# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_5	LOCUS_00040	sequence01:3400..4023(+)	frameshift		3981	WP_012609229.1	hypothetical protein	72.0	67.3	40.0
MGA_20	LOCUS_00190	sequence01:16979..17257(-)	frameshift		17545,17529	WP_011402801.1	hypothetical protein	98.9	26.0	73.6
MGA_21	LOCUS_00200	sequence01:17531..18046(-)	frameshift		17545,17529	WP_011402801.1	hypothetical protein	90.1	46.0	52.8
MGA_37	LOCUS_00360	sequence01:34818..35111(-)	frameshift,internal_stop_codon	35147..35149(-)	35110	WP_205421566.1	DNA-directed RNA polymerase subunit omega	100.0	80.2	97.9
MGA_80	LOCUS_00790	sequence01:88781..90640(+)	frameshift,internal_stop_codon	88504..88506(+)	88593	WP_118837896.1	response regulator	99.8	76.7	79.9
MGA_100	LOCUS_00990	sequence01:127304..127990(+)	partial			WP_118837916.1	hypothetical protein	97.8	65.8	83.0
MGA_103	LOCUS_01020	sequence01:130165..130494(+)	partial			WP_118837917.1	tetratricopeptide repeat protein	100.0	72.7	97.2
MGA_120	LOCUS_01190	sequence01:154658..155011(+)	frameshift,internal_stop_codon	155009..155011(+)	154602	WP_011402909.1	hypothetical protein	100.0	47.0	84.6
MGA_121	LOCUS_01200	sequence01:155410..155913(+)	partial			WP_118837876.1	hypothetical protein	60.5	60.1	36.6
MGA_123	LOCUS_01220	sequence01:157849..158208(+)	frameshift		157793	WP_012256013.1	M24 family metallopeptidase	93.3	26.7	55.0
MGA_126	LOCUS_01250	sequence01:163408..164124(+)	frameshift,internal_stop_codon	163356..163358(+)	163312,163406	WP_118837938.1	hypothetical protein	100.0	84.1	86.6
MGA_129	LOCUS_01280	sequence01:166213..168069(-)	partial			WP_062695564.1	family 20 glycosylhydrolase	89.5	66.0	44.7
MGA_135	LOCUS_01340	sequence01:177242..178459(-)	partial			WP_118840167.1	T9SS type A sorting domain-containing protein	91.6	65.8	34.5
MGA_136	LOCUS_01350	sequence01:178508..180334(-)	partial			WP_004536696.1	ESPR-type extended signal peptide-containing protein	61.8	23.4	27.5
MGA_137	LOCUS_01360	sequence01:180430..181689(-)	partial			WP_011205034.1	YadA-like family protein	41.5	15.7	36.1
MGA_138	LOCUS_01370	sequence01:182123..183715(-)	partial			WP_103020212.1	methyl-accepting chemotaxis protein	72.6	42.7	43.3
MGA_149	LOCUS_01480	sequence01:196250..198715(+)	partial			WP_011144294.1	polysaccharide biosynthesis tyrosine autokinase	74.3	80.1	26.7
MGA_154	LOCUS_01530	sequence01:203338..204474(+)	partial			WP_014877983.1	GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase	63.5	64.9	39.0
MGA_159	LOCUS_01580	sequence01:208167..209411(+)	partial			WP_011020110.1	asparagine synthetase B	70.8	50.2	25.1
MGA_160	LOCUS_01590	sequence01:209461..210495(+)	partial			WP_010965473.1	glycosyltransferase	58.7	61.9	40.4
MGA_166	LOCUS_01650	sequence01:215688..216911(+)	partial			WP_012583778.1	glycosyltransferase	54.3	41.6	28.3
MGA_170	LOCUS_01690	sequence01:219951..220961(+)	partial			WP_001292317.1	glycosyltransferase family 2 protein	38.7	42.7	36.2
MGA_172	LOCUS_01710	sequence01:222219..222932(+)	internal_stop_codon	222930..222932(+)		WP_011057430.1	glycosyltransferase family 4 protein	83.5	55.3	42.9
MGA_178	LOCUS_01770	sequence01:228877..230049(+)	partial			WP_011249842.1	glycosyltransferase family 4 protein	41.0	41.3	36.7
