequence13:674725..675486(-)	internal_stop_codon	674725..674727(-),675565..675567(-)		WP_000567939.1	DNA-directed RNA polymerase subunit beta'	97.6	19.2	55.2
MGA_1102	LOCUS_10930	sequence13:675832..676758(-)	internal_stop_codon	676906..676908(-),675565..675567(-),676816..676818(-)		WP_011074679.1	DNA-directed RNA polymerase subunit beta'	76.3	17.6	44.1
MGA_1103	LOCUS_10940	sequence13:676906..677184(-)	internal_stop_codon	677203..677205(-),676816..676818(-),676906..676908(-)		WP_011963311.1	DNA-directed RNA polymerase subunit beta'	98.9	6.3	63.7
MGA_1104	LOCUS_10950	sequence13:677203..677340(-)	internal_stop_codon	677203..677205(-)		WP_012869935.1	DNA-directed RNA polymerase subunit beta'	73.3	2.0	69.7
MGA_1106	LOCUS_10970	sequence13:678527..678997(-)	internal_stop_codon	678527..678529(-)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	99.4	12.0	74.2
MGA_1107	LOCUS_10980	sequence13:679472..680686(-)	internal_stop_codon	680687..680689(-),679472..679474(-)		WP_011183496.1	DNA-directed RNA polymerase subunit beta	99.8	31.1	53.6
MGA_1108	LOCUS_10990	sequence13:680687..681052(-)	internal_stop_codon	680687..680689(-)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	59.5	5.6	37.5
MGA_1109	LOCUS_11000	sequence13:681350..681895(-)	internal_stop_codon	681350..681352(-)		WP_002936570.1	DNA-directed RNA polymerase subunit beta	81.2	11.8	34.7
MGA_1112	LOCUS_11030	sequence13:684631..685650(+)	internal_stop_codon	685648..685650(+)		WP_011167160.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	98.2	53.3	49.0
MGA_1113	LOCUS_11040	sequence13:685684..686463(+)	internal_stop_codon	685648..685650(+)		WP_011167160.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	98.1	42.6	51.1
MGA_1115	LOCUS_11060	sequence13:686930..688510(-)	internal_stop_codon	688556..688558(-)		WP_000370122.1	Tex family protein	98.9	73.2	44.1
MGA_1116	LOCUS_11070	sequence13:688556..689080(-)	internal_stop_codon	688556..688558(-)		WP_000370122.1	Tex family protein	94.3	22.8	42.1
MGA_1131	LOCUS_11220	sequence13:697426..697614(-)	internal_stop_codon	697426..697428(-),697651..697653(-)		WP_011122039.1	2-hydroxyacid dehydrogenase	88.7	16.6	45.5
MGA_1132	LOCUS_11230	sequence13:697651..698064(-)	internal_stop_codon	697426..697428(-),697651..697653(-),698077..698079(-)		WP_000762229.1	D-lactate dehydrogenase	97.8	39.5	46.3
MGA_1138	LOCUS_11290	sequence13:700527..701708(-)	internal_stop_codon	701901..701903(-)		WP_011166794.1	F0F1 ATP synthase subunit beta	98.0	83.7	76.1
MGA_1139	LOCUS_11300	sequence13:702200..703456(-)	internal_stop_codon	702008..702010(-),702200..702202(-)		WP_011166795.1	ATP F0F1 synthase subunit alpha	99.3	80.6	63.1
MGA_1141	LOCUS_11320	sequence13:703866..704882(-)	internal_stop_codon	704916..704918(-)		WP_011166796.1	hypothetical protein	97.3	40.4	27.9
MGA_1144	LOCUS_11350	sequence13:706419..707027(-)	internal_stop_codon	706419..706421(-)		WP_011166798.1	hypothetical protein	99.0	68.3	43.5
MGA_1145	LOCUS_11360	sequence13:707027..707353(-)	partial			WP_011166799.1	DUF2714 domain-containing protein	89.8	59.1	35.4
MGA_1149	LOCUS_11400	sequence13:709066..709446(-)	internal_stop_codon	709684..709686(-)		WP_011166801.1	DUF31 family protein	87.3	12.9	56.2
MGA_1150	LOCUS_11410	sequence13:710470..711297(-)	internal_stop_codon	710470..710472(-)		WP_020862862.1	DUF31 family protein	83.6	27.5	34.7
