# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_9	LOCUS_00070	sequence1:15841..17916(-)	partial			WP_011020587.1	DUF3656 domain-containing protein	51.4	41.6	39.7
MGA_32	LOCUS_00300	sequence1:39329..42256(-)	partial			WP_002288050.1	helicase-exonuclease AddAB subunit AddA	74.8	69.1	24.5
MGA_49	LOCUS_00470	sequence1:56773..57339(-)	partial			WP_010964535.1	DNA cytosine methyltransferase	98.4	55.4	42.5
MGA_50	LOCUS_00480	sequence1:58292..58981(-)	partial			WP_005115857.1	hypothetical protein	51.1	38.1	33.1
MGA_62	LOCUS_00600	sequence1:72713..72943(-)	partial			WP_000506270.1	conjugal transfer protein	100.0	45.2	100.0
MGA_75	LOCUS_00730	sequence1:83500..84909(-)	partial			WP_010714181.1	VapE family protein	90.4	49.1	30.1
MGA_93	LOCUS_00910	sequence1:99216..100223(-)	partial			WP_010963834.1	YvcK family protein	93.7	69.2	47.3
MGA_111	LOCUS_01090	sequence1:114905..116599(-)	partial			WP_000520865.1	transglutaminase domain-containing protein	43.8	62.4	30.3
MGA_118	LOCUS_01160	sequence1:122339..122539(-)	partial			WP_185623697.1	sigma-70 family RNA polymerase sigma factor	90.9	43.8	58.3
MGA_134	LOCUS_01320	sequence1:141508..142242(+)	internal_stop_codon	142240..142242(+)		WP_011860793.1	relaxase/mobilization nuclease domain-containing protein	100.0	55.1	93.4
MGA_135	LOCUS_01330	sequence1:142309..142839(+)	internal_stop_codon	142240..142242(+)		WP_011860793.1	relaxase/mobilization nuclease domain-containing protein	100.0	39.7	94.9
MGA_138	LOCUS_01360	sequence1:146019..146210(-)	frameshift		146178	WP_002665928.1	type II toxin-antitoxin system YafQ family toxin	82.5	55.9	65.4
MGA_140	LOCUS_01380	sequence1:146814..146963(-)	frameshift,internal_stop_codon	147176..147178(-)	146932	WP_000093392.1	IS200/IS605 family transposase	79.6	24.2	64.1
MGA_141	LOCUS_01390	sequence1:147364..147549(-)	partial			WP_185623697.1	sigma-70 family RNA polymerase sigma factor	83.6	38.0	78.8
MGA_148	LOCUS_01460	sequence1:155620..155814(+)	frameshift,internal_stop_codon	155923..155925(+)	155796	WP_003426139.1	plasmid mobilization relaxosome protein MobC	92.2	50.9	69.5
MGA_149	LOCUS_01470	sequence1:155796..155924(+)	frameshift,internal_stop_codon	155923..155925(+)	155796	WP_011860794.1	plasmid mobilization relaxosome protein MobC	97.6	35.3	63.4
MGA_175	LOCUS_01730	sequence1:187885..188100(-)	partial			WP_003434250.1	DUF3343 domain-containing protein	87.3	71.3	37.1
MGA_184	LOCUS_01820	sequence1:194310..195722(-)	partial			WP_005903647.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	99.8	61.4	34.9
MGA_188	LOCUS_01860	sequence1:197918..199495(-)	partial			WP_003435637.1	trypsin-like peptidase domain-containing protein	47.4	69.4	50.6
MGA_190	LOCUS_01880	sequence1:200415..201248(+)	partial			WP_011947942.1	3D domain-containing protein	78.0	62.5	36.6
MGA_191	LOCUS_01890	sequence1:201245..201814(+)	partial			WP_002382277.1	YdcF family protein	77.8	39.4	30.6
MGA_207	LOCUS_02050	sequence1:219363..220037(-)	partial			WP_011028999.1	TVP38/TMEM64 family protein	54.0	47.4	33.1
MGA_216	LOCUS_02140	sequence1:228065..228532(-)	partial			WP_011073001.1	rhodanese-like domain-containing protein	46.5	54.5	45.8
MGA_236	LOCUS_02340	sequence1:255609..256271(+)	partial			WP_004551250.1	MgtC/SapB family protein	60.9	57.1	52.2
MGA_275	LOCUS_02710	sequence1:305101..306567(-)	partial			WP_011460090.1	hypothetical protein	18.6	31.8	38.0
MGA_281	LOCUS_02770	sequence1:312926..313933(-)	partial			WP_094015776.1	S-layer homology domain-containing protein	64.2	12.4	35.9
MGA_295	LOCUS_02910	sequence1:328321..330114(-)	partial			WP_011393633.1	S-layer homology domain-containing protein	19.6	18.8	35.5
MGA_303	LOCUS_02990	sequence1:336066..337895(-)	partial			WP_003732084.1	DNA polymerase III subunit gamma/tau	55.3	60.4	47.3
MGA_304	LOCUS_03000	sequence1:338034..339005(-)	partial			WP_002667698.1	TlpA disulfide reductase family protein	48.0	70.3	33.3
