{
    "type": "genome",
    "identifier": "GCF_902830275.1",
    "organism": "Burkholderia stagnalis",
    "title": "Burkholderia stagnalis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "CARDIFF SCHOOL OF BIOSCIENCES",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_902830275.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA6503566",
        "wgs_master": "CADESW000000000.1",
        "refseq_category": "na",
        "taxid": "1503054",
        "species_taxid": "1503054",
        "organism_name": "Burkholderia stagnalis",
        "infraspecific_name": "strain=LMG 28156",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/06/09",
        "asm_name": "ASM90283027v1",
        "asm_submitter": "CARDIFF SCHOOL OF BIOSCIENCES",
        "gbrs_paired_asm": "GCA_902830275.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/902/830/275/GCF_902830275.1_ASM90283027v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "8032380",
        "genome_size_ungapped": "8032380",
        "gc_percent": "67.000000",
        "replicon_count": "0",
        "scaffold_count": "149",
        "contig_count": "149",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_902830275.1-RS_2024_04_20",
        "annotation_date": "2024-04-20",
        "total_gene_count": "7357",
        "protein_coding_gene_count": "7103",
        "non_coding_gene_count": "75",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-06-09",
    "dateModified": "2020-06-09",
    "datePublished": "2020-06-09",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Burkholderia stagnalis"
        ],
        "sample_taxid": [
            "1503054"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia"
        ],
        "sample_host_location_id": [],
        "data_size": "2.163 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "8029782",
        "Number of Sequences": "132",
        "Longest Sequences (bp)": "866035",
        "N50 (bp)": "262379",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "67.2",
        "Number of CDSs": "7132",
        "Average Protein Length": "325.3",
        "Coding Ratio (%)": "86.7",
        "Number of rRNAs": "6",
        "Number of tRNAs": "71",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Burkholderia stagnalis",
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                "relation_to_type": "type",
                "validated": true,
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            },
            {
                "organism_name": "Burkholderia stagnalis",
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            },
            {
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                "accession": "GCA_902499155.1",
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            },
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                "species_taxid": 101571,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Burkholderia ubonensis",
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                "accession": "GCA_902833085.1",
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Burkholderia ubonensis",
                "strain": "",
                "accession": "GCA_902499185.1",
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                "species_taxid": 101571,
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                "ani": 91.2999,
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                "status": "below_threshold"
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                "ani_threshold": 95,
                "status": "below_threshold"
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                "organism_name": "Burkholderia anthina",
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            {
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                "species_taxid": 488447,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Burkholderia contaminans",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Burkholderia perseverans",
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                "accession": "GCA_022870505.1",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Paraburkholderia podalyriae",
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                "accession": "GCA_014397785.1",
                "taxid": 1938811,
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                "relation_to_type": "type",
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                "matched_fragments": 1143,
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                "ani_threshold": 95,
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            }
        ],
        "cc_result": {
            "completeness": 100.0,
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}