{ "tc_result": [ { "organism_name": "Chitinophaga vietnamensis", "strain": "strain=BD 01", "accession": "GCA_902167635.1", "taxid": 2593957, "species_taxid": 2593957, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2079, "total_fragments": 2096, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Chitinophaga oryzae", "strain": "strain=1303", "accession": "GCA_012516375.2", "taxid": 2725414, "species_taxid": 2725414, "relation_to_type": "type", "validated": true, "ani": 79.6036, "matched_fragments": 868, "total_fragments": 2096, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga eiseniae", "strain": "strain=DSM 22224", "accession": "GCA_900167135.1", "taxid": 634771, "species_taxid": 634771, "relation_to_type": "type", "validated": true, "ani": 79.5414, "matched_fragments": 820, "total_fragments": 2096, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga solisilvae", "strain": "strain=O9", "accession": "GCA_009928525.1", "taxid": 1233460, "species_taxid": 1233460, "relation_to_type": "type", "validated": true, "ani": 79.5236, "matched_fragments": 832, "total_fragments": 2096, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga varians", "strain": "strain=KACC 19415", "accession": "GCA_014529945.1", "taxid": 2202339, "species_taxid": 2202339, "relation_to_type": "type", "validated": true, "ani": 79.5232, "matched_fragments": 822, "total_fragments": 2096, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga flava", "strain": "strain=GDMCC 1.1325", "accession": "GCA_003308995.1", "taxid": 2259036, "species_taxid": 2259036, "relation_to_type": "type", "validated": true, "ani": 79.4097, "matched_fragments": 779, "total_fragments": 2096, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga qingshengii", "strain": "strain=JCM 30026", "accession": "GCA_014529935.1", "taxid": 1569794, "species_taxid": 1569794, "relation_to_type": "type", "validated": true, "ani": 79.4071, "matched_fragments": 821, "total_fragments": 2096, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga fulva", "strain": "strain=G-6-1-13", "accession": "GCA_012927205.1", "taxid": 2728842, "species_taxid": 2728842, "relation_to_type": "type", "validated": true, "ani": 79.4069, "matched_fragments": 823, "total_fragments": 2096, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga arvensicola", "strain": "strain=DSM 3695", "accession": "GCA_900110835.1", "taxid": 29529, "species_taxid": 29529, "relation_to_type": "type", "validated": true, "ani": 79.3108, "matched_fragments": 741, "total_fragments": 2096, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga dinghuensis", "strain": "strain=DSM 29821", "accession": "GCA_003259435.1", "taxid": 1539050, "species_taxid": 1539050, "relation_to_type": "type", "validated": true, "ani": 79.2995, "matched_fragments": 649, "total_fragments": 2096, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga niastensis", "strain": "strain=DSM 24859", "accession": "GCA_003014755.1", "taxid": 536980, "species_taxid": 536980, "relation_to_type": "type", "validated": true, "ani": 79.2058, "matched_fragments": 773, "total_fragments": 2096, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga hostae", "strain": "strain=2R12", "accession": "GCA_018224885.1", "taxid": 2831022, "species_taxid": 2831022, "relation_to_type": "type", "validated": true, "ani": 79.087, "matched_fragments": 746, "total_fragments": 2096, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga rhizophila", "strain": "strain=B61", "accession": "GCA_019492185.1", "taxid": 2866212, "species_taxid": 2866212, "relation_to_type": "type", "validated": true, "ani": 77.5953, "matched_fragments": 253, "total_fragments": 2096, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_902167635.1", "gtdb_species": "s__Chitinophaga vietnamensis", "ani": 100.0, "matched_fragments": 2081, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_012516355.1", "gtdb_species": "s__Chitinophaga sp012516355", "ani": 79.6326, "matched_fragments": 856, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.48", "min_intra_species_ani": "99.48", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003994345.2", "gtdb_species": "s__Chitinophaga extrema", "ani": 79.5651, "matched_fragments": 824, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.60", "min_intra_species_ani": "98.60", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_001870995.2", "gtdb_species": "s__Chitinophaga sp001870995", "ani": 79.5389, "matched_fragments": 744, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900167135.1", "gtdb_species": "s__Chitinophaga eiseniae", "ani": 79.5379, "matched_fragments": 820, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014529945.1", "gtdb_species": "s__Chitinophaga varians", "ani": 79.5138, "matched_fragments": 823, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018255755.1", "gtdb_species": "s__Chitinophaga sp018255755", "ani": 79.476, "matched_fragments": 796, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_012641275.1", "gtdb_species": "s__Chitinophaga varians_A", "ani": 79.4387, "matched_fragments": 829, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003308995.1", "gtdb_species": "s__Chitinophaga flava", "ani": 79.4098, "matched_fragments": 779, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_012927205.1", "gtdb_species": "s__Chitinophaga fulva", "ani": 79.4034, "matched_fragments": 822, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900110835.1", "gtdb_species": "s__Chitinophaga arvensicola", "ani": 79.32, "matched_fragments": 739, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003259435.1", "gtdb_species": "s__Chitinophaga dinghuensis", "ani": 79.3062, "matched_fragments": 647, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019236475.1", "gtdb_species": "s__Chitinophaga sp019236475", "ani": 79.2191, "matched_fragments": 617, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003014755.1", "gtdb_species": "s__Chitinophaga niastensis", "ani": 79.2058, "matched_fragments": 773, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_012641265.1", "gtdb_species": "s__Chitinophaga eiseniae_A", "ani": 79.1572, "matched_fragments": 763, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007829335.1", "gtdb_species": "s__Chitinophaga polysaccharea_B", "ani": 79.113, "matched_fragments": 746, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_012726295.1", "gtdb_species": "s__Chitinophaga sp012726295", "ani": 79.0612, "matched_fragments": 731, "total_fragments": 2096, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.43", "min_intra_species_ani": "99.43", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" } ] }