MGA_305	LOCUS_03010	sequence1:339104..340075(-)	partial			WP_003439354.1	TlpA disulfide reductase family protein	47.4	77.8	27.3
MGA_320	LOCUS_03150	sequence1:352146..353273(+)	partial			WP_003439354.1	TlpA disulfide reductase family protein	44.0	83.5	31.5
MGA_342	LOCUS_03370	sequence1:375887..377128(-)	partial			WP_003358566.1	metal ABC transporter substrate-binding protein	41.9	53.5	28.9
MGA_352	LOCUS_03470	sequence1:386121..388781(-)	partial			WP_013230933.1	DEAD/DEAH box helicase	58.6	79.9	27.6
MGA_358	LOCUS_03530	sequence1:392731..393369(-)	partial			WP_009893393.1	VanZ family protein	67.9	67.7	35.1
MGA_367	LOCUS_03620	sequence1:399224..399865(-)	frameshift		399893	WP_000031832.1	recombinase family protein	97.2	37.0	92.8
MGA_368	LOCUS_03630	sequence1:399876..400253(-)	frameshift,internal_stop_codon	400476..400478(-)	399896	WP_000031832.1	recombinase family protein	96.0	21.5	93.3
MGA_369	LOCUS_03640	sequence1:400476..400721(-)	internal_stop_codon	400476..400478(-)		WP_000031832.1	recombinase family protein	100.0	14.5	98.8
MGA_373	LOCUS_03680	sequence1:405362..405967(-)	partial			WP_010956720.1	TetR/AcrR family transcriptional regulator	60.2	58.7	35.8
MGA_374	LOCUS_03690	sequence1:406340..406495(+)	frameshift		406331	WP_010972061.1	IS3-like element ISAtu3 family transposase	94.1	9.4	56.2
MGA_375	LOCUS_03700	sequence1:406638..407117(-)	partial			WP_011860801.1	MATE family efflux transporter	47.8	16.9	96.1
MGA_379	LOCUS_03740	sequence1:412063..412533(-)	partial			WP_011461241.1	energy-coupling factor transporter transmembrane component T	89.1	59.9	63.3
MGA_382	LOCUS_03770	sequence1:414795..415496(-)	partial			WP_039866225.1	AraC family transcriptional regulator	86.7	62.3	66.3
MGA_383	LOCUS_03780	sequence1:415475..415690(-)	partial			WP_164405696.1	ClbS/DfsB family four-helix bundle protein	100.0	41.3	95.8
MGA_426	LOCUS_04200	sequence1:460010..460972(-)	partial			WP_011392054.1	N-acetylmuramoyl-L-alanine amidase	30.0	14.0	33.3
MGA_427	LOCUS_04210	sequence1:461105..462067(-)	partial			WP_011392054.1	N-acetylmuramoyl-L-alanine amidase	30.0	14.0	33.3
MGA_429	LOCUS_04230	sequence1:463994..467194(-)	partial			WP_015942796.1	InlB B-repeat-containing protein	19.5	11.5	27.6
MGA_444	LOCUS_04380	sequence1:482715..490073(-)	partial			WP_011393633.1	S-layer homology domain-containing protein	4.8	19.7	33.9
MGA_446	LOCUS_04400	sequence1:490598..498679(-)	partial			WP_101886507.1	InlB B-repeat-containing protein	42.5	31.6	21.6
MGA_455	LOCUS_04490	sequence1:508140..508343(-)	partial			WP_000384871.1	S4 domain-containing protein YaaA	98.5	56.4	48.5
MGA_461	LOCUS_04550	sequence1:514556..514690(+)	partial			WP_003420485.1	50S ribosomal protein L34	65.9	64.4	82.8
MGA_463	LOCUS_04570	sequence1:515293..516006(+)	partial			WP_002853384.1	membrane protein insertase YidC	93.7	37.5	37.8
MGA_475	LOCUS_04690	sequence1:527368..531003(+)	partial			WP_011144098.1	S-layer homology domain-containing protein	12.6	28.1	32.2
MGA_490	LOCUS_04840	sequence1:543510..544451(-)	partial			WP_011337511.1	phage major capsid protein	85.9	72.1	28.0
MGA_509	LOCUS_05030	sequence1:567773..570253(+)	partial			WP_011392969.1	S-layer homology domain-containing protein	18.9	17.4	31.4
MGA_523	LOCUS_05170	sequence1:583212..586529(+)	partial			WP_011393824.1	copper amine oxidase N-terminal domain-containing protein	10.2	14.9	34.5
MGA_528	LOCUS_05220	sequence1:591515..593008(+)	partial			WP_162275362.1	TFIIB-type zinc ribbon-containing protein	73.2	82.7	44.8
MGA_550	LOCUS_05420	sequence1:619755..620099(+)	partial			WP_002324544.1	site-specific resolvase TndX	78.9	15.8	50.0
MGA_551	LOCUS_05430	sequence1:620086..621294(+)	partial			WP_002324544.1	site-specific resolvase TndX	93.5	68.1	34.3
MGA_554	LOCUS_05460	sequence1:622532..624016(+)	partial			WP_011241757.1	MobQ family relaxase	52.4	37.8	44.2
MGA_557	LOCUS_05490	sequence1:625290..625448(+)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	100.0	8.8	96.2