MGA_189	LOCUS_01880	sequence01:244965..245930(+)	partial			WP_011122401.1	glycosyltransferase	61.7	38.0	34.4
MGA_198	LOCUS_01970	sequence01:255932..257923(-)	partial			WP_118840167.1	T9SS type A sorting domain-containing protein	33.6	39.2	43.6
MGA_200	LOCUS_01990	sequence01:258189..260951(-)	partial			WP_164928531.1	endonuclease/exonuclease/phosphatase family protein	37.1	33.1	30.6
MGA_211	LOCUS_02100	sequence01:278487..279668(-)	partial			WP_118837953.1	hypothetical protein	96.2	69.9	54.3
MGA_237	LOCUS_02360	sequence01:305463..305639(-)	partial			WP_048126054.1	CDGSH iron-sulfur domain-containing protein	74.1	20.0	51.2
MGA_240	LOCUS_02390	sequence01:306763..309048(-)	partial			WP_118838062.1	M56 family metallopeptidase	98.6	65.8	51.0
MGA_257	LOCUS_02560	sequence01:336631..336876(+)	frameshift,internal_stop_codon	336875..336877(+),337010..337012(+),336764..336766(+)	336769,336717	WP_118838081.1	heavy metal translocating P-type ATPase	74.1	8.4	53.3
MGA_260	LOCUS_02590	sequence01:340100..341449(+)	partial			WP_008766785.1	AraC family transcriptional regulator	30.3	23.3	30.0
MGA_283	LOCUS_02820	sequence01:372916..373269(+)	internal_stop_codon	373267..373269(+)		WP_011028423.1	S41 family peptidase	77.8	8.6	35.9
MGA_284	LOCUS_02830	sequence01:373426..376161(+)	internal_stop_codon	373267..373269(+)		WP_005793715.1	S41 family peptidase	97.7	82.0	31.8
MGA_285	LOCUS_02840	sequence01:376441..376854(+)	frameshift		376430	WP_043552924.1	hypothetical protein	100.0	84.6	76.6
MGA_289	LOCUS_02880	sequence01:381927..383903(-)	partial			WP_011140379.1	PAS domain-containing sensor histidine kinase	72.8	84.6	37.0
MGA_296	LOCUS_02950	sequence01:393891..396845(+)	partial			WP_118838100.1	PAS domain-containing protein	90.1	69.7	68.2
MGA_298	LOCUS_02970	sequence01:399214..399984(+)	frameshift		399861	WP_002288633.1	glycosyl hydrolase 53 family protein	69.5	35.0	39.5
MGA_299	LOCUS_02980	sequence01:400002..400325(+)	frameshift		399861	WP_012311219.1	glycosyl hydrolase 53 family protein	85.0	18.6	33.9
MGA_306	LOCUS_03050	sequence01:412997..414853(+)	internal_stop_codon	412823..412825(+)		WP_011403141.1	glycoside hydrolase family 13 protein	72.8	72.8	88.2
MGA_318	LOCUS_03170	sequence01:436117..436287(+)	internal_stop_codon	436063..436065(+)		WP_011403154.1	hypothetical protein	100.0	73.7	100.0
MGA_320	LOCUS_03190	sequence01:436530..436799(-)	frameshift		436805,436829	WP_011403156.1	hypothetical protein	100.0	77.4	94.4
MGA_333	LOCUS_03320	sequence01:451467..451691(+)	partial			WP_011403170.1	TonB-dependent receptor	82.4	8.5	75.8
MGA_376	LOCUS_03750	sequence01:496465..496671(+)	frameshift		496329,496341	WP_011403212.1	glycine betaine ABC transporter substrate-binding protein	97.1	19.5	84.8
MGA_384	LOCUS_03830	sequence01:508324..509034(-)	frameshift		509210	WP_118838153.1	phosphate signaling complex protein PhoU	100.0	76.6	94.9
MGA_386	LOCUS_03850	sequence01:510413..511648(-)	frameshift		511654,511670,511806,511863	WP_118838154.1	glycosyltransferase family 1 protein	100.0	82.0	88.8
MGA_398	LOCUS_03970	sequence01:530179..530622(+)	frameshift,internal_stop_codon	530103..530105(+)	530165,530135	WP_118838163.1	deoxycytidine triphosphate deaminase	100.0	78.6	87.8
MGA_407	LOCUS_04060	sequence01:540774..543431(-)	partial			WP_198598621.1	PAS domain S-box protein	27.9	17.6	61.1
