{ "type": "genome", "identifier": "GCF_944737995.1", "organism": "Vibrio aestuarianus subsp. francensis", "title": "Vibrio aestuarianus subsp. francensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "STATION BIOLOGIQUE DE ROSCOFF", "publication": [ {} ], "properties": { "assembly_accession": "GCF_944737995.1", "bioproject": "PRJNA224116", "biosample": "SAMEA110138230", "wgs_master": "CALYKZ000000000.1", "refseq_category": "na", "taxid": "1443279", "species_taxid": "28171", "organism_name": "Vibrio aestuarianus subsp. francensis", "infraspecific_name": "strain=02/041", "isolate": "na", "version_status": "latest", "assembly_level": "Chromosome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/07/28", "asm_name": "Vibrio_aestuarianus_02_041", "asm_submitter": "STATION BIOLOGIQUE DE ROSCOFF", "gbrs_paired_asm": "GCA_944737995.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/944/737/995/GCF_944737995.1_Vibrio_aestuarianus_02_041", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4196441", "genome_size_ungapped": "4195841", "gc_percent": "43.000000", "replicon_count": "2", "scaffold_count": "2", "contig_count": "8", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_944737995.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "3937", "protein_coding_gene_count": "3698", "non_coding_gene_count": "107", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-07-28", "dateModified": "2022-07-28", "datePublished": "2022-07-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Vibrio aestuarianus subsp. francensis" ], "sample_taxid": [ "1443279" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "France" ], "sample_host_location_id": [], "data_size": "1.183 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4196441", "Number of Sequences": "2", "Longest Sequences (bp)": "2986630", "N50 (bp)": "2986630", "Gap Ratio (%)": "0.014322", "GCcontent (%)": "42.8", "Number of CDSs": "3804", "Average Protein Length": "310.0", "Coding Ratio (%)": "84.3", "Number of rRNAs": "21", "Number of tRNAs": "83", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Vibrio aestuarianus subsp. francensis", "strain": "strain=02/041", "accession": "GCA_012395215.1", "taxid": 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