MGA_561	LOCUS_05530	sequence1:628669..630129(+)	partial			WP_011241724.1	MobQ family relaxase	93.0	71.0	31.4
MGA_564	LOCUS_05560	sequence1:631367..631828(+)	partial			WP_011860784.1	type IV secretory system conjugative DNA transfer family protein	88.2	22.7	98.5
MGA_571	LOCUS_05630	sequence1:638788..639072(+)	frameshift		639024	WP_185623697.1	sigma-70 family RNA polymerase sigma factor	80.9	55.5	59.2
MGA_596	LOCUS_05880	sequence1:663786..664541(+)	partial			WP_013399425.1	ABC transporter ATP-binding protein	99.6	41.8	32.2
MGA_604	LOCUS_05960	sequence1:674292..674519(+)	partial			WP_005812484.1	type II toxin-antitoxin system HicB family antitoxin	96.0	56.8	37.3
MGA_605	LOCUS_05970	sequence1:674761..675420(+)	frameshift		675414	WP_011460242.1	ferrous iron transport protein B	99.1	30.6	53.9
MGA_606	LOCUS_05980	sequence1:675440..676144(+)	frameshift		675414	WP_011861233.1	ferrous iron transport protein B	73.9	25.5	48.9
MGA_611	LOCUS_06030	sequence1:680287..684303(+)	partial			WP_094015776.1	S-layer homology domain-containing protein	15.3	11.8	34.6
MGA_624	LOCUS_06160	sequence1:694169..696364(+)	partial			WP_010932366.1	AAA family ATPase	65.8	61.1	21.4
MGA_637	LOCUS_06290	sequence1:711789..712442(+)	partial			WP_010972105.1	SIMPL domain-containing protein	75.6	66.4	28.3
MGA_668	LOCUS_06600	sequence1:742858..744435(-)	internal_stop_codon	744439..744441(-),744436..744438(-)		WP_004082447.1	NADH-quinone oxidoreductase subunit NuoF	92.0	79.6	65.7
MGA_699	LOCUS_06910	sequence1:759556..760080(+)	partial			WP_002680559.1	HutD family protein	60.9	51.5	38.3
MGA_710	LOCUS_07020	sequence1:769235..771076(+)	partial			WP_011056105.1	DUF87 domain-containing protein	66.2	68.8	25.1
MGA_715	LOCUS_07070	sequence1:777154..780549(+)	partial			WP_000694240.1	transglutaminase domain-containing protein	27.2	53.4	23.2
MGA_716	LOCUS_07080	sequence1:780708..781280(+)	internal_stop_codon	781278..781280(+)		WP_011023683.1	arsenite methyltransferase	78.9	61.0	48.0
MGA_735	LOCUS_07270	sequence1:797279..797659(+)	partial			WP_011393129.1	helix-turn-helix transcriptional regulator	50.0	20.7	44.4
MGA_738	LOCUS_07300	sequence1:799362..800501(+)	partial			WP_011016476.1	D-serine ammonia-lyase	79.7	69.6	44.0
MGA_746	LOCUS_07380	sequence1:806444..808504(+)	partial			WP_003228938.1	exo-glucosaminidase LytG	22.2	53.5	39.5
MGA_756	LOCUS_07480	sequence1:815068..816048(+)	partial			WP_013098870.1	glutathione S-transferase family protein	74.2	73.8	33.9
MGA_776	LOCUS_07680	sequence1:831876..832865(+)	partial			WP_012048020.1	LCP family protein	68.1	51.9	36.4
MGA_780	LOCUS_07710	sequence1:842174..843457(+)	partial			WP_005668027.1	triphosphoribosyl-dephospho-CoA synthase CitG	60.2	60.0	30.4
MGA_782	LOCUS_07730	sequence1:844146..845297(+)	partial			WP_005811628.1	M23 family metallopeptidase	50.4	42.1	44.8
MGA_808	LOCUS_07990	sequence1:871392..872075(+)	partial			WP_002669021.1	iron transporter	74.9	82.7	80.8
MGA_818	LOCUS_08090	sequence1:880387..881271(+)	partial			WP_002456666.1	exopolyphosphatase	99.3	59.2	27.2
MGA_830	LOCUS_08210	sequence1:898433..899362(+)	partial			WP_014518885.1	ribonuclease H-like domain-containing protein	71.8	84.2	31.0
MGA_861	LOCUS_08520	sequence1:928369..929457(-)	partial			WP_010966051.1	FAD:protein FMN transferase	74.6	79.6	33.1
MGA_865	LOCUS_08560	sequence1:932415..933323(-)	partial			WP_015943647.1	SGNH/GDSL hydrolase family protein	55.3	78.9	26.0
MGA_877	LOCUS_08680	sequence1:947162..947752(+)	partial			WP_005459711.1	spermidine N1-acetyltransferase	49.0	54.5	37.5
MGA_885	LOCUS_08760	sequence1:953778..954263(+)	partial			WP_010946061.1	dihydrofolate reductase	73.3	71.2	35.3
MGA_887	LOCUS_08780	sequence1:955757..956821(+)	internal_stop_codon	955658..955660(+)		WP_005813994.1	MFS transporter	95.8	81.8	25.4
MGA_889	LOCUS_08800	sequence1:958040..959368(-)	partial			WP_197085735.1	DUF2254 domain-containing protein	69.0	73.4	24.6
MGA_894	LOCUS_08850	sequence1:964338..964787(+)	partial			WP_005641953.1	DNA-binding protein	98.0	73.5	32.4
MGA_930	LOCUS_09210	sequence1:999944..1002202(+)	partial			WP_164929452.1	S-layer homology domain-containing protein	14.5	32.8	32.4
MGA_943	LOCUS_09340	sequence1:1019219..1019437(+)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	100.0	12.1	80.6
MGA_947	LOCUS_09380	sequence1:1021530..1021703(+)	partial			WP_000885335.1	helix-turn-helix transcriptional regulator	80.7	63.9	82.6
MGA_949	LOCUS_09400	sequence1:1022228..1023583(+)	partial			WP_011860854.1	M56 family metallopeptidase	55.9	58.7	29.0
MGA_956	LOCUS_09470	sequence1:1027061..1028620(+)	partial			WP_011476660.1	peptide cleavage/export ABC transporter	95.2	71.1	23.6
MGA_988	LOCUS_09760	sequence1:1060182..1061369(+)	frameshift		1061366	WP_004081072.1	bifunctional phosphoglycerate kinase/triose-phosphate isomerase	100.0	60.7	55.4
MGA_1006	LOCUS_09940	sequence1:1083136..1084971(+)	partial			WP_011125196.1	N-acetylmuramoyl-L-alanine amidase	42.6	70.0	29.0
MGA_1029	LOCUS_10170	sequence1:1106697..1109669(-)	partial			WP_012048098.1	PBP1A family penicillin-binding protein	51.5	59.4	33.4
MGA_1036	LOCUS_10240	sequence1:1114238..1114912(+)	partial			WP_010965992.1	TIGR01906 family membrane protein	64.3	63.4	31.5
MGA_1038	LOCUS_10260	sequence1:1115703..1117667(+)	partial			WP_002209564.1	ABC transporter substrate-binding protein	51.8	55.7	25.6
MGA_1040	LOCUS_10280	sequence1:1118746..1120572(+)	partial			WP_002682380.1	ABC transporter permease	37.0	66.6	46.5
MGA_1042	LOCUS_10300	sequence1:1121570..1122988(+)	partial			WP_002682378.1	ATP-binding cassette domain-containing protein	51.5	64.2	65.7
MGA_1050	LOCUS_10380	sequence1:1129096..1130505(+)	partial			WP_009898714.1	transcription termination factor Rho	81.7	71.3	57.4
MGA_1052	LOCUS_10400	sequence1:1131074..1132201(+)	partial			WP_011460395.1	transcription termination factor NusA	90.7	69.0	55.9
MGA_1054	LOCUS_10420	sequence1:1132453..1134702(+)	partial			WP_011460393.1	translation initiation factor IF-2	78.5	60.4	58.5
MGA_1066	LOCUS_10540	sequence1:1145826..1146293(+)	partial			WP_011015925.1	CinA family nicotinamide mononucleotide deamidase-related protein	93.5	35.3	39.0
MGA_1069	LOCUS_10570	sequence1:1148367..1149530(+)	partial			WP_011110011.1	AAA family ATPase	85.8	62.0	29.9
MGA_1077	LOCUS_10650	sequence1:1156872..1157444(+)	partial			WP_164920783.1	transglycosylase SLT domain-containing protein	71.6	20.1	39.6
MGA_1085	LOCUS_10730	sequence1:1164164..1164547(+)	partial			WP_003416526.1	NusG domain II-containing protein	74.8	76.4	33.7
MGA_1087	LOCUS_10750	sequence1:1164787..1165059(+)	partial			WP_005817206.1	Gx transporter family protein	87.8	37.8	45.6
MGA_1091	LOCUS_10790	sequence1:1167096..1170425(+)	partial			WP_011861128.1	penicillin-binding transpeptidase domain-containing protein	55.3	60.6	37.2
MGA_1110	LOCUS_10980	sequence1:1189741..1191093(+)	partial			WP_011861287.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	99.3	54.2	49.7
MGA_1118	LOCUS_11060	sequence1:1199605..1200624(+)	partial			WP_003550130.1	lysylphosphatidylglycerol synthase transmembrane domain-containing protein	71.7	72.1	28.4
MGA_1155	LOCUS_11410	sequence1:1236006..1237148(+)	partial			WP_012048317.1	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	67.6	52.8	36.1
MGA_1161	LOCUS_11470	sequence1:1243866..1244699(-)	frameshift		1244782	WP_141741171.1	IS3 family transposase	98.6	57.7	53.8
MGA_1162	LOCUS_11480	sequence1:1244723..1245316(-)	frameshift		1244782	WP_141741171.1	IS3 family transposase	96.4	36.6	37.4
MGA_1164	LOCUS_11500	sequence1:1246638..1247078(-)	frameshift		1247092	WP_011393630.1	5-formyltetrahydrofolate cyclo-ligase	94.5	69.8	44.0
MGA_1167	LOCUS_11530	sequence1:1249220..1249990(+)	frameshift		1249202	WP_011391790.1	peptidoglycan DD-metalloendopeptidase family protein	97.3	67.1	39.5
MGA_1168	LOCUS_11540	sequence1:1250011..1250565(+)	frameshift,internal_stop_codon	1250632..1250634(+)	1250754,1250538	WP_003228041.1	carboxy-terminal processing protease CtpB	62.5	23.5	35.7
MGA_1169	LOCUS_11550	sequence1:1250753..1251238(+)	frameshift,internal_stop_codon	1250621..1250623(+),1250618..1250620(+)	1250746,1250665,1250538,1250607	WP_011391791.1	S41 family peptidase	100.0	42.1	45.1
MGA_1176	LOCUS_11620	sequence1:1258004..1258543(+)	frameshift,internal_stop_codon	1258014..1258016(+)	1258532,1258031	WP_004080600.1	YgcG family protein	81.0	61.3	38.4
MGA_1179	LOCUS_11650	sequence1:1259624..1260697(+)	frameshift		1259546	WP_003417090.1	trigger factor	97.2	83.6	41.3
MGA_1183	LOCUS_11690	sequence1:1263337..1264758(+)	frameshift		1264689,1264734	WP_003357593.1	endopeptidase La	94.9	58.5	55.0
MGA_1184	LOCUS_11700	sequence1:1264829..1265059(+)	frameshift		1264698,1264734	WP_003405352.1	endopeptidase La	90.8	8.6	50.7
MGA_1190	LOCUS_11760	sequence1:1268777..1269727(+)	frameshift		1268705	WP_002457116.1	cardiolipin synthase	99.1	64.0	53.8
MGA_1192	LOCUS_11780	sequence1:1272088..1272561(+)	frameshift		1272578,1272547,1271868,1272045	WP_003358892.1	tyrosine recombinase XerC	96.2	46.3	52.3
MGA_1195	LOCUS_11810	sequence1:1273916..1274224(-)	frameshift		1274358	WP_011861408.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	92.2	30.5	40.8
MGA_1196	LOCUS_11820	sequence1:1274356..1274871(-)	frameshift		1274361	WP_010965140.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	96.5	53.1	52.7
MGA_1197	LOCUS_11830	sequence1:1274868..1275467(-)	partial			WP_011861409.1	DNA mismatch repair endonuclease MutL	96.5	28.9	44.8
MGA_1199	LOCUS_11850	sequence1:1276161..1276808(-)	frameshift		1275968,1276217,1276037	WP_011861409.1	DNA mismatch repair endonuclease MutL	96.3	33.0	51.2
MGA_1200	LOCUS_11860	sequence1:1276809..1277660(-)	frameshift		1277633,1277777,1277597,1277849,1277675,1277741	WP_012583439.1	DNA mismatch repair protein MutS	90.8	30.2	51.5
MGA_1201	LOCUS_11870	sequence1:1277832..1278194(-)	frameshift,internal_stop_codon	1278353..1278355(-)	1277601,1278313,1278187,1277742,1277778,1277682,1277847,1278361,1277631	WP_012047675.1	DNA mismatch repair protein MutS	95.0	12.9	41.7
MGA_1203	LOCUS_11890	sequence1:1278763..1279086(-)	frameshift		1279109	WP_010965142.1	DNA mismatch repair protein MutS	86.9	10.9	34.0
MGA_1204	LOCUS_11900	sequence1:1279083..1279334(-)	frameshift		1279109	WP_003435264.1	DNA mismatch repair protein MutS	100.0	8.8	51.8
MGA_1205	LOCUS_11910	sequence1:1279551..1279820(-)	frameshift,internal_stop_codon	1279881..1279883(-)	1279577,1279562,1279514,1279373	WP_010965143.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	92.1	18.6	59.8
MGA_1206	LOCUS_11920	sequence1:1279881..1280204(-)	frameshift,internal_stop_codon	1279878..1279880(-)	1280360,1280222,1280438	WP_003435252.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	96.3	21.5	70.9
MGA_1207	LOCUS_11930	sequence1:1280421..1280603(-)	frameshift		1280360,1280225,1280429	WP_005811605.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	96.7	13.0	50.0
MGA_1208	LOCUS_11940	sequence1:1280775..1282136(-)	frameshift		1282203,1282230	WP_010965152.1	bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1	85.0	59.5	39.1
MGA_1210	LOCUS_11960	sequence1:1283621..1284385(-)	frameshift		1283578,1283626,1283539	WP_003439454.1	(d)CMP kinase	53.9	63.4	51.8
MGA_1211	LOCUS_11970	sequence1:1284394..1285293(-)	frameshift		1285569,1285332,1285452	WP_011986386.1	NAD(P)/FAD-dependent oxidoreductase	99.3	70.8	40.8
MGA_1212	LOCUS_11980	sequence1:1285782..1286018(-)	frameshift		1286126,1286081,1285787,1286150	WP_003424273.1	MurR/RpiR family transcriptional regulator	89.7	24.1	47.1
MGA_1213	LOCUS_11990	sequence1:1286133..1286357(-)	frameshift,internal_stop_codon	1286093..1286095(-),1286114..1286116(-),1286132..1286134(-)	1286362	WP_010965155.1	MurR/RpiR family transcriptional regulator	93.2	23.9	37.1
MGA_1214	LOCUS_12000	sequence1:1286555..1286761(-)	frameshift		1286577,1286571,1286919	WP_001830894.1	class I SAM-dependent methyltransferase	89.7	32.6	42.6
MGA_1215	LOCUS_12010	sequence1:1287035..1287280(-)	frameshift,internal_stop_codon	1287345..1287347(-)	1287299,1287359	WP_002294391.1	pseudouridine synthase	95.1	33.2	41.8
MGA_1218	LOCUS_12040	sequence1:1288953..1289189(-)	frameshift		1289191	WP_164930880.1	site-2 protease family protein	87.2	31.6	50.0
MGA_1219	LOCUS_12050	sequence1:1289189..1289554(-)	frameshift		1289194	WP_009902398.1	site-2 protease family protein	91.7	56.1	43.2
MGA_1221	LOCUS_12070	sequence1:1290275..1290847(-)	frameshift		1290277	WP_012583823.1	pyrimidine-nucleoside phosphorylase	99.5	43.5	52.9
MGA_1224	LOCUS_12100	sequence1:1291714..1291935(-)	frameshift,internal_stop_codon	1291606..1291608(-),1291984..1291986(-),1292051..1292053(-)	1292176,1291893,1291914,1292008,1291722	WP_009896126.1	DNA repair protein RecN	83.6	10.7	44.3
MGA_1229	LOCUS_12150	sequence1:1295109..1297121(-)	frameshift,internal_stop_codon	1297201..1297203(-)	1297188	WP_003438301.1	PolC-type DNA polymerase III	100.0	46.3	54.3
MGA_1230	LOCUS_12160	sequence1:1297201..1297509(-)	frameshift,internal_stop_codon	1297190..1297192(-)	1297208,1297598	WP_011986794.1	PolC-type DNA polymerase III	98.0	7.0	35.0
MGA_1231	LOCUS_12170	sequence1:1297593..1298417(-)	frameshift		1297613	WP_011986794.1	PolC-type DNA polymerase III	93.4	17.9	47.7
MGA_1233	LOCUS_12190	sequence1:1299443..1299826(-)	frameshift		1299392,1299477,1299894	WP_011986795.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	90.6	33.0	62.6
MGA_1234	LOCUS_12200	sequence1:1299889..1300320(-)	frameshift		1299899,1300373	WP_011861462.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	98.6	40.2	49.6
MGA_1236	LOCUS_12220	sequence1:1301087..1301407(-)	frameshift		1301089	WP_003384669.1	RIP metalloprotease RseP	100.0	31.5	48.1
MGA_1237	LOCUS_12230	sequence1:1302171..1302386(-)	frameshift,internal_stop_codon	1302515..1302517(-),1302509..1302511(-),1302518..1302520(-)	1302536,1302481,1302360	WP_004081614.1	isoprenyl transferase	94.4	29.2	55.9
MGA_1239	LOCUS_12250	sequence1:1302531..1302785(-)	frameshift,internal_stop_codon	1302530..1302532(-)	1302784,1302355,1302487	WP_004440346.1	isoprenyl transferase	95.2	31.7	51.2
MGA_1240	LOCUS_12260	sequence1:1302947..1303438(-)	frameshift		1303009,1302955,1302925	WP_011392549.1	ribosome recycling factor	95.1	84.3	54.5
MGA_1255	LOCUS_12410	sequence1:1315344..1315862(-)	frameshift		1315361,1315322	WP_002674428.1	copper homeostasis protein CutC	84.9	59.3	47.3
MGA_1256	LOCUS_12420	sequence1:1316075..1316527(+)	partial			WP_010908986.1	alpha/beta hydrolase	69.3	35.1	35.6
MGA_1257	LOCUS_12430	sequence1:1316481..1316891(+)	frameshift		1316521	WP_003723559.1	alpha/beta hydrolase	70.6	31.7	28.9
MGA_1258	LOCUS_12440	sequence1:1316907..1318016(-)	partial			WP_010941361.1	SpoIIE family protein phosphatase	98.1	59.0	24.1
MGA_1261	LOCUS_12470	sequence1:1319971..1320900(+)	frameshift		1320868,1320934,1319839	WP_010963956.1	tyrosine--tRNA ligase	97.1	73.2	52.3
MGA_1262	LOCUS_12480	sequence1:1321039..1321335(-)	frameshift,internal_stop_codon	1321447..1321449(-)	1321425,1321482,1321452	WP_080510938.1	alkaline phosphatase	94.9	17.3	60.2
MGA_1263	LOCUS_12490	sequence1:1321477..1322136(-)	frameshift,internal_stop_codon	1321445..1321447(-)	1322371,1321480,1321450,1322395,1321423	WP_080510938.1	alkaline phosphatase	98.2	40.4	58.1
MGA_1267	LOCUS_12530	sequence1:1326264..1326530(-)	frameshift		1326640,1326537,1326597,1326686	WP_003244388.1	ATP synthase F1 subunit gamma	92.0	28.2	63.0
MGA_1268	LOCUS_12540	sequence1:1326615..1327112(-)	frameshift		1326944,1326640,1326598,1326998,1326526	WP_003437835.1	ATP synthase F1 subunit gamma	97.0	54.5	39.1
MGA_1270	LOCUS_12560	sequence1:1327243..1328484(-)	frameshift		1328559,1328571,1327251,1328583	WP_003421367.1	F0F1 ATP synthase subunit alpha	99.3	82.0	75.4
MGA_1274	LOCUS_12600	sequence1:1329677..1329934(-)	partial			WP_005902609.1	ATP synthase F0 subunit C	76.5	73.0	73.8
MGA_1277	LOCUS_12630	sequence1:1332055..1332399(-)	frameshift		1332059,1332443,1332020	WP_010706591.1	ABC transporter permease	91.2	11.8	26.9
MGA_1278	LOCUS_12640	sequence1:1332619..1332870(-)	frameshift		1332626,1332524,1332437,1332878	WP_002262182.1	FtsX-like permease family protein	91.6	8.8	42.9
MGA_1284	LOCUS_12700	sequence1:1338212..1338955(-)	frameshift		1339007,1339127	WP_002669699.1	branched-chain amino acid transport system II carrier protein	95.1	55.6	40.8
MGA_1286	LOCUS_12720	sequence1:1339119..1339523(-)	frameshift,internal_stop_codon	1339008..1339010(-)	1339016,1339130	WP_011948515.1	branched-chain amino acid transport system II carrier protein	97.8	29.9	49.6
MGA_1289	LOCUS_12750	sequence1:1341873..1342538(-)	frameshift,internal_stop_codon	1342558..1342560(-)	1342650,1342575	WP_003435007.1	DNA glycosylase	97.7	73.2	45.8
MGA_1294	LOCUS_12800	sequence1:1345694..1346737(+)	frameshift		1346725,1346734	WP_003434478.1	ABC-F family ATP-binding cassette domain-containing protein	100.0	55.7	39.4
MGA_1295	LOCUS_12810	sequence1:1347003..1347581(+)	partial			WP_003434478.1	ABC-F family ATP-binding cassette domain-containing protein	96.4	29.2	43.9
MGA_1296	LOCUS_12820	sequence1:1347583..1347996(+)	frameshift		1348113,1348035,1347942	WP_004082842.1	ABC transporter ATP-binding protein	97.8	65.0	44.0
MGA_1297	LOCUS_12830	sequence1:1348338..1348985(+)	frameshift		1348279	WP_004082840.1	iron export ABC transporter permease subunit FetB	99.5	83.6	53.0
MGA_1300	LOCUS_12860	sequence1:1350251..1350949(-)	frameshift		1350265,1350201	WP_004081416.1	TIGR01212 family radical SAM protein	92.7	70.0	40.3
MGA_1303	LOCUS_12890	sequence1:1352645..1352887(-)	frameshift		1353090	WP_009889131.1	peptidylprolyl isomerase	92.5	29.5	52.7
MGA_1305	LOCUS_12910	sequence1:1353557..1354726(+)	frameshift		1354708	WP_010921977.1	DUF853 family protein	98.2	77.0	51.0
MGA_1306	LOCUS_12920	sequence1:1355050..1355262(-)	frameshift		1355267	WP_005790218.1	cupin domain-containing protein	92.9	60.2	55.4
MGA_1310	LOCUS_12960	sequence1:1358752..1359336(-)	partial			WP_005693825.1	class I SAM-dependent methyltransferase	95.4	74.1	42.5
MGA_1321	LOCUS_13070	sequence1:1370747..1371316(-)	frameshift		1370761	WP_011017072.1	polyprenyl synthetase family protein	96.8	60.9	41.7
MGA_1324	LOCUS_13100	sequence1:1372136..1372972(-)	partial			WP_010965382.1	exodeoxyribonuclease VII large subunit	91.0	63.7	46.3
MGA_1325	LOCUS_13110	sequence1:1372965..1373384(-)	partial			WP_003699843.1	transcription antitermination factor NusB	72.7	78.6	41.9
MGA_1327	LOCUS_13130	sequence1:1373788..1374126(-)	partial			WP_003428343.1	hypothetical protein	60.7	45.0	42.6
MGA_1338	LOCUS_13240	sequence1:1380161..1380916(-)	frameshift		1381088,1381100	WP_003435622.1	GspE/PulE family protein	90.8	52.5	38.9
MGA_1340	LOCUS_13260	sequence1:1381618..1382256(-)	frameshift,internal_stop_codon	1381563..1381565(-),1381617..1381619(-)	1382465,1381475	WP_011986881.1	U32 family peptidase	91.5	47.5	61.3
MGA_1341	LOCUS_13270	sequence1:1382719..1383147(-)	frameshift		1382763,1382589	WP_011986882.1	O-methyltransferase	72.5	47.2	44.8
MGA_1343	LOCUS_13290	sequence1:1384308..1384655(-)	frameshift,internal_stop_codon	1384170..1384172(-)	1384310	WP_012583841.1	QueT transporter family protein	72.2	50.3	51.8
MGA_1347	LOCUS_13330	sequence1:1387763..1388824(-)	partial			WP_009896376.1	DNA primase	98.3	62.2	26.5
MGA_1348	LOCUS_13340	sequence1:1389160..1389489(-)	frameshift		1389171	WP_010964611.1	DNA primase	91.7	16.8	53.0
MGA_1349	LOCUS_13350	sequence1:1389486..1389755(-)	frameshift		1389796	WP_012258767.1	deoxyguanosinetriphosphate triphosphohydrolase	89.9	23.6	38.1
MGA_1350	LOCUS_13360	sequence1:1389743..1390318(-)	frameshift		1389781	WP_011392159.1	deoxyguanosinetriphosphate triphosphohydrolase	93.7	52.9	64.8
MGA_1352	LOCUS_13380	sequence1:1391319..1392791(-)	frameshift		1392900,1392831	WP_011861551.1	glycine--tRNA ligase subunit beta	98.8	69.5	42.2
MGA_1353	LOCUS_13390	sequence1:1392892..1393077(-)	frameshift		1393120,1392898,1393204,1392829,1393310	WP_011861551.1	glycine--tRNA ligase subunit beta	96.7	8.6	44.1
MGA_1354	LOCUS_13400	sequence1:1393387..1393992(-)	frameshift		1394167	WP_003416656.1	glycine--tRNA ligase subunit alpha	96.0	66.1	65.3
MGA_1355	LOCUS_13410	sequence1:1394156..1394275(-)	frameshift		1394161	WP_011141446.1	glycine--tRNA ligase subunit alpha	94.9	12.8	62.2
MGA_1358	LOCUS_13440	sequence1:1394984..1395691(-)	frameshift		1395725	WP_003416645.1	GTPase Era	99.6	80.1	37.4
MGA_1359	LOCUS_13450	sequence1:1395711..1395860(-)	frameshift		1395725	WP_003416645.1	GTPase Era	93.9	15.5	63.0
MGA_1361	LOCUS_13470	sequence1:1396311..1397378(-)	frameshift		1397473	WP_011861553.1	PhoH family protein	58.9	61.8	67.9
MGA_1365	LOCUS_13510	sequence1:1399254..1399919(-)	partial			WP_003230024.1	nodulation protein NfeD	92.3	46.7	22.6
MGA_1379	LOCUS_13650	sequence1:1412683..1413129(-)	partial			WP_001830630.1	pyruvate, water dikinase regulatory protein	95.9	52.2	42.3
MGA_1380	LOCUS_13660	sequence1:1413196..1413465(-)	frameshift		1413496	WP_029494805.1	phosphoribosylformylglycinamidine synthase	96.6	7.8	49.5
MGA_1390	LOCUS_13760	sequence1:1423748..1424383(-)	partial			WP_011392017.1	AAA family ATPase	80.1	13.7	26.3
MGA_1391	LOCUS_13770	sequence1:1424946..1425665(-)	partial			WP_011101396.1	AAA family ATPase	38.5	10.3	41.3
MGA_1409	LOCUS_13950	sequence1:1441859..1442878(-)	partial			WP_011393082.1	copper amine oxidase N-terminal domain-containing protein	30.4	57.4	35.8
MGA_1410	LOCUS_13960	sequence1:1443718..1447362(-)	frameshift		1443777	WP_015942796.1	InlB B-repeat-containing protein	33.0	25.6	28.7
MGA_1411	LOCUS_13970	sequence1:1447542..1454522(-)	partial			WP_010989425.1	lmo0331 family class 1 internalin	13.5	48.3	44.1
MGA_1412	LOCUS_13980	sequence1:1455375..1456346(-)	partial			WP_011861272.1	ABC transporter permease	77.4	36.2	26.8
MGA_1445	LOCUS_14310	sequence1:1483803..1484693(-)	partial			WP_011861159.1	signal recognition particle-docking protein FtsY	98.6	68.3	56.1
MGA_1446	LOCUS_14320	sequence1:1484906..1486303(-)	frameshift		1486277	WP_003232028.1	chromosome segregation protein SMC	99.8	41.3	30.6
MGA_1447	LOCUS_14330	sequence1:1486275..1488404(-)	frameshift		1486286	WP_012047863.1	chromosome segregation protein SMC	98.7	59.8	35.8
MGA_1476	LOCUS_14620	sequence1:1517698..1517883(-)	partial			WP_010965026.1	DNA-directed RNA polymerase subunit omega	83.6	70.8	49.0
MGA_1484	LOCUS_14700	sequence1:1523587..1524036(-)	partial			WP_003416162.1	cell division protein SepF	68.5	68.4	49.0
MGA_1500	LOCUS_14860	sequence1:1541256..1541654(-)	partial			WP_001141952.1	energy-coupling factor transporter transmembrane component T	100.0	57.1	91.7
MGA_1507	LOCUS_14930	sequence1:1548678..1549703(-)	partial			WP_009903185.1	C40 family peptidase	79.8	74.0	35.8
MGA_1511	LOCUS_14970	sequence1:1554431..1556029(-)	partial			WP_011393574.1	stalk domain-containing protein	22.4	15.1	34.7
MGA_1512	LOCUS_14980	sequence1:1556164..1557045(-)	partial			WP_011393633.1	S-layer homology domain-containing protein	54.6	27.3	29.4
MGA_1532	LOCUS_15180	sequence1:1572166..1573515(-)	partial			WP_001830867.1	ATP-binding protein	49.4	39.5	35.3
MGA_1534	LOCUS_15200	sequence1:1574271..1574459(-)	internal_stop_codon	1574511..1574513(-)		WP_002667009.1	glutaredoxin domain-containing protein	83.9	57.8	50.0
MGA_1545	LOCUS_15310	sequence1:1588429..1589562(-)	partial			WP_011057687.1	phosphodiester glycosidase family protein	79.8	47.5	23.1
MGA_1548	LOCUS_15340	sequence1:1591406..1592158(-)	partial			WP_009892118.1	ECF transporter S component	52.0	74.5	38.9
MGA_1580	LOCUS_15660	sequence1:1622959..1625166(-)	partial			WP_011476570.1	AAA family ATPase	72.4	57.0	42.6