MGA_1152	LOCUS_11430	sequence13:712455..712727(-)	internal_stop_codon	712455..712457(-)		WP_011166802.1	putative immunoglobulin-blocking virulence protein	97.8	11.7	50.0
MGA_1154	LOCUS_11450	sequence13:713603..714286(-)	internal_stop_codon	714293..714295(-),714314..714316(-)		WP_011166808.1	putative immunoglobulin-blocking virulence protein	94.3	28.3	46.8
MGA_1155	LOCUS_11460	sequence13:714314..714664(-)	internal_stop_codon	714740..714742(-),714293..714295(-),714314..714316(-)		WP_011166804.1	putative immunoglobulin-blocking virulence protein	99.1	15.9	52.9
MGA_1157	LOCUS_11480	sequence13:716924..717295(-)	internal_stop_codon	717560..717562(-),716897..716899(-),717377..717379(-),716789..716791(-),716924..716926(-),716675..716677(-),716840..716842(-)		WP_205842899.1	DUF31 family protein	99.2	13.0	32.6
MGA_1162	LOCUS_11530	sequence13:720570..721247(-)	internal_stop_codon	720570..720572(-)		WP_011387230.1	putative immunoglobulin-blocking virulence protein	97.8	27.7	29.1
MGA_1167	LOCUS_11580	sequence13:724846..725010(-)	internal_stop_codon	724846..724848(-)		WP_140834635.1	Ig-like domain-containing protein	96.3	2.2	63.5
MGA_1168	LOCUS_11590	sequence13:726166..726351(-)	internal_stop_codon	726409..726411(-),726373..726375(-),726166..726168(-),726082..726084(-)		WP_199567761.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	100.0	2.5	63.9
MGA_1169	LOCUS_11600	sequence13:726409..726783(-)	internal_stop_codon	726835..726837(-),726409..726411(-),726373..726375(-),726166..726168(-),727033..727035(-),727066..727068(-)		WP_013389627.1	discoidin domain-containing protein	99.2	6.3	27.2
MGA_1170	LOCUS_11610	sequence13:726835..726993(-)	internal_stop_codon	726835..726837(-),727135..727137(-),727093..727095(-),727033..727035(-),727066..727068(-)		WP_000515226.1	LPXTG-anchored adhesin/beta-galactosidase BgaA	100.0	2.3	57.7
MGA_1175	LOCUS_11660	sequence13:728980..729471(-)	partial			WP_209611766.1	restriction endonuclease subunit S	90.8	39.1	35.8
MGA_1176	LOCUS_11670	sequence13:730293..730973(+)	internal_stop_codon	730191..730193(+)		WP_004116510.1	DNA-binding protein	99.1	75.7	74.1
MGA_1177	LOCUS_11680	sequence13:731932..732213(+)	internal_stop_codon	732280..732282(+),732211..732213(+)		WP_011068835.1	type I restriction-modification system subunit M	100.0	9.9	39.8
MGA_1178	LOCUS_11690	sequence13:732400..732858(+)	internal_stop_codon	732280..732282(+),732856..732858(+),732211..732213(+)		WP_011068835.1	type I restriction-modification system subunit M	100.0	17.8	52.0
MGA_1179	LOCUS_11700	sequence13:733994..734287(+)	internal_stop_codon	733979..733981(+),734285..734287(+)		WP_002287733.1	restriction endonuclease subunit S	88.7	20.8	42.5
MGA_1180	LOCUS_11710	sequence13:734681..735163(+)	internal_stop_codon	734582..734584(+)		WP_013390019.1	restriction endonuclease subunit S	52.5	21.1	42.5
MGA_1183	LOCUS_11740	sequence13:736155..736601(+)	frameshift,internal_stop_codon	736065..736067(+)	736577	WP_000228826.1	type I restriction endonuclease subunit R	95.3	14.3	43.5
MGA_1184	LOCUS_11750	sequence13:737148..737549(+)	partial			WP_011068838.1	HsdR family type I site-specific deoxyribonuclease	95.5	11.9	34.6
MGA_1186	LOCUS_11770	sequence13:738309..738578(-)	internal_stop_codon	738819..738821(-),738639..738641(-)		WP_012028462.1	site-specific integrase	96.6	27.9	70.9
MGA_1187	LOCUS_11780	sequence13:738639..738791(-)	internal_stop_codon	738819..738821(-),738639..738641(-)		WP_007058548.1	site-specific integrase	100.0	16.2	68.0
MGA_1188	LOCUS_11790	sequence13:738819..739070(-)	internal_stop_codon	738639..738641(-),738819..738821(-),739116..739118(-),739185..739187(-)		WP_012028462.1	site-specific integrase	100.0	26.9	48.2
MGA_1192	LOCUS_11830	sequence13:740362..740907(-)	partial			WP_013390019.1	restriction endonuclease subunit S	46.4	21.1	39.1
MGA_1199	LOCUS_11900	sequence13:746013..746480(+)	frameshift,internal_stop_codon	746659..746661(+),746563..746565(+),746478..746480(+),746629..746631(+)	746525	WP_002389929.1	IS256 family transposase	93.5	36.3	33.1
MGA_1200	LOCUS_11910	sequence13:746784..746927(+)	frameshift,internal_stop_codon	747175..747177(+),746659..746661(+),746926..746928(+),747154..747156(+),746959..746961(+),746629..746631(+)	746564,746790	WP_072530700.1	IS256 family transposase	97.9	11.2	60.9
MGA_1201	LOCUS_11920	sequence13:746982..747155(+)	frameshift,internal_stop_codon	747175..747177(+),747154..747156(+),746959..746961(+),746926..746928(+)	746790	WP_016361990.1	IS256 family transposase	96.5	13.8	60.0
MGA_1214	LOCUS_12050	sequence13:757663..758820(-)	partial			WP_020862721.1	endopeptidase La	97.1	47.1	54.5
MGA_1218	LOCUS_12090	sequence13:761129..761731(+)	internal_stop_codon	761729..761731(+)		WP_013447835.1	NAD(+) synthase	90.5	75.1	45.9
MGA_1224	LOCUS_12150	sequence13:765109..765363(+)	internal_stop_codon	765361..765363(+),764854..764856(+)		WP_003242517.1	cyclic-di-AMP phosphodiesterase GdpP	98.8	12.4	42.2
MGA_1230	LOCUS_12210	sequence13:767286..767666(+)	internal_stop_codon	767235..767237(+)		WP_011182981.1	replicative DNA helicase	95.2	27.5	52.8
MGA_1231	LOCUS_12220	sequence13:767737..768138(+)	partial			WP_004080781.1	hemolysin family protein	85.0	25.1	41.7
MGA_1238	LOCUS_12290	sequence13:771936..772739(-)	partial			WP_011182983.1	ECF transporter S component	30.3	26.2	46.9
MGA_1239	LOCUS_12300	sequence13:773064..773522(-)	partial			WP_010880855.1	CTP synthase	99.3	28.2	44.4
MGA_1240	LOCUS_12310	sequence13:773853..774695(-)	internal_stop_codon	773853..773855(-)		WP_000170458.1	CTP synthase	91.8	48.2	47.7
MGA_1242	LOCUS_12330	sequence13:774992..776257(-)	internal_stop_codon	774992..774994(-)		WP_010874985.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	99.8	83.1	50.5
MGA_1247	LOCUS_12380	sequence13:778853..779200(-)	internal_stop_codon	778853..778855(-),779246..779248(-),779270..779272(-)		WP_010874414.1	ABC transporter permease	98.3	38.8	36.0
MGA_1248	LOCUS_12390	sequence13:779397..780011(-)	partial			WP_005694014.1	spermidine/putrescine ABC transporter permease PotB	90.2	67.8	29.4
MGA_1250	LOCUS_12410	sequence13:780613..780987(-)	internal_stop_codon	780613..780615(-),781045..781047(-)		WP_010874412.1	ATP-binding cassette domain-containing protein	97.6	21.6	59.5
MGA_1251	LOCUS_12420	sequence13:781405..781590(-)	internal_stop_codon	781405..781407(-)		WP_011183409.1	ABC transporter ATP-binding protein	88.5	15.4	61.1
MGA_1254	LOCUS_12450	sequence13:782559..782720(-)	internal_stop_codon	782559..782561(-)		WP_041272405.1	single-stranded DNA-binding protein	100.0	40.8	52.8
MGA_1257	LOCUS_12480	sequence13:783415..783567(+)	internal_stop_codon	783565..783567(+)		WP_000246611.1	type I DNA topoisomerase	98.0	6.5	59.2
MGA_1258	LOCUS_12490	sequence13:783832..784071(+)	internal_stop_codon	784069..784071(+),783565..783567(+),784360..784362(+)		WP_003598643.1	type I DNA topoisomerase	74.7	8.1	50.8
MGA_1260	LOCUS_12510	sequence13:784534..785028(+)	internal_stop_codon	785026..785028(+),784360..784362(+)		WP_000681408.1	type I DNA topoisomerase	94.5	21.2	35.3
MGA_1263	LOCUS_12540	sequence13:787070..787681(-)	internal_stop_codon	787754..787756(-),787685..787687(-)		WP_002494685.1	phosphopentomutase	93.6	48.0	49.7
MGA_1264	LOCUS_12550	sequence13:787754..787984(-)	internal_stop_codon	788114..788116(-),787754..787756(-),787991..787993(-),787685..787687(-)		WP_003230444.1	phosphopentomutase	100.0	18.8	59.2
MGA_1266	LOCUS_12570	sequence13:788384..788782(-)	partial			WP_010922714.1	M protein	90.9	26.2	25.2
MGA_1271	LOCUS_12620	sequence13:791092..791586(-)	internal_stop_codon	791092..791094(-)		WP_010966431.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	94.5	66.7	32.1
MGA_1272	LOCUS_12630	sequence13:791678..792130(-)	internal_stop_codon	792341..792343(-),792281..792283(-),792131..792133(-)		WP_012048360.1	cysteine--tRNA ligase	81.3	29.0	30.4
MGA_1273	LOCUS_12640	sequence13:792458..792820(-)	internal_stop_codon	792341..792343(-),792281..792283(-),792458..792460(-)		WP_009895184.1	cysteine--tRNA ligase	99.2	25.6	39.5
MGA_1274	LOCUS_12650	sequence13:792911..793558(+)	internal_stop_codon	793556..793558(+)		WP_003227570.1	arginine--tRNA ligase	100.0	37.4	40.7
MGA_1275	LOCUS_12660	sequence13:793604..794563(+)	internal_stop_codon	793556..793558(+)		WP_003227570.1	arginine--tRNA ligase	94.4	56.3	40.6
MGA_1277	LOCUS_12680	sequence13:795158..795547(+)	internal_stop_codon	795545..795547(+),795077..795079(+)		WP_010964145.1	class II fructose-1,6-bisphosphate aldolase	100.0	44.6	63.6
MGA_1279	LOCUS_12700	sequence13:796531..797019(+)	internal_stop_codon	797017..797019(+)		WP_011182903.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	75.9	19.4	73.2
MGA_1280	LOCUS_12710	sequence13:797155..798561(+)	internal_stop_codon	797017..797019(+)		WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	99.8	71.9	52.7
MGA_1282	LOCUS_12730	sequence13:800747..800995(+)	internal_stop_codon	800717..800719(+),800642..800644(+)		WP_011943280.1	SsrA-binding protein SmpB	91.5	50.0	49.3
MGA_1292	LOCUS_12830	sequence13:806505..806996(-)	internal_stop_codon	806295..806297(-),806505..806507(-),806364..806366(-)		WP_013390210.1	beta-N-acetylglucosaminidase domain-containing protein	89.6	7.7	33.8
MGA_1305	LOCUS_12960	sequence13:816954..817187(+)	internal_stop_codon	817305..817307(+),817311..817313(+),817185..817187(+)		WP_011167158.1	aspartate--ammonia ligase	100.0	23.3	61.0
MGA_1306	LOCUS_12970	sequence13:817404..817886(+)	internal_stop_codon	817305..817307(+),817311..817313(+),817185..817187(+),817884..817886(+)		WP_011167158.1	aspartate--ammonia ligase	96.9	47.5	60.6
MGA_1314	LOCUS_13050	sequence13:825990..826229(-)	internal_stop_codon	826257..826259(-),825990..825992(-)		WP_011475757.1	methionine adenosyltransferase	100.0	19.9	57.0
MGA_1315	LOCUS_13060	sequence13:826257..826607(-)	internal_stop_codon	826620..826622(-),826257..826259(-),825990..825992(-)		WP_011183137.1	methionine adenosyltransferase	100.0	30.8	68.1
MGA_1316	LOCUS_13070	sequence13:826620..827072(-)	internal_stop_codon	826620..826622(-)		WP_011183137.1	methionine adenosyltransferase	100.0	41.6	52.2
MGA_1344	LOCUS_13350	sequence13:851137..851400(+)	internal_stop_codon	851398..851400(+)		WP_011475561.1	fructose-specific PTS transporter subunit EIIC	94.3	12.6	32.9
MGA_1345	LOCUS_13360	sequence13:851731..852573(+)	internal_stop_codon	852847..852849(+),852655..852657(+),852571..852573(+)		WP_010874435.1	fructose-specific PTS transporter subunit EIIC	99.6	38.9	44.2
MGA_1346	LOCUS_13370	sequence13:852685..852849(+)	internal_stop_codon	852847..852849(+),852655..852657(+),852571..852573(+)		WP_010922158.1	fructose-specific PTS transporter subunit EIIC	96.3	8.5	57.1
MGA_1351	LOCUS_13420	sequence13:856359..856862(-)	partial			WP_000455839.1	MurR/RpiR family transcriptional regulator	97.0	52.0	27.4
MGA_1357	LOCUS_13480	sequence13:859970..860314(-)	internal_stop_codon	860357..860359(-)		WP_003640703.1	translation elongation factor 4	99.1	18.5	61.1
MGA_1358	LOCUS_13490	sequence13:860357..860734(-)	internal_stop_codon	861005..861007(-),860357..860359(-),860798..860800(-)		WP_013447641.1	translation elongation factor 4	100.0	20.8	60.8
MGA_1359	LOCUS_13500	sequence13:861005..861778(-)	internal_stop_codon	861005..861007(-),860798..860800(-)		WP_013447641.1	translation elongation factor 4	100.0	43.2	68.7
MGA_1365	LOCUS_13560	sequence13:865139..865405(+)	internal_stop_codon	865403..865405(+),865115..865117(+)		WP_000515824.1	beta-N-acetylglucosaminidase domain-containing protein	83.0	2.6	45.2
MGA_1366	LOCUS_13570	sequence13:865637..865933(+)	internal_stop_codon	866159..866161(+),865943..865945(+),865403..865405(+),865931..865933(+),865583..865585(+)		WP_013390216.1	discoidin domain-containing protein	100.0	6.0	44.4
MGA_1368	LOCUS_13590	sequence13:866459..867505(+)	internal_stop_codon	866258..866260(+)		WP_013390216.1	discoidin domain-containing protein	51.4	10.0	31.8
MGA_1371	LOCUS_13620	sequence13:869552..869782(+)	partial			WP_011166919.1	LacI family DNA-binding transcriptional regulator	86.8	58.4	39.4
MGA_1374	LOCUS_13650	sequence13:871866..872360(+)	internal_stop_codon	872358..872360(+),872406..872408(+)		WP_011101610.1	deoxyribonuclease IV	100.0	55.7	41.8
MGA_1386	LOCUS_13770	sequence13:883925..884191(+)	internal_stop_codon	884189..884191(+),883901..883903(+)		WP_011109002.1	family 20 glycosylhydrolase	65.9	8.8	55.2
MGA_1391	LOCUS_13820	sequence13:887362..888573(+)	partial			WP_003437564.1	DUF4116 domain-containing protein	43.7	53.6	22.9
MGA_1395	LOCUS_13860	sequence13:893007..893144(-)	internal_stop_codon	893007..893009(-)		WP_092731919.1	chromosome segregation protein SMC	100.0	3.8	64.4
MGA_1397	LOCUS_13880	sequence13:893829..894260(-)	internal_stop_codon	894354..894356(-)		WP_012047867.1	phosphate acyltransferase PlsX	95.1	40.3	39.7
MGA_1398	LOCUS_13890	sequence13:894354..894803(-)	internal_stop_codon	894354..894356(-)		WP_000684092.1	phosphate acyltransferase PlsX	98.7	45.8	33.8
MGA_1399	LOCUS_13900	sequence13:894803..895531(-)	partial			WP_003245033.1	DAK2 domain-containing protein	88.4	38.7	44.2
MGA_1400	LOCUS_13910	sequence13:895961..896449(-)	internal_stop_codon	895844..895846(-),895961..895963(-)		WP_004454872.1	DAK2 domain-containing protein	94.4	28.3	44.9
MGA_1411	LOCUS_14020	sequence13:903035..903508(+)	internal_stop_codon	902990..902992(+)		WP_010965924.1	ribosome biogenesis GTP-binding protein YihA/YsxC	98.1	75.5	41.6
MGA_1414	LOCUS_14050	sequence13:904438..904593(+)	internal_stop_codon	904825..904827(+),904591..904593(+)		WP_010874884.1	inorganic diphosphatase	94.1	26.1	62.5
MGA_1415	LOCUS_14060	sequence13:904615..904827(+)	internal_stop_codon	904825..904827(+),904591..904593(+)		WP_011173971.1	inorganic diphosphatase	98.6	39.4	40.6
MGA_1418	LOCUS_14090	sequence13:905986..906564(+)	internal_stop_codon	905947..905949(+)		WP_000411056.1	Xaa-Pro dipeptidase	96.4	51.8	51.6
MGA_1419	LOCUS_14100	sequence13:906548..906877(+)	internal_stop_codon	906875..906877(+),907145..907147(+)		WP_002225339.1	prolyl aminopeptidase	88.1	31.0	50.0
MGA_1421	LOCUS_14120	sequence13:907268..907456(+)	internal_stop_codon	907454..907456(+),907145..907147(+)		WP_002680838.1	prolyl aminopeptidase	95.2	18.8	49.2
MGA_1422	LOCUS_14130	sequence13:907966..908154(+)	internal_stop_codon	908152..908154(+)		WP_010875019.1	peptide-methionine (R)-S-oxide reductase MsrB	87.1	35.8	66.7
MGA_1423	LOCUS_14140	sequence13:908200..908400(+)	internal_stop_codon	908152..908154(+)		WP_011986743.1	peptide-methionine (R)-S-oxide reductase MsrB	98.5	43.6	73.8
MGA_1431	LOCUS_14220	sequence13:913722..913961(-)	internal_stop_codon	913965..913967(-),914010..914012(-),914208..914210(-),914031..914033(-)		WP_011015910.1	leucyl aminopeptidase	100.0	17.6	37.9
MGA_1432	LOCUS_14230	sequence13:914031..914201(-)	internal_stop_codon	913965..913967(-),914010..914012(-),914208..914210(-),914031..914033(-)		WP_010874929.1	leucyl aminopeptidase	98.2	12.4	69.1
MGA_1433	LOCUS_14240	sequence13:914208..915119(-)	internal_stop_codon	914208..914210(-),913965..913967(-),915365..915367(-),914010..914012(-),914031..914033(-)		WP_011182967.1	M17 family metallopeptidase	91.1	60.0	39.9
MGA_1435	LOCUS_14260	sequence13:915656..916291(-)	internal_stop_codon	915656..915658(-),915500..915502(-),915479..915481(-),915434..915436(-)		WP_011182967.1	M17 family metallopeptidase	81.0	38.2	50.6
MGA_1437	LOCUS_14280	sequence13:916558..916944(-)	partial			WP_011249474.1	YigZ family protein	88.3	55.1	44.2
MGA_1439	LOCUS_14300	sequence13:917288..917485(-)	internal_stop_codon	917516..917518(-),917747..917749(-),917288..917290(-)		WP_001829495.1	ribosome biogenesis GTPase YlqF	86.2	19.5	41.1
MGA_1443	LOCUS_14340	sequence13:918845..919000(-)	internal_stop_codon	919004..919006(-)		WP_010883298.1	tRNA (cytidine(34)-2'-O)-methyltransferase	96.1	31.4	55.1
MGA_1444	LOCUS_14350	sequence13:919004..919312(-)	internal_stop_codon	919004..919006(-)		WP_010964019.1	tRNA (cytidine(34)-2'-O)-methyltransferase	90.2	56.9	45.7
MGA_1449	LOCUS_14400	sequence13:923434..924024(-)	internal_stop_codon	923434..923436(-)		WP_012583798.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	99.5	67.5	46.7
MGA_1452	LOCUS_14430	sequence13:925625..926068(-)	internal_stop_codon	926123..926125(-)		WP_012582670.1	recombination mediator RecR	98.0	73.0	30.6
MGA_1455	LOCUS_14460	sequence13:927573..928484(-)	partial			WP_003732084.1	DNA polymerase III subunit gamma/tau	96.4	50.9	52.2
MGA_1460	LOCUS_14510	sequence13:931177..931317(-)	internal_stop_codon	930928..930930(-),931177..931179(-)		WP_001831042.1	ribosome biogenesis GTPase Der	93.5	9.9	65.1
MGA_1461	LOCUS_14520	sequence13:931317..931523(-)	internal_stop_codon	931554..931556(-)		WP_003358949.1	(d)CMP kinase	92.6	28.1	46.0
MGA_1462	LOCUS_14530	sequence13:931554..931982(-)	internal_stop_codon	931554..931556(-)		WP_003230555.1	(d)CMP kinase	99.3	63.8	37.5
MGA_1464	LOCUS_14550	sequence13:933361..934263(+)	internal_stop_codon	934327..934329(+),934261..934263(+)		WP_010990003.1	excinuclease ABC subunit UvrA	97.3	30.4	52.1