MGA_409	LOCUS_04080	sequence01:550791..551015(-)	partial			WP_118838170.1	hypothetical protein	93.2	57.0	66.7
MGA_414	LOCUS_04130	sequence01:559862..560542(-)	frameshift		560624	WP_118838175.1	TetR/AcrR family transcriptional regulator	95.1	68.9	74.9
MGA_421	LOCUS_04200	sequence01:571149..575381(-)	partial			WP_118838180.1	hybrid sensor histidine kinase/response regulator	35.8	38.2	56.0
MGA_440	LOCUS_04390	sequence01:593302..593559(-)	frameshift		593714	WP_118826026.1	hypothetical protein	100.0	54.8	98.8
MGA_470	LOCUS_04690	sequence01:624769..625413(+)	partial			WP_118838206.1	L,D-transpeptidase family protein	100.0	70.4	91.1
MGA_476	LOCUS_04750	sequence01:633760..634131(+)	frameshift		633629	WP_118838220.1	hypothetical protein	97.6	60.3	79.2
MGA_481	LOCUS_04800	sequence01:637572..637832(-)	partial			WP_118838224.1	macro domain-containing protein	65.1	29.8	73.2
MGA_483	LOCUS_04820	sequence01:639079..639486(+)	frameshift,internal_stop_codon	639000..639002(+)	638993,638981	WP_118838226.1	CBS domain-containing protein	100.0	65.2	95.6
MGA_490	LOCUS_04890	sequence01:644656..645018(+)	partial			WP_011403330.1	hypothetical protein	100.0	72.7	91.7
MGA_506	LOCUS_05050	sequence01:669895..670506(+)	partial			WP_011122211.1	alpha-1,2-fucosyltransferase	96.6	63.0	33.5
MGA_518	LOCUS_05170	sequence01:685361..685948(-)	partial			WP_142454231.1	hypothetical protein	86.2	46.5	40.0
MGA_519	LOCUS_05180	sequence01:686217..687788(-)	partial			WP_011476102.1	nucleoside-diphosphate sugar epimerase/dehydratase	66.7	56.4	36.4
MGA_527	LOCUS_05260	sequence01:695220..695447(+)	partial			WP_147798499.1	nucleotidyltransferase domain-containing protein	84.0	47.0	61.9
MGA_528	LOCUS_05270	sequence01:695581..695853(+)	internal_stop_codon	695515..695517(+)		WP_118840086.1	DUF86 domain-containing protein	100.0	73.8	93.3
MGA_541	LOCUS_05400	sequence01:713906..714568(+)	partial			WP_213498758.1	glycosyltransferase family 4 protein	90.9	50.9	30.2
MGA_547	LOCUS_05460	sequence01:720035..720760(+)	partial			WP_010877560.1	class I SAM-dependent methyltransferase	64.7	32.6	28.7
MGA_549	LOCUS_05480	sequence01:724328..725422(+)	partial			WP_011250274.1	glycosyltransferase family 4 protein	55.5	54.4	34.4
MGA_550	LOCUS_05490	sequence01:725558..726622(+)	partial			WP_011331373.1	glycosyltransferase	81.6	73.8	26.9
MGA_557	LOCUS_05560	sequence01:732994..733455(-)	frameshift		733059	WP_051041523.1	IS630 family transposase	57.5	46.6	44.9
MGA_558	LOCUS_05570	sequence01:733487..733690(-)	frameshift		733713,733394,733524	WP_011404745.1	helix-turn-helix domain-containing protein	82.1	35.3	65.5
MGA_559	LOCUS_05580	sequence01:733996..734217(+)	partial			WP_011460613.1	DUF86 domain-containing protein	94.5	63.9	47.8
MGA_560	LOCUS_05590	sequence01:734546..734701(+)	frameshift,internal_stop_codon	734522..734524(+),734534..734536(+)	734674,734502	WP_011403405.1	GDP-mannose 4,6-dehydratase	74.5	11.6	84.2
MGA_561	LOCUS_05600	sequence01:734715..734903(+)	frameshift,internal_stop_codon	734522..734524(+),734534..734536(+)	734674,734502	WP_011403405.1	GDP-mannose 4,6-dehydratase	100.0	19.0	74.2
MGA_564	LOCUS_05630	sequence01:735893..736063(+)	partial			WP_011402987.1	hypothetical protein	98.2	67.3	58.8
MGA_567	LOCUS_05660	sequence01:738770..739054(+)	internal_stop_codon	738743..738745(+)		WP_011403417.1	Uma2 family endonuclease	98.9	55.4	88.2
MGA_568	LOCUS_05670	sequence01:739478..739846(+)	frameshift		739445	WP_103016370.1	chorismate mutase	100.0	84.1	76.4
MGA_583	LOCUS_05820	sequence01:762481..762996(-)	partial			WP_011403434.1	shikimate kinase	88.9	74.5	89.5
MGA_604	LOCUS_06030	sequence01:784618..785385(+)	internal_stop_codon	784516..784518(+)		WP_118838311.1	DNA-binding protein	100.0	82.2	83.9
MGA_625	LOCUS_06240	sequence01:807993..808259(-)	partial			WP_011403470.1	hypothetical protein	45.5	58.0	97.5
MGA_626	LOCUS_06250	sequence01:808505..808804(-)	frameshift		808850	WP_118840089.1	ABC transporter substrate-binding protein	97.0	28.7	87.5
MGA_627	LOCUS_06260	sequence01:808842..809450(-)	frameshift		808856,809475	WP_118840089.1	ABC transporter substrate-binding protein	98.5	59.4	93.5
MGA_641	LOCUS_06400	sequence01:822734..822919(-)	internal_stop_codon	822734..822736(-)		WP_118838409.1	methyl-accepting chemotaxis protein	100.0	8.8	50.8
MGA_643	LOCUS_06420	sequence01:827502..828863(+)	partial			WP_011403600.1	HDOD domain-containing protein	91.2	59.3	83.5
MGA_663	LOCUS_06620	sequence01:859536..859856(-)	frameshift,internal_stop_codon	859831..859833(-),859900..859902(-)	859809,859613	WP_011402956.1	PAS domain-containing protein	60.4	9.8	54.7
MGA_692	LOCUS_06910	sequence01:886347..887969(-)	partial			WP_118838450.1	hypothetical protein	97.2	66.2	89.3
MGA_707	LOCUS_07060	sequence01:905686..906621(-)	partial			WP_162496171.1	1-phosphofructokinase family hexose kinase	98.7	64.4	45.0
MGA_711	LOCUS_07100	sequence01:912832..914718(-)	partial			WP_118838409.1	methyl-accepting chemotaxis protein	75.5	70.5	50.0
MGA_714	LOCUS_07130	sequence01:917619..917903(-)	partial			WP_011402915.1	GAF domain-containing sensor histidine kinase	96.8	21.8	58.1
MGA_762	LOCUS_07610	sequence01:973821..974456(+)	partial			WP_011403697.1	acetyl-CoA carboxylase biotin carboxyl carrier protein	48.3	48.8	84.3
MGA_783	LOCUS_07820	sequence01:995022..995705(-)	frameshift,internal_stop_codon	995882..995884(-),995840..995842(-)	995731	WP_118838508.1	energy transducer TonB	100.0	74.7	70.5
MGA_802	LOCUS_08010	sequence01:1015437..1016579(+)	frameshift		1015171	WP_118838519.1	BamA/TamA family outer membrane protein	100.0	77.1	90.8
MGA_804	LOCUS_08030	sequence01:1018457..1018693(+)	partial			WP_118826289.1	hypothetical protein	100.0	72.9	85.9
MGA_809	LOCUS_08080	sequence01:1027177..1028070(+)	frameshift		1027138	WP_118838523.1	hypothetical protein	88.6	39.2	68.8
MGA_831	LOCUS_08300	sequence01:1057775..1058779(+)	partial			WP_011391057.1	sulfotransferase domain-containing protein	61.4	79.1	31.5
MGA_834	LOCUS_08330	sequence01:1061397..1061957(+)	frameshift		1061872,1062051,1061939,1061812,1061479,1061419	WP_118838546.1	ABC transporter ATP-binding protein	84.4	30.6	55.4
MGA_835	LOCUS_08340	sequence01:1062056..1062292(+)	frameshift,internal_stop_codon	1062291..1062293(+)	1062320,1062049,1061937,1061810,1062377,1061870	WP_118838546.1	ABC transporter ATP-binding protein	98.7	13.0	60.3
MGA_838	LOCUS_08370	sequence01:1065315..1065998(+)	internal_stop_codon	1065282..1065284(+)		WP_205421584.1	ATP-binding cassette domain-containing protein	100.0	84.7	94.7
MGA_887	LOCUS_08840	sequence02:18513..19445(-)	partial			WP_161648749.1	CapA family protein	77.4	72.9	36.4
MGA_891	LOCUS_08880	sequence02:24343..25218(+)	frameshift,internal_stop_codon	24279..24281(+)	24320,24233	WP_205421555.1	DUF58 domain-containing protein	100.0	78.4	91.1
MGA_915	LOCUS_09120	sequence02:56369..56614(-)	internal_stop_codon	56369..56371(-),56339..56341(-),56288..56290(-)		WP_011405263.1	hypothetical protein	100.0	67.5	86.4
MGA_934	LOCUS_09310	sequence02:76737..77720(-)	frameshift		77769,77830	WP_205421554.1	sugar phosphate isomerase/epimerase family protein	98.2	81.1	84.4
MGA_968	LOCUS_09650	sequence02:119426..120127(+)	frameshift,internal_stop_codon	119152..119154(+),119200..119202(+)	119346	WP_118839837.1	hypothetical protein	96.1	48.2	80.8
MGA_996	LOCUS_09930	sequence02:151935..152159(+)	partial			WP_011405184.1	hypothetical protein	73.0	62.1	83.3
MGA_997	LOCUS_09940	sequence02:152110..152337(+)	partial			WP_011405183.1	DinB family protein	81.3	70.9	68.9
MGA_1000	LOCUS_09970	sequence02:154644..154823(-)	partial			WP_011390272.1	YqaE/Pmp3 family membrane protein	72.9	82.7	69.8
MGA_1029	LOCUS_10260	sequence02:183274..183726(+)	internal_stop_codon	183145..183147(+)		WP_118839795.1	thioredoxin fold domain-containing protein	100.0	72.5	83.3
MGA_1073	LOCUS_10700	sequence02:241704..242282(+)	internal_stop_codon	241584..241586(+)		WP_011403999.1	UDP-2,3-diacylglucosamine diphosphatase	91.7	66.9	53.2
MGA_1107	LOCUS_11040	sequence02:290784..291788(+)	frameshift,internal_stop_codon	290725..290727(+)	290739	WP_118840171.1	hypothetical protein	100.0	84.1	87.1
MGA_1109	LOCUS_11060	sequence02:293432..293878(+)	frameshift		293415	WP_011405077.1	Hsp20/alpha crystallin family protein	100.0	83.6	93.2
MGA_1131	LOCUS_11280	sequence02:317018..317206(+)	frameshift		317203	WP_011405056.1	four helix bundle protein	100.0	48.4	71.0
MGA_1132	LOCUS_11290	sequence02:317172..317405(+)	frameshift		317203	WP_011405056.1	four helix bundle protein	75.3	45.3	67.2
MGA_1144	LOCUS_11410	sequence02:332038..332511(-)	frameshift		332542,332551	WP_118839723.1	hypothetical protein	100.0	83.1	90.4
MGA_1147	LOCUS_11440	sequence02:333320..333502(+)	internal_stop_codon	333500..333502(+)		WP_011405042.1	hypothetical protein	66.7	18.3	90.0
MGA_1148	LOCUS_11450	sequence02:333527..334036(+)	internal_stop_codon	333500..333502(+)		WP_011405042.1	hypothetical protein	100.0	77.5	87.0
MGA_1158	LOCUS_11550	sequence02:350690..351445(+)	partial			WP_164922558.1	SMP-30/gluconolactonase/LRE family protein	83.7	69.2	44.1
MGA_1164	LOCUS_11610	sequence02:358280..358903(+)	partial			WP_011229253.1	TetR/AcrR family transcriptional regulator	46.4	58.1	32.7
MGA_1172	LOCUS_11690	sequence02:372521..373777(+)	partial			WP_118840167.1	T9SS type A sorting domain-containing protein	95.9	72.1	70.9
MGA_1185	LOCUS_11820	sequence02:387435..388079(+)	frameshift,internal_stop_codon	387286..387288(+)	387384	WP_118839698.1	nitroreductase family protein	99.5	76.9	89.7
MGA_1196	LOCUS_11930	sequence02:401327..401794(-)	partial			WP_011404998.1	APC family permease	92.9	20.2	63.3
MGA_1222	LOCUS_12190	sequence02:438100..438384(+)	frameshift		438086	WP_118829221.1	polyhydroxyalkanoic acid system family protein	100.0	83.9	95.7
MGA_1263	LOCUS_12600	sequence02:486578..488128(+)	partial			WP_011405023.1	S8 family serine peptidase	16.1	3.6	43.7
MGA_1308	LOCUS_13050	sequence02:555573..555812(+)	partial			WP_011404882.1	DUF2470 domain-containing protein	75.9	65.2	86.7
MGA_1354	LOCUS_13510	sequence02:608800..609153(+)	partial			WP_011404838.1	DUF2237 domain-containing protein	85.5	74.6	92.0
MGA_1370	LOCUS_13670	sequence02:628749..629048(+)	frameshift,internal_stop_codon	628676..628678(+),628658..628660(+)	628687	WP_118839571.1	hypothetical protein	100.0	71.2	81.8
MGA_1373	LOCUS_13700	sequence02:630818..631138(-)	frameshift		631175	WP_011404821.1	ribosome-associated translation inhibitor RaiA	100.0	80.3	96.2
MGA_1404	LOCUS_14010	sequence02:660154..662373(+)	partial			WP_118839548.1	ATP-binding protein	99.9	68.7	84.4
MGA_1421	LOCUS_14180	sequence02:681643..681849(+)	frameshift,internal_stop_codon	681638..681640(+)	681624,681570	WP_011404776.1	PAS domain S-box protein	54.4	3.9	73.0
MGA_1426	LOCUS_14230	sequence02:687679..688029(+)	partial			WP_118839533.1	FxLYD domain-containing protein	83.6	66.7	92.8
MGA_1434	LOCUS_14310	sequence02:695935..696339(-)	partial			WP_011404764.1	fasciclin domain-containing protein	100.0	68.7	70.9
MGA_1436	LOCUS_14330	sequence02:699511..699735(-)	partial			WP_011205298.1	site-specific integrase	70.3	18.3	44.2
MGA_1452	LOCUS_14490	sequence02:722990..724600(+)	partial			WP_235044931.1	efflux RND transporter periplasmic adaptor subunit	66.8	62.0	32.8
MGA_1458	LOCUS_14550	sequence02:731222..733636(-)	partial			WP_011404729.1	DNA polymerase domain-containing protein	61.4	42.5	93.5
MGA_1468	LOCUS_14650	sequence02:741430..743610(-)	partial			WP_010877585.1	CRISPR-associated helicase/endonuclease Cas3	48.9	46.1	26.3
MGA_1509	LOCUS_15050	sequence03:40726..41058(+)	partial			WP_118840134.1	hypothetical protein	100.0	61.1	89.1
MGA_1510	LOCUS_15060	sequence03:41150..41533(-)	frameshift,internal_stop_codon	41590..41592(-)	41655	WP_183956837.1	response regulator	100.0	69.4	95.3
MGA_1618	LOCUS_16140	sequence03:179172..182027(-)	partial			WP_164929290.1	VCBS repeat-containing protein	40.2	47.9	28.9
MGA_1625	LOCUS_16210	sequence03:187933..188277(-)	frameshift		188279	WP_118830784.1	hypothetical protein	99.1	77.4	87.6
MGA_1628	LOCUS_16240	sequence03:190372..190569(-)	partial			WP_118838798.1	hypothetical protein	100.0	67.7	89.2
MGA_1645	LOCUS_16410	sequence03:203189..204076(-)	frameshift		204145,204106,204215	WP_118838788.1	zinc-dependent peptidase	95.9	78.8	90.5
MGA_1658	LOCUS_16540	sequence03:219999..220802(+)	frameshift		219874	WP_118838777.1	cytidine deaminase	100.0	61.9	82.0
MGA_1692	LOCUS_16880	sequence03:260127..261734(+)	partial			WP_007054367.1	amidohydrolase family protein	16.3	19.2	45.5
MGA_1695	LOCUS_16910	sequence03:262659..263081(-)	partial			WP_043552273.1	30S ribosomal protein S6	74.3	81.9	100.0
MGA_1700	LOCUS_16960	sequence03:269726..270124(-)	partial			WP_118838748.1	LPS export ABC transporter periplasmic protein LptC	100.0	64.1	90.9
MGA_1703	LOCUS_16990	sequence03:271548..272663(+)	partial			WP_011263833.1	SpoIIE family protein phosphatase	83.0	60.0	32.1
MGA_1721	LOCUS_17170	sