{ "type": "genome", "identifier": "GCF_902859895.1", "organism": "Pararobbsia alpina", "title": "Pararobbsia alpina", "description": "na", "data type": "Genome sequencing and assembly", "organization": "GHENT UNIVERSITY", "publication": [ {} ], "properties": { "assembly_accession": "GCF_902859895.1", "bioproject": "PRJNA224116", "biosample": "SAMEA6678268", "wgs_master": "CADIKM000000000.1", "refseq_category": "reference genome", "taxid": "621374", "species_taxid": "621374", "organism_name": "Pararobbsia alpina", "infraspecific_name": "strain=LMG 28138", "isolate": "LMG 28138", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/05/07", "asm_name": "LMG 28138", "asm_submitter": "GHENT UNIVERSITY", "gbrs_paired_asm": "GCA_902859895.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/902/859/895/GCF_902859895.1_LMG_28138", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6703622", "genome_size_ungapped": "6703622", "gc_percent": "61.500000", "replicon_count": "0", "scaffold_count": "249", "contig_count": "249", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_902859895.1-RS_2024_05_05", "annotation_date": "2024-05-05", "total_gene_count": "6195", "protein_coding_gene_count": "5806", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-05-07", "dateModified": "2020-05-07", "datePublished": "2020-05-07", "_annotation": { "sample_count": 1, "sample_organism": [ "Pararobbsia alpina" ], "sample_taxid": [ "621374" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Mexico" ], 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"Burkholderia ubonensis", "strain": "", "accession": "GCA_902499185.1", "taxid": 101571, "species_taxid": 101571, "relation_to_type": "type", "validated": true, "ani": 79.3344, "matched_fragments": 591, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia ubonensis", "strain": "strain=LMG 20358", "accession": "GCA_902833085.1", "taxid": 101571, "species_taxid": 101571, "relation_to_type": "type", "validated": true, "ani": 79.3316, "matched_fragments": 610, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia metallica", "strain": "", "accession": "GCA_902499065.1", "taxid": 488729, "species_taxid": 488729, "relation_to_type": "type", "validated": true, "ani": 79.2957, "matched_fragments": 573, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia stagnalis", "strain": "", "accession": "GCA_902499155.1", "taxid": 1503054, "species_taxid": 1503054, "relation_to_type": "type", "validated": true, "ani": 79.1964, "matched_fragments": 587, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia metallica", "strain": "strain=LMG 24068", "accession": "GCA_902832845.1", "taxid": 488729, "species_taxid": 488729, "relation_to_type": "type", "validated": true, "ani": 79.194, "matched_fragments": 602, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia stagnalis", "strain": "strain=LMG 28156", "accession": "GCA_902830275.1", "taxid": 1503054, "species_taxid": 1503054, "relation_to_type": "type", "validated": true, "ani": 79.1486, "matched_fragments": 614, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia anthina", "strain": "strain=DSM 16086", "accession": "GCA_016836725.1", "taxid": 179879, "species_taxid": 179879, "relation_to_type": 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79.0269, "matched_fragments": 602, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia oklahomensis", "strain": "strain=C6786", "accession": "GCA_000959365.1", "taxid": 342113, "species_taxid": 342113, "relation_to_type": "type", "validated": true, "ani": 79.0175, "matched_fragments": 579, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia oklahomensis", "strain": "strain=C6786", "accession": "GCA_001522135.2", "taxid": 342113, "species_taxid": 342113, "relation_to_type": "type", "validated": true, "ani": 79.0097, "matched_fragments": 581, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia caballeronis", "strain": "strain=TNe-841", "accession": "GCA_900104845.1", "taxid": 416943, "species_taxid": 416943, "relation_to_type": "type", "validated": true, "ani": 79.009, "matched_fragments": 654, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia thailandensis", "strain": "strain=E264", "accession": "GCA_003568605.1", "taxid": 57975, "species_taxid": 57975, "relation_to_type": "type", "validated": true, "ani": 78.9913, "matched_fragments": 577, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia thailandensis", "strain": "strain=E264; ATCC 700388", "accession": "GCA_000012365.1", "taxid": 57975, "species_taxid": 57975, "relation_to_type": "type", "validated": true, "ani": 78.9833, "matched_fragments": 580, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia oklahomensis", "strain": "strain=C6786", "accession": "GCA_000170375.1", "taxid": 342113, "species_taxid": 342113, "relation_to_type": "type", "validated": true, "ani": 78.9573, "matched_fragments": 539, "total_fragments": 2132, "ani_threshold": 95, "status": 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23650", "accession": "GCA_900113825.1", "taxid": 420953, "species_taxid": 420953, "relation_to_type": "type", "validated": true, "ani": 78.6511, "matched_fragments": 556, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caballeronia ptereochthonis", "strain": "", "accession": "GCA_001545075.2", "taxid": 1777144, "species_taxid": 1777144, "relation_to_type": "type", "validated": true, "ani": 78.6383, "matched_fragments": 600, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia acidicola", "strain": "strain=ATCC 31363", "accession": "GCA_002362315.1", "taxid": 1912599, "species_taxid": 1912599, "relation_to_type": "type", "validated": true, "ani": 78.6351, "matched_fragments": 542, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia gladioli", "strain": "strain=ATCC 10248", "accession": "GCA_000959725.1", "taxid": 28095, 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