{ "type": "genome", "identifier": "GCF_903994045.1", "organism": "Jeotgalicoccus meleagridis", "title": "Jeotgalicoccus meleagridis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "INSTITUT PASTEUR", "publication": [ {} ], "properties": { "assembly_accession": "GCF_903994045.1", "bioproject": "PRJNA224116", "biosample": "SAMEA7109250", "wgs_master": "CAJEWD000000000.1", "refseq_category": "reference genome", "taxid": "2759181", "species_taxid": "2759181", "organism_name": "Jeotgalicoccus meleagridis", "infraspecific_name": "strain=CIP 111649", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/12", "asm_name": "CIP111649", "asm_submitter": "INSTITUT PASTEUR", "gbrs_paired_asm": "GCA_903994045.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/903/994/045/GCF_903994045.1_CIP111649", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2070175", "genome_size_ungapped": "2069881", "gc_percent": "36.000000", "replicon_count": "0", "scaffold_count": "14", "contig_count": "14", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_903994045.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "2161", "protein_coding_gene_count": "2072", "non_coding_gene_count": "67", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-08-12", "dateModified": "2020-08-12", "datePublished": "2020-08-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Jeotgalicoccus meleagridis" ], "sample_taxid": [ "2759181" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], 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"mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.039, "cell_length": -0.027, "doubling_h": null, "growth_tmp": 29.1, "optimum_tmp": 32.5, "optimum_ph": 7.625, "genome_size": 2231323.0, "gc_content": 40.2, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": 1.0, "sporulation": 0.0, "motility": 0.0, "range_salinity": 1.0, "facultative_respiration": 0.375, "anaerobic_respiration": 0.0, "aerobic_respiration": 0.625, "mesophilic_range_tmp": 0.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 1.0, "bacillus_cell_shape": 0.0, "coccus_cell_shape": 1.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Jeotgalicoccus", "meleagridis" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }