{ "type": "genome", "identifier": "GCF_904061905.1", "organism": "Pseudomonas carbonaria", "title": "Pseudomonas carbonaria", "description": "na", "data type": "Genome sequencing and assembly", "organization": "INSTITUT PASTEUR", "publication": [ {} ], "properties": { "assembly_accession": "GCF_904061905.1", "bioproject": "PRJNA224116", "biosample": "SAMEA7198703", "wgs_master": "CAJFCI000000000.1", "refseq_category": "reference genome", "taxid": "2762745", "species_taxid": "2762745", "organism_name": "Pseudomonas carbonaria", "infraspecific_name": "strain=CIP 111764", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/09/02", "asm_name": "CIP111764", "asm_submitter": "INSTITUT PASTEUR", "gbrs_paired_asm": "GCA_904061905.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/904/061/905/GCF_904061905.1_CIP111764", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5546086", "genome_size_ungapped": "5544594", "gc_percent": "66.000000", "replicon_count": "0", "scaffold_count": "143", "contig_count": "143", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_904061905.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "5047", "protein_coding_gene_count": "4890", "non_coding_gene_count": "67", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-09-02", "dateModified": "2020-09-02", "datePublished": "2020-09-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas carbonaria" ], "sample_taxid": [ "2762745" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], 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"status": "conclusive" }, { "organism_name": "Pseudomonas thermotolerans", "strain": "strain=DSM 14292", "accession": "GCA_000364625.1", "taxid": 157784, "species_taxid": 157784, "relation_to_type": "type", "validated": true, "ani": 87.2323, "matched_fragments": 1037, "total_fragments": 1797, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas insulae", "strain": "strain=UL073", "accession": "GCA_016901015.1", "taxid": 2809017, "species_taxid": 2809017, "relation_to_type": "type", "validated": true, "ani": 86.5198, "matched_fragments": 1136, "total_fragments": 1797, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cavernae", "strain": "strain=K2W31S-8", "accession": "GCA_003595175.1", "taxid": 2320867, "species_taxid": 2320867, "relation_to_type": "type", "validated": true, "ani": 85.9318, "matched_fragments": 1104, "total_fragments": 1797, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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