{
    "type": "genome",
    "identifier": "GCF_902859605.1",
    "organism": "Achromobacter spanius",
    "title": "Achromobacter spanius",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "GHENT UNIVERSITY",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_902859605.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA6647250",
        "wgs_master": "CADIJT000000000.1",
        "refseq_category": "na",
        "taxid": "217203",
        "species_taxid": "217203",
        "organism_name": "Achromobacter spanius",
        "infraspecific_name": "strain=LMG 5911",
        "isolate": "LMG 5911",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/05/07",
        "asm_name": "LMG 5911",
        "asm_submitter": "GHENT UNIVERSITY",
        "gbrs_paired_asm": "GCA_902859605.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/902/859/605/GCF_902859605.1_LMG_5911",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "6360923",
        "genome_size_ungapped": "6360923",
        "gc_percent": "64.500000",
        "replicon_count": "0",
        "scaffold_count": "61",
        "contig_count": "61",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_902859605.1-RS_2024_07_23",
        "annotation_date": "2024-07-23",
        "total_gene_count": "5820",
        "protein_coding_gene_count": "5697",
        "non_coding_gene_count": "66",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-05-07",
    "dateModified": "2020-05-07",
    "datePublished": "2020-05-07",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Achromobacter spanius"
        ],
        "sample_taxid": [
            "217203"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "1.759 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "6360923",
        "Number of Sequences": "61",
        "Longest Sequences (bp)": "1182261",
        "N50 (bp)": "280218",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "64.3",
        "Number of CDSs": "5757",
        "Average Protein Length": "330.6",
        "Coding Ratio (%)": "89.8",
        "Number of rRNAs": "2",
        "Number of tRNAs": "58",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Achromobacter spanius",
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                "accession": "GCA_902859605.1",
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                "relation_to_type": "suspected-type",
                "validated": true,
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                "matched_fragments": 2085,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Achromobacter spanius",
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                "validated": true,
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                "total_fragments": 2090,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Achromobacter piechaudii",
                "strain": "strain=LMG 1873",
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                "species_taxid": 72556,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Achromobacter piechaudii",
                "strain": "strain=NBRC 102461",
                "accession": "GCA_001571245.1",
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                "ani": 88.3418,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Achromobacter kerstersii",
                "strain": "strain=LMG 3441",
                "accession": "GCA_902859595.1",
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                "species_taxid": 1353890,
                "relation_to_type": "type",
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                "ani": 87.5525,
                "matched_fragments": 1656,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Achromobacter marplatensis",
                "strain": "strain=CECT 7342",
                "accession": "GCA_003315095.1",
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                "species_taxid": 470868,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Achromobacter marplatensis",
                "strain": "strain=B2",
                "accession": "GCA_002209535.1",
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                "relation_to_type": "type",
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                "matched_fragments": 1581,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Achromobacter pestifer",
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                "species_taxid": 1353889,
                "relation_to_type": "type",
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                "matched_fragments": 1562,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Achromobacter xylosoxidans",
                "strain": "strain=PartM-Axylosoxidans-RM8376",
                "accession": "GCA_022870085.1",
                "taxid": 85698,
                "species_taxid": 85698,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.0072,
                "matched_fragments": 1449,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Achromobacter insolitus",
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                "matched_fragments": 1359,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bordetella bronchiseptica",
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                "species_taxid": 518,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Eoetvoesia caeni",
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                "accession": "GCA_022688825.1",
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                "species_taxid": 645616,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.428,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cupriavidus numazuensis",
                "strain": "strain=LMG 26411",
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    },
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}