MGA_1465	LOCUS_14560	sequence13:934405..936216(+)	internal_stop_codon	934327..934329(+),934261..934263(+)		WP_002485563.1	excinuclease ABC subunit UvrA	99.3	62.9	57.8
MGA_1467	LOCUS_14580	sequence13:936736..937221(+)	partial			WP_011167089.1	HPr(Ser) kinase/phosphatase	96.3	50.8	44.0
MGA_1471	LOCUS_14620	sequence13:938215..938367(+)	internal_stop_codon	938365..938367(+),938392..938394(+)		WP_003722610.1	thioredoxin-disulfide reductase	98.0	15.4	61.2
MGA_1472	LOCUS_14630	sequence13:938554..939141(+)	internal_stop_codon	938365..938367(+),938392..938394(+)		WP_000272320.1	thioredoxin-disulfide reductase	89.7	57.8	40.0
MGA_1477	LOCUS_14680	sequence13:942237..942509(-)	partial			WP_011202294.1	site-specific DNA-methyltransferase	91.1	14.2	55.4
MGA_1479	LOCUS_14700	sequence13:943047..943202(-)	internal_stop_codon	943047..943049(-),943203..943205(-)		WP_211204934.1	site-specific DNA-methyltransferase	100.0	9.9	68.6
MGA_1481	LOCUS_14720	sequence13:943960..944715(-)	internal_stop_codon	944770..944772(-),943960..943962(-)		WP_002894992.1	lysine--tRNA ligase	100.0	51.4	57.3
MGA_1482	LOCUS_14730	sequence13:944770..945282(-)	internal_stop_codon	944770..944772(-)		WP_000369671.1	lysine--tRNA ligase	99.4	34.5	46.6
MGA_1486	LOCUS_14770	sequence13:946396..947556(-)	internal_stop_codon	947563..947565(-),947560..947562(-),946114..946116(-),946396..946398(-)		WP_011166695.1	DNA topoisomerase IV subunit A	100.0	42.0	49.0
MGA_1487	LOCUS_14780	sequence13:947563..947859(-)	internal_stop_codon	947563..947565(-),947560..947562(-)		WP_011183207.1	DNA topoisomerase IV subunit A	93.9	10.1	70.7
MGA_1491	LOCUS_14820	sequence13:949585..950787(+)	internal_stop_codon	949513..949515(+)		WP_002864285.1	N-6 DNA methylase	44.2	13.2	33.3
MGA_1493	LOCUS_14840	sequence13:952388..952651(-)	internal_stop_codon	952685..952687(-),952388..952390(-)		WP_011183051.1	energy-coupling factor transporter transmembrane component T	100.0	26.2	66.7
MGA_1495	LOCUS_14860	sequence13:952907..953272(-)	internal_stop_codon	952685..952687(-)		WP_002379226.1	energy-coupling factor transporter transmembrane protein EcfT	70.2	31.3	38.8
MGA_1496	LOCUS_14870	sequence13:953275..953892(-)	internal_stop_codon	954070..954072(-),953956..953958(-),953923..953925(-),954100..954102(-)		WP_002288722.1	energy-coupling factor ABC transporter ATP-binding protein	97.6	69.9	52.0
MGA_1497	LOCUS_14880	sequence13:954144..954944(-)	internal_stop_codon	954070..954072(-),953956..953958(-),953923..953925(-),954100..954102(-)		WP_011183049.1	energy-coupling factor transporter ATPase	99.6	66.0	54.3
MGA_1503	LOCUS_14940	sequence13:957488..957943(-)	internal_stop_codon	958055..958057(-)		WP_011393940.1	elongation factor G	94.7	20.5	64.3
MGA_1504	LOCUS_14950	sequence13:958055..958903(-)	internal_stop_codon	959087..959089(-),958055..958057(-)		WP_011183519.1	elongation factor G	100.0	40.9	70.0
MGA_1505	LOCUS_14960	sequence13:959423..959578(-)	internal_stop_codon	959219..959221(-),959423..959425(-),959363..959365(-)		WP_011166361.1	elongation factor G	100.0	7.4	86.3
MGA_1506	LOCUS_14970	sequence13:959606..959761(-)	internal_stop_codon	959765..959767(-)		WP_001137495.1	30S ribosomal protein S7	100.0	32.7	78.4
MGA_1507	LOCUS_14980	sequence13:959765..960073(-)	internal_stop_codon	959765..959767(-)		WP_011166360.1	30S ribosomal protein S7	98.0	64.5	66.0
MGA_1521	LOCUS_15120	sequence13:968285..969301(+)	internal_stop_codon	969299..969301(+)		WP_010880145.1	serine--tRNA ligase	100.0	79.8	43.8
MGA_1522	LOCUS_15130	sequence13:969347..969553(+)	internal_stop_codon	969299..969301(+)		WP_002355965.1	serine--tRNA ligase	97.1	15.6	69.7
MGA_1523	LOCUS_15140	sequence13:969553..969927(+)	partial			WP_013097512.1	pyridoxal phosphatase	61.3	27.2	39.5
MGA_1524	LOCUS_15150	sequence13:969946..970386(+)	partial			WP_003722653.1	Cof-type HAD-IIB family hydrolase	67.1	37.5	40.4
MGA_1525	LOCUS_15160	sequence13:970976..971278(+)	partial			WP_011476106.1	Cof-type HAD-IIB family hydrolase	99.0	36.8	37.0
MGA_1526	LOCUS_15170	sequence13:971350..971667(-)	internal_stop_codon	971827..971829(-)		WP_011182916.1	ABC transporter ATP-binding protein	100.0	17.4	59.0
MGA_1527	LOCUS_15180	sequence13:971827..972270(-)	internal_stop_codon	971827..971829(-)		WP_011166241.1	ABC transporter ATP-binding protein	53.7	23.0	46.8
MGA_1538	LOCUS_15290	sequence13:980594..982090(-)	internal_stop_codon	982172..982174(-)		WP_011183568.1	ATP-dependent zinc metalloprotease FtsH	99.0	75.4	53.3
MGA_1541	LOCUS_15320	sequence13:983247..983474(-)	internal_stop_codon	983247..983249(-)		WP_011183569.1	tRNA lysidine(34) synthetase TilS	94.7	18.8	52.0
MGA_1543	LOCUS_15340	sequence13:984047..985651(-)	partial			WP_014584390.1	AAA family ATPase	93.1	62.7	31.0
MGA_1556	LOCUS_15460	sequence15:444..1109(-)	frameshift		265,455	WP_003700790.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	98.6	46.1	43.0
MGA_1561	LOCUS_15510	sequence15:3664..3876(+)	frameshift		3936,4044,3927	WP_002293877.1	UMP kinase	97.1	28.3	54.4
MGA_1562	LOCUS_15520	sequence15:4097..4486(+)	frameshift		4097	WP_000135448.1	ribosome recycling factor	97.7	69.0	44.9
MGA_1565	LOCUS_15550	sequence15:6450..6617(+)	frameshift		6642,6660,6612,6828,6351	WP_000362509.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	98.2	11.8	59.3
MGA_1577	LOCUS_15660	sequence17:353..541(+)	internal_stop_codon	230..232(+),539..541(+)		WP_002680838.1	prolyl aminopeptidase	95.2	18.8	49.2
MGA_1578	LOCUS_15670	sequence17:1047..1235(+)	internal_stop_codon	1233..1235(+)		WP_010875019.1	peptide-methionine (R)-S-oxide reductase MsrB	87.1	35.8	66.7
MGA_1579	LOCUS_15680	sequence17:1281..1481(+)	internal_stop_codon	1233..1235(+)		WP_011986743.1	peptide-methionine (R)-S-oxide reductase MsrB	98.5	43.6	73.8
MGA_1580	LOCUS_15690	sequence17:1774..2007(+)	frameshift,internal_stop_codon	2165..2167(+)	1999,1759	WP_000026653.1	Na/Pi cotransporter family protein	96.1	12.9	39.2
MGA_1586	LOCUS_15750	sequence17:3863..4063(-)	internal_stop_codon	4109..4111(-)		WP_011986743.1	peptide-methionine (R)-S-oxide reductase MsrB	98.5	43.6	73.8
MGA_1587	LOCUS_15760	sequence17:4109..4297(-)	internal_stop_codon	4109..4111(-)		WP_010875019.1	peptide-methionine (R)-S-oxide reductase MsrB	87.1	35.8	66.7
MGA_1588	LOCUS_15770	sequence17:4805..4993(-)	internal_stop_codon	5114..5116(-),4805..4807(-)		WP_002680838.1	prolyl aminopeptidase	95.2	18.8	49.2
MGA_1590	LOCUS_15780	sequence18:435..605(+)	internal_stop_codon	603..605(+)		WP_002894857.1	UMP kinase	94.6	21.6	54.7
MGA_1591	LOCUS_15790	sequence18:663..1154(+)	internal_stop_codon	603..605(+)		WP_002293877.1	UMP kinase	95.1	64.2	50.3
MGA_1596	LOCUS_15840	sequence18:5053..5544(-)	frameshift,internal_stop_codon	5601..5603(-)	5702	WP_002293877.1	UMP kinase	95.1	64.2	50.3
