{ "type": "genome", "identifier": "GCF_902459585.1", "organism": "Pandoraea nosoerga", "title": "Pandoraea nosoerga", "description": "na", "data type": "Genome sequencing and assembly", "organization": "LM-UGent", "publication": [ {} ], "properties": { "assembly_accession": "GCF_902459585.1", "bioproject": "PRJNA224116", "biosample": "SAMEA5537684", "wgs_master": "CABPSC000000000.1", "refseq_category": "reference genome", "taxid": "2508296", "species_taxid": "2508296", "organism_name": "Pandoraea nosoerga", "infraspecific_name": "strain=LMG 31109", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/09/11", "asm_name": "LMG 31109", "asm_submitter": "LM-UGent", "gbrs_paired_asm": "GCA_902459585.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/902/459/585/GCF_902459585.1_LMG_31109", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4862114", "genome_size_ungapped": "4862114", "gc_percent": "66.000000", "replicon_count": "0", "scaffold_count": "41", "contig_count": "41", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_902459585.1-RS_2024_08_20", "annotation_date": "2024-08-20", "total_gene_count": "4363", "protein_coding_gene_count": "4239", "non_coding_gene_count": "65", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-09-11", "dateModified": "2019-09-11", "datePublished": "2019-09-11", "_annotation": { "sample_count": 1, "sample_organism": [ "Pandoraea nosoerga" ], "sample_taxid": [ "2508296" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA" ], "sample_host_location_id": [], "data_size": "1.337 MB", 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pandoraea pneumonica", "strain": "strain=LMG 31114", "accession": "GCA_902459645.1", "taxid": 2508299, "species_taxid": 2508299, "relation_to_type": "type", "validated": true, "ani": 83.9859, "matched_fragments": 1216, "total_fragments": 1602, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia perseverans", "strain": "strain=INN12", "accession": "GCA_022870505.1", "taxid": 2615214, "species_taxid": 2615214, "relation_to_type": "type", "validated": true, "ani": 78.8948, "matched_fragments": 648, "total_fragments": 1602, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia podalyriae", "strain": "strain=WC7.3b", "accession": "GCA_014397785.1", "taxid": 1938811, "species_taxid": 1938811, "relation_to_type": "type", "validated": true, "ani": 78.6898, "matched_fragments": 556, "total_fragments": 1602, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia gardini", "strain": "strain=LMG 32171", "accession": "GCA_907164575.1", "taxid": 2823469, "species_taxid": 2823469, "relation_to_type": "type", "validated": true, "ani": 78.5732, "matched_fragments": 474, "total_fragments": 1602, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia azotifigens", "strain": "strain=NF 2-5-3", "accession": "GCA_007995085.1", "taxid": 2057004, "species_taxid": 2057004, "relation_to_type": "type", "validated": true, "ani": 78.4999, "matched_fragments": 560, "total_fragments": 1602, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia saeva", "strain": "strain=LMG 31841", "accession": "GCA_907164555.1", "taxid": 2777537, "species_taxid": 2777537, "relation_to_type": "type", "validated": true, "ani": 78.4195, "matched_fragments": 474, "total_fragments": 1602, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, 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