# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_67	LOCUS_00670	sequence01:55645..56247(-)	partial			WP_000760278.1	SH3 domain-containing protein	73.5	23.2	28.4
MGA_86	LOCUS_00860	sequence01:75047..75883(-)	internal_stop_codon	76073..76075(-)		WP_000542320.1	Fic family protein	97.8	67.0	39.1
MGA_98	LOCUS_00980	sequence01:86084..91060(-)	partial			WP_011105498.1	RHS repeat-associated core domain-containing protein	50.8	57.3	22.8
MGA_106	LOCUS_01060	sequence01:98628..102056(-)	partial			WP_010989329.1	type VII secretion protein EsaA	41.0	44.4	54.2
MGA_110	LOCUS_01100	sequence01:104468..105346(+)	partial			WP_048065411.1	class I SAM-dependent methyltransferase	63.0	63.4	25.0
MGA_142	LOCUS_01420	sequence01:138591..140162(-)	partial			WP_010989574.1	lmo0801 family class 1 internalin	82.0	73.5	28.7
MGA_155	LOCUS_01550	sequence01:148231..151194(+)	partial			WP_000791146.1	M4 family metallopeptidase	33.8	40.8	32.3
MGA_207	LOCUS_02070	sequence01:211654..214542(+)	partial			WP_010989427.1	class 1 internalin InlI	23.9	12.1	28.1
MGA_272	LOCUS_02720	sequence01:282894..283382(-)	partial			WP_003695998.1	DUF4065 domain-containing protein	80.2	67.6	33.3
MGA_341	LOCUS_03400	sequence01:350864..351367(-)	frameshift,internal_stop_codon	350862..350864(-),351637..351639(-)	351579,351356,351525	WP_010708067.1	site-specific integrase	98.8	45.6	52.3
MGA_342	LOCUS_03410	sequence01:351637..351900(-)	frameshift,internal_stop_codon	351637..351639(-)	351579,351525,351359	WP_010708067.1	site-specific integrase	94.3	21.1	36.6
MGA_372	LOCUS_03700	sequence02:28894..29331(+)	frameshift		29328	WP_003721945.1	DUF1189 domain-containing protein	100.0	54.9	67.1
MGA_373	LOCUS_03710	sequence02:29408..29686(+)	frameshift		29328	WP_003721945.1	DUF1189 domain-containing protein	93.5	32.3	66.3
MGA_376	LOCUS_03740	sequence02:32073..32693(-)	partial			WP_002289236.1	pentapeptide repeat-containing protein	74.3	72.9	30.1
MGA_463	LOCUS_04610	sequence02:122186..122560(-)	partial			WP_003723530.1	lipopolysaccharide assembly protein LapA domain-containing protein	73.4	79.8	58.2
MGA_504	LOCUS_05020	sequence02:168442..168828(-)	frameshift		168845	WP_010990107.1	M20/M25/M40 family metallo-hydrolase	92.2	32.3	39.0
MGA_539	LOCUS_05370	sequence02:200909..201370(+)	partial			WP_009931731.1	competence type IV pilus minor pilin ComGF	74.5	72.9	42.1
MGA_547	LOCUS_05450	sequence02:206578..206949(+)	frameshift,internal_stop_codon	206552..206554(+),206567..206569(+)	206572	WP_003722463.1	hypothetical protein	100.0	76.1	48.0
MGA_616	LOCUS_06130	sequence03:12863..13429(-)	partial			WP_003724010.1	hypothetical protein	95.2	32.6	41.1
MGA_645	LOCUS_06420	sequence03:43974..45110(-)	partial			WP_002900606.1	ABC transporter permease	46.0	71.3	26.7
MGA_669	LOCUS_06660	sequence03:73831..74037(-)	partial			WP_082089387.1	copper ion binding protein	69.1	69.1	53.2
