{ "type": "genome", "identifier": "GCF_910593785.1", "organism": "Leucobacter soli", "title": "Leucobacter soli", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Institut Pasteur", "publication": [ {} ], "properties": { "assembly_accession": "GCF_910593785.1", "bioproject": "PRJNA224116", "biosample": "SAMEA8924568", "wgs_master": "CAJVAP000000000.1", "refseq_category": "reference genome", "taxid": "2812850", "species_taxid": "2812850", "organism_name": "Leucobacter soli", "infraspecific_name": "strain=CIP 111803", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/07/07", "asm_name": "IMT-300", "asm_submitter": "Institut Pasteur", "gbrs_paired_asm": "GCA_910593785.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/910/593/785/GCF_910593785.1_IMT-300", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2865069", "genome_size_ungapped": "2865029", "gc_percent": "69.500000", "replicon_count": "0", "scaffold_count": "67", "contig_count": "67", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_910593785.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "2598", "protein_coding_gene_count": "2517", "non_coding_gene_count": "55", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-07-07", "dateModified": "2021-07-07", "datePublished": "2021-07-07", "_annotation": { "sample_count": 1, "sample_organism": [ "Leucobacter soli" ], "sample_taxid": [ "2812850" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "0.774 MB", 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chironomi", "strain": "strain=DSM 19883", "accession": "GCA_000421845.1", "taxid": 491918, "species_taxid": 491918, "relation_to_type": "type", "validated": true, "ani": 81.4529, "matched_fragments": 451, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter ruminantium", "strain": "strain=A2", "accession": "GCA_017565705.1", "taxid": 1289170, "species_taxid": 1289170, "relation_to_type": "type", "validated": true, "ani": 81.0478, "matched_fragments": 431, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter muris", "strain": "strain=DSM 101948", "accession": "GCA_004028235.1", "taxid": 1935379, "species_taxid": 1935379, "relation_to_type": "type", "validated": true, "ani": 81.0136, "matched_fragments": 459, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter celer subsp. astrifaciens", "strain": "strain=CBX151", "accession": "GCA_001273835.1", "taxid": 1461260, "species_taxid": 668625, "relation_to_type": "type", "validated": true, "ani": 81.011, "matched_fragments": 503, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter weissii", "strain": "strain=S27", "accession": "GCA_017565745.1", "taxid": 1983706, "species_taxid": 1983706, "relation_to_type": "type", "validated": true, "ani": 80.9426, "matched_fragments": 462, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter chromiisoli", "strain": "strain=CSA1", "accession": "GCA_016522505.1", "taxid": 2796471, "species_taxid": 2796471, "relation_to_type": "type", "validated": true, "ani": 80.8657, "matched_fragments": 475, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter massiliensis", "strain": "strain=122RC15", "accession": "GCA_002982315.1", "taxid": 1686285, "species_taxid": 1686285, "relation_to_type": "type", "validated": true, "ani": 80.6244, "matched_fragments": 421, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter chromiiresistens", "strain": "strain=JG 31", "accession": "GCA_000231305.1", "taxid": 1079994, "species_taxid": 1079994, "relation_to_type": "type", "validated": true, "ani": 80.6221, "matched_fragments": 451, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter zeae", "strain": "strain=CC-MF41", "accession": "GCA_016758175.1", "taxid": 1257004, "species_taxid": 1257004, "relation_to_type": "type", "validated": true, "ani": 80.6103, "matched_fragments": 456, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter chromiiresistens", "strain": "strain=DSM 22788", "accession": "GCA_900102345.1", "taxid": 1079994, "species_taxid": 1079994, "relation_to_type": "type", "validated": true, "ani": 80.5651, "matched_fragments": 460, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter tardus", "strain": "strain=K 70/01", "accession": "GCA_017583045.1", "taxid": 501483, "species_taxid": 501483, "relation_to_type": "type", "validated": true, "ani": 79.3484, "matched_fragments": 350, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces mariniharenae", "strain": "strain=NEAU-184", "accession": "GCA_008122505.1", "taxid": 2604423, "species_taxid": 2604423, "relation_to_type": "type", "validated": true, "ani": 78.3968, "matched_fragments": 324, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium gallinarum", "strain": "strain=Sa1CUA4", "accession": "GCA_014837165.1", "taxid": 2762209, "species_taxid": 2762209, "relation_to_type": "type", "validated": true, "ani": 78.0679, "matched_fragments": 265, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter phaseoli", "strain": "strain=LPPA 982", "accession": "GCA_021922925.1", "taxid": 1734031, "species_taxid": 1734031, "relation_to_type": "type", "validated": true, "ani": 77.9537, "matched_fragments": 272, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium atlanticum", "strain": "strain=WY121", "accession": "GCA_015277815.1", "taxid": 2782168, "species_taxid": 2782168, "relation_to_type": "type", "validated": true, "ani": 77.9089, "matched_fragments": 249, "total_fragments": 920, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_910593785.1", "gtdb_species": "s__Leucobacter sp910593785", "ani": 100.0, "matched_fragments": 916, "total_fragments": 920, "gtdb_taxonomy": 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