{
    "type": "genome",
    "identifier": "GCF_904424705.1",
    "organism": "Rossellomorea arthrocnemi",
    "title": "Rossellomorea arthrocnemi",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Universidad de Sevilla",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_904424705.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA7306390",
        "wgs_master": "CAJGBF000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2769542",
        "species_taxid": "2769542",
        "organism_name": "Rossellomorea arthrocnemi",
        "infraspecific_name": "strain=EAR8",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/11/21",
        "asm_name": "Genoma_EAR8",
        "asm_submitter": "Universidad de Sevilla",
        "gbrs_paired_asm": "GCA_904424705.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/904/424/705/GCF_904424705.1_Genoma_EAR8",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4775586",
        "genome_size_ungapped": "4775586",
        "gc_percent": "42.000000",
        "replicon_count": "0",
        "scaffold_count": "107",
        "contig_count": "107",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_904424705.1-RS_2024_12_11",
        "annotation_date": "2024-12-11",
        "total_gene_count": "4869",
        "protein_coding_gene_count": "4671",
        "non_coding_gene_count": "154",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-11-21",
    "dateModified": "2020-11-21",
    "datePublished": "2020-11-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Rossellomorea arthrocnemi"
        ],
        "sample_taxid": [
            "2769542"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Spain"
        ],
        "sample_host_location_id": [],
        "data_size": "1.360 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4772161",
        "Number of Sequences": "84",
        "Longest Sequences (bp)": "562732",
        "N50 (bp)": "199119",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "42.0",
        "Number of CDSs": "4749",
        "Average Protein Length": "280.3",
        "Coding Ratio (%)": "83.7",
        "Number of rRNAs": "7",
        "Number of tRNAs": "107",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Rossellomorea arthrocnemi",
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                "accession": "GCA_904424705.1",
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1554,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Rossellomorea vietnamensis",
                "strain": "strain=NBRC 101237",
                "accession": "GCA_001591825.1",
                "taxid": 218284,
                "species_taxid": 218284,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 84.8876,
                "matched_fragments": 1061,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rossellomorea aquimaris",
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                "accession": "GCA_001648555.1",
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                "species_taxid": 189382,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus enclensis",
                "strain": "strain=SGD-1123",
                "accession": "GCA_900094975.1",
                "taxid": 1402860,
                "species_taxid": 1402860,
                "relation_to_type": "type",
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                "total_fragments": 1559,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus enclensis",
                "strain": "strain=SGD-1123",
                "accession": "GCA_001456935.1",
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                "species_taxid": 1402860,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1358,
                "matched_fragments": 469,
                "total_fragments": 1559,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rossellomorea marisflavi",
                "strain": "strain=JCM 11544",
                "accession": "GCA_001274775.1",
                "taxid": 189381,
                "species_taxid": 189381,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 78.3953,
                "matched_fragments": 287,
                "total_fragments": 1559,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sutcliffiella halmapala",
                "strain": "strain=DSM 8723",
                "accession": "GCA_002019665.1",
                "taxid": 79882,
                "species_taxid": 79882,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2571,
                "matched_fragments": 78,
                "total_fragments": 1559,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCF_904424705.1",
                "gtdb_species": "s__Rossellomorea sp904424705",
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                "matched_fragments": 1554,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_002563655.1",
                "gtdb_species": "s__Rossellomorea sp002563655",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
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            {
                "accession": "GCF_001305855.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
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                "mean_intra_species_ani": "N/A",
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                "accession": "GCF_003315075.1",
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            },
            {
                "accession": "GCF_000935355.1",
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        ]
    },
    "_bac2feature": {
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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    },
    "_genome_taxon": [
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        "arthrocnemi"
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}