MGA_858	LOCUS_08550	sequence03:255635..255967(-)	internal_stop_codon	255986..255988(-)		WP_003246657.1	DUF1775 domain-containing protein	87.3	47.1	45.9
MGA_859	LOCUS_08560	sequence03:255986..256246(-)	internal_stop_codon	255986..255988(-)		WP_003731961.1	DUF1775 domain-containing protein	91.9	38.5	48.1
MGA_862	LOCUS_08590	sequence03:258103..260523(-)	partial			WP_000791146.1	M4 family metallopeptidase	29.3	27.6	41.9
MGA_863	LOCUS_08600	sequence04:382..1929(-)	partial			WP_176994209.1	glycoside hydrolase family 43 protein	72.6	68.4	37.9
MGA_996	LOCUS_09920	sequence04:137111..137725(+)	partial			WP_013229926.1	lytic murein transglycosylase	74.0	42.1	29.2
MGA_1110	LOCUS_11060	sequence05:7688..8122(+)	frameshift		7637	WP_002681712.1	hypothetical protein	95.8	75.0	43.5
MGA_1185	LOCUS_11810	sequence05:86518..86931(+)	partial			WP_004194119.1	ComF family protein	97.8	59.7	47.0
MGA_1246	LOCUS_12420	sequence05:152794..153648(+)	partial			WP_011673999.1	phosphatase PAP2 family protein	57.4	50.0	29.4
MGA_1264	LOCUS_12600	sequence05:169906..172197(-)	partial			WP_000576912.1	membrane protein	23.1	61.1	31.0
MGA_1295	LOCUS_12910	sequence05:192344..193054(+)	partial			WP_010922070.1	N-6 DNA methylase	63.1	73.0	47.1
MGA_1297	LOCUS_12930	sequence05:195771..196133(+)	partial			WP_010714182.1	VRR-NUC domain-containing protein	70.8	79.2	51.8
MGA_1314	LOCUS_13100	sequence05:207383..212224(+)	partial			WP_013389880.1	phage tail tape measure protein	52.4	75.5	24.7
MGA_1319	LOCUS_13150	sequence05:215080..215442(+)	partial			WP_009931691.1	hypothetical protein	89.2	64.8	53.3
MGA_1325	LOCUS_13210	sequence05:217495..218469(+)	partial			WP_011392786.1	N-acetylmuramoyl-L-alanine amidase	59.3	76.9	32.3
MGA_1332	LOCUS_13280	sequence05:222003..222272(+)	partial			WP_209021411.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	77.5	9.7	39.4
MGA_1341	LOCUS_13370	sequence05:231217..232416(-)	partial			WP_011476203.1	tyrosine-type recombinase/integrase	76.4	74.8	27.5
MGA_1351	LOCUS_13470	sequence05:235787..236728(+)	partial			WP_010714058.1	DUF4373 domain-containing protein	56.9	61.8	48.3
MGA_1357	LOCUS_13530	sequence05:238453..238623(+)	partial			WP_011861019.1	DNA adenine methylase	94.6	19.8	47.2
MGA_1375	LOCUS_13710	sequence05:249245..252793(+)	partial			WP_002286502.1	phage tail tape measure protein	49.6	45.8	29.3
MGA_1377	LOCUS_13730	sequence05:253537..255681(+)	partial			WP_000631942.1	phage tail spike protein	65.4	59.7	31.4
MGA_1380	LOCUS_13760	sequence05:258044..258292(+)	partial			WP_000354127.1	phage holin	100.0	58.6	36.8
MGA_1381	LOCUS_13770	sequence05:258292..259077(+)	partial			WP_003244862.1	sporulation-specific N-acetylmuramoyl-L-alanine amidase	68.6	71.4	30.4
MGA_1383	LOCUS_13790	sequence06:873..1931(+)	partial			WP_010989777.1	surface-anchored adhesin LapB	77.8	15.3	30.2
MGA_1446	LOCUS_14420	sequence06:65503..66504(-)	partial			WP_002286007.1	helix-turn-helix domain-containing protein	25.5	11.6	35.3
MGA_1464	LOCUS_14600	sequence06:87757..88017(+)	frameshift		87978	WP_010989535.1	hypothetical protein	98.8	34.3	61.2
MGA_1465	LOCUS_14610	sequence06:88014..88475(+)	frameshift		87978	WP_010989535.1	hypothetical protein	100.0	63.2	73.9
MGA_1533	LOCUS_15280	sequence07:2377..3942(-)	partial			WP_010989982.1	lmo2396 family class 1 internalin	53.4	30.6	43.1
MGA_1560	LOCUS_15550	sequence07:30274..30576(-)	partial			WP_003721833.1	flagellar hook-basal body complex protein FliE	66.0	67.3	69.7
MGA_1622	LOCUS_16170	sequence07:90010..90504(-)	partial			WP_029492212.1	hypothetical protein	71.3	77.0	40.5
MGA_1647	LOCUS_16420	sequence07:114322..114519(-)	partial			WP_010989929.1	PLDc N-terminal domain-containing protein	67.7	67.7	63.6
MGA_1673	LOCUS_16680	sequence07:143542..143778(-)	partial			WP_003723667.1	IDEAL domain-containing protein	100.0	66.1	70.5
MGA_1675	LOCUS_16700	sequence08:125..6697(-)	partial			WP_003243665.1	tRNA nuclease WapA	80.1	73.8	40.3
MGA_1751	LOCUS_17460	sequence08:89946..91109(-)	partial			WP_002317658.1	hydroxymethylglutaryl-CoA reductase, degradative	99.5	47.4	63.9
MGA_1805	LOCUS_17990	sequence09:7184..8797(+)	partial			WP_011836931.1	sensor histidine kinase	46.2	43.6	37.3
MGA_1844	LOCUS_18380	sequence09:49695..50732(-)	partial			WP_011837107.1	ATP-binding protein	76.2	49.7	30.9
MGA_1868	LOCUS_18620	sequence09:79379..81004(-)	partial			WP_010989876.1	class 1 internalin InlL	83.7	72.7	41.5
MGA_1907	LOCUS_19010	sequence10:20943..21242(-)	partial			WP_003722726.1	septation regulator SpoVG	75.8	73.5	97.3
MGA_1946	LOCUS_19400	sequence10:62716..65421(-)	partial			WP_010989427.1	class 1 internalin InlI	85.9	43.0	34.0
MGA_1963	LOCUS_19570	sequence10:88886..89059(+)	frameshift		89047	WP_083498292.1	IS1182 family transposase	98.2	12.0	62.5
MGA_1970	LOCUS_19640	sequence10:94715..95275(+)	frameshift,internal_stop_codon	95273..95275(+)	95536	WP_003234111.1	HD domain-containing protein	95.7	56.0	59.3
MGA_1971	LOCUS_19650	sequence10:95372..95554(+)	frameshift,internal_stop_codon	95273..95275(+)	95536	WP_003234111.1	HD domain-containing protein	93.3	17.2	41.1
MGA_1977	LOCUS_19710	sequence10:98602..>99447(-)	partial			WP_010989340.1	LXG domain-containing protein	76.5	46.7	33.8
MGA_1980	LOCUS_19740	sequence11:733..2241(-)	partial			WP_010989340.1	LXG domain-containing protein	73.5	74.0	44.2
MGA_1994	LOCUS_19880	sequence11:15876..18161(-)	partial			WP_010989657.1	CDP-glycerol glycerophosphotransferase family protein	66.6	72.1	32.2
MGA_1997	LOCUS_19910	sequence11:21412..23526(-)	partial			WP_011674970.1	membrane protein	57.1	63.1	24.8
MGA_2055	LOCUS_20490	sequence11:78673..78867(+)	partial			WP_003722866.1	YkvS family protein	100.0	68.1	89.1
MGA_2061	LOCUS_20550	sequence11:85024..85896(+)	frameshift		85848	WP_010989636.1	acyltransferase family protein	96.2	81.3	64.9
MGA_2062	LOCUS_20560	sequence11:85904..86092(+)	frameshift		85851	WP_010989636.1	acyltransferase family protein	85.5	15.5	52.8
MGA_2129	LOCUS_21230	sequence12:60493..60801(-)	partial			WP_003243257.1	metal-responsive transcriptional regulator AseR	74.5	68.5	43.4
MGA_2133	LOCUS_21270	sequence12:64401..64595(+)	internal_stop_codon	64593..64595(+)		WP_003722198.1	sigma-54-dependent transcriptional regulator	98.4	7.1	69.8
MGA_2167	LOCUS_21610	sequence13:949..4104(+)	partial			WP_011109597.1	Ig-like domain-containing protein	72.2	47.1	25.0
MGA_2228	LOCUS_22220	sequence13:58544..59380(+)	partial			WP_010905351.1	ATP-binding protein	74.8	74.1	29.9
MGA_2236	LOCUS_22300	sequence13:61571..62224(+)	frameshift		62182	WP_000670039.1	DNA (cytosine-5-)-methyltransferase	83.4	41.4	79.0
MGA_2237	LOCUS_22310	sequence13:62298..62516(+)	partial			WP_002286932.1	DNA (cytosine-5-)-methyltransferase	90.3	17.1	76.9
MGA_2240	LOCUS_22340	sequence13:63401..63664(+)	partial			WP_002399578.1	DUF3850 domain-containing protein	82.8	39.1	62.5
MGA_2242	LOCUS_22360	sequence13:64018..64578(+)	frameshift		64548	WP_011475626.1	putative HNHc nuclease	93.0	68.1	37.7
MGA_2273	LOCUS_22670	sequence13:88739..90757(+)	partial			WP_227011156.1	pyocin knob domain-containing protein	33.5	47.1	34.6
MGA_2278	LOCUS_22720	sequence13:91996..92259(+)	partial			WP_000354127.1	phage holin	100.0	60.7	43.3
MGA_2280	LOCUS_22740	sequence13:92491..93336(+)	partial			WP_003229946.1	N-acetylmuramoyl-L-alanine amidase CwlA	56.6	57.7	52.2
MGA_2284	LOCUS_22780	sequence13:94363..94977(-)	partial			WP_011082534.1	recombinase family protein	84.3	34.9	30.2
MGA_2315	LOCUS_23080	sequence14:30499..30819(-)	frameshift		30881	WP_010989515.1	histidine phosphatase family protein	96.2	43.7	43.1
MGA_2316	LOCUS_23090	sequence14:30816..31193(-)	frameshift		30881	WP_010989515.1	histidine phosphatase family protein	88.0	47.6	50.9
MGA_2372	LOCUS_23650	sequence14:86070..87140(+)	partial			WP_002288983.1	hypothetical protein	16.3	34.1	77.6
MGA_2376	LOCUS_23690	sequence15:2485..3687(-)	partial			WP_002296909.1	membrane protein	94.0	68.3	24.7
MGA_2380	LOCUS_23730	sequence15:6800..10813(-)	partial			WP_011109597.1	Ig-like domain-containing protein	94.4	70.8	46.2
MGA_2381	LOCUS_23740	sequence15:11247..11654(-)	frameshift		11616	WP_011016318.1	YfbM family protein	92.6	79.0	38.1
MGA_2403	LOCUS_23960	sequence15:38283..39107(+)	partial			WP_010989982.1	lmo2396 family class 1 internalin	86.1	24.7	38.2
MGA_2409	LOCUS_24020	sequence15:44657..45010(+)	partial			WP_002287731.1	hypothetical protein	82.9	40.2	90.7
MGA_2414	LOCUS_24070	sequence15:53045..54499(-)	partial			WP_010989469.1	helix-turn-helix domain-containing protein	59.9	59.8	22.2
MGA_2418	LOCUS_24110	sequence15:63611..64627(+)	partial			WP_003721845.1	C39 family peptidase	56.8	78.9	52.6
MGA_2419	LOCUS_24120	sequence15:64788..66266(+)	partial			WP_000089347.1	leucine-rich repeat domain-containing protein	24.6	75.4	33.3
MGA_2423	LOCUS_24160	sequence15:68983..69888(-)	partial			WP_002296909.1	membrane protein	82.7	45.9	22.5
MGA_2480	LOCUS_24730	sequence16:33257..33595(+)	partial			WP_010989618.1	glycosyltransferase family 2 protein	88.4	31.4	57.6
MGA_2519	LOCUS_25120	sequence16:73182..73454(-)	partial			WP_003230309.1	branched-chain amino acid dehydrogenase	94.4	23.4	77.6
MGA_2529	LOCUS_25220	sequence16:80470..81177(-)	frameshift		81251	WP_003243665.1	tRNA nuclease WapA	47.2	4.7	60.4
MGA_2533	LOCUS_25260	sequence17:2477..2842(-)	frameshift		2850	WP_003722394.1	NUDIX hydrolase	94.2	84.4	57.0
MGA_2549	LOCUS_25420	sequence17:17053..17793(-)	partial			WP_011101137.1	DNA/RNA non-specific endonuclease	80.5	61.2	57.3
MGA_2550	LOCUS_25430	sequence17:17950..19068(-)	partial			WP_000446856.1	AraC family transcriptional regulator	28.0	34.7	33.6
MGA_2559	LOCUS_25520	sequence17:29548..30105(-)	partial			WP_003436406.1	M15 family metallopeptidase	96.2	66.0	35.4
MGA_2575	LOCUS_25680	sequence17:42456..44831(-)	partial			WP_000527072.1	M4 family metallopeptidase	28.6	26.3	46.2
MGA_2593	LOCUS_25860	sequence18:2172..2480(-)	partial			WP_003722569.1	helix-turn-helix domain-containing protein	85.3	56.3	38.9
MGA_2609	LOCUS_26020	sequence18:24832..26277(+)	partial			WP_000791146.1	M4 family metallopeptidase	59.5	32.1	41.6
MGA_2625	LOCUS_26180	sequence18:42490..44199(-)	partial			WP_010990081.1	class 1 internalin InlJ	67.7	41.1	30.5
MGA_2646	LOCUS_26380	sequence19:6784..7014(-)	partial			WP_003727926.1	preprotein translocase subunit SecG	65.8	64.9	92.0
MGA_2671	LOCUS_26630	sequence19:28954..29442(+)	partial			WP_001039115.1	hypothetical protein	94.4	43.3	31.6
MGA_2689	LOCUS_26810	sequence19:43948..46455(-)	partial			WP_011039046.1	beta-xylosidase	51.4	79.7	28.6
MGA_2701	LOCUS_26930	sequence20:5657..7459(+)	partial			WP_010989422.1	MucBP domain-containing protein	90.0	40.3	39.2
MGA_2707	LOCUS_26990	sequence20:11082..12602(-)	partial			WP_010989520.1	invasion associated endopeptidase	23.3	24.5	80.5
MGA_2711	LOCUS_27030	sequence20:18046..18642(+)	partial			WP_003722255.1	Crp/Fnr family transcriptional regulator	65.2	55.9	24.8
MGA_2713	LOCUS_27050	sequence20:19457..22180(+)	partial			WP_010930196.1	inverse autotransporter beta-barrel domain-containing protein	31.1	24.0	30.2
MGA_2717	LOCUS_27090	sequence20:25522..26841(+)	partial			WP_011461035.1	glycosyltransferase family 4 protein	40.3	49.2	33.5
MGA_2719	LOCUS_27110	sequence20:27977..30130(+)	partial			WP_015776746.1	glycosyltransferase	71.8	83.8	30.5
MGA_2732	LOCUS_27230	sequence21:241..3033(+)	partial			WP_011922118.1	glycosyltransferase family 2 protein	14.0	38.3	39.2
MGA_2743	LOCUS_27340	sequence21:13435..14928(+)	partial			WP_010990081.1	class 1 internalin InlJ	70.2	39.7	38.2
MGA_2761	LOCUS_27520	sequence21:35916..36629(-)	partial			WP_011986706.1	DUF4352 domain-containing protein	28.3	36.2	37.3
MGA_2762	LOCUS_27530	sequence22:234..461(+)	frameshift		347	WP_003722596.1	TetR/AcrR family transcriptional regulator	49.3	18.3	70.3
MGA_2763	LOCUS_27540	sequence22:503..826(+)	frameshift		347	WP_003722596.1	TetR/AcrR family transcriptional regulator	78.5	41.6	57.1
MGA_2783	LOCUS_27740	sequence22:17202..17372(-)	partial			WP_010989432.1	DUF6440 family protein	89.3	69.4	72.0
MGA_2795	LOCUS_27860	sequence22:25710..25907(-)	frameshift		25968	WP_003579256.1	inorganic diphosphatase	100.0	60.2	49.2
MGA_2799	LOCUS_27900	sequence22:28490..29965(-)	partial			WP_010989340.1	LXG domain-containing protein	72.5	71.5	42.4
MGA_2806	LOCUS_27950	sequence23:391..1728(-)	partial			WP_010989355.1	T7SS effector LXG polymorphic toxin	71.2	69.3	42.3
MGA_2809	LOCUS_27980	sequence23:2861..5143(-)	partial			WP_010990081.1	class 1 internalin InlJ	49.7	43.9	36.9
MGA_2835	LOCUS_28240	sequence24:2794..3816(+)	partial			WP_010905766.1	XcbB/CpsF family capsular polysaccharide biosynthesis protein	53.8	42.5	37.0
MGA_2836	LOCUS_28250	sequence24:4143..6686(+)	partial			WP_000527072.1	M4 family metallopeptidase	37.2	37.1	35.5
MGA_2838	LOCUS_28270	sequence24:8168..11239(+)	partial			WP_000791146.1	M4 family metallopeptidase	23.1	27.6	41.7
MGA_2842	LOCUS_28310	sequence24:14811..15293(-)	partial			WP_004399412.1	DUF2975 domain-containing protein	67.5	67.5	63.0
MGA_2856	LOCUS_28440	sequence25:9677..9970(-)	partial			WP_002399578.1	DUF3850 domain-containing protein	81.4	43.5	56.2
MGA_2866	LOCUS_28540	sequence25:14744..17623(-)	partial			WP_211477941.1	SpaA isopeptide-forming pilin-related protein	65.3	43.0	28.5
MGA_2872	LOCUS_28590	sequence26:138..773(+)	partial			WP_003722255.1	Crp/Fnr family transcriptional regulator	75.4	69.4	23.3
MGA_2874	LOCUS_28610	sequence26:1510..3780(+)	partial			WP_010989452.1	class 1 internalin InlF	54.0	46.0	33.5
MGA_2887	LOCUS_28740	sequence27:1762..3852(-)	partial			WP_000791146.1	M4 family metallopeptidase	14.7	12.2	40.0
MGA_2911	LOCUS_28970	sequence28:8150..10057(-)	partial			WP_010989982.1	lmo2396 family class 1 internalin	78.1	53.0	31.3
MGA_2922	LOCUS_29080	sequence29:8697..8906(-)	partial			WP_000237797.1	site-specific integrase	95.7	16.6	84.8
MGA_2924	LOCUS_29100	sequence30:1..864(+)	partial			WP_010989340.1	LXG domain-containing protein	74.2	43.1	40.8
MGA_2935	LOCUS_29190	sequence31:2621..2962(+)	partial			WP_011101778.1	helix-turn-helix transcriptional regulator	62.8	56.7	43.7
MGA_2936	LOCUS_29200	sequence31:3096..4028(+)	partial			WP_115413024.1	Ltp family lipoprotein	39.0	35.0	58.7
MGA_2950	LOCUS_29280	sequence36:357..1154(+)	partial			WP_064242938.1	NAD-dependent DNA ligase LigA	36.2	14.4	31.1
MGA_2954	LOCUS_29300	sequence37:670..1401(-)	partial			WP_001106654.1	hypothetical protein	61.3	75.7	29.6
MGA_2959	LOCUS_29310	sequence40:1..637(+)	partial			WP_009911635.1	tyrosine recombinase XerC	96.2	68.0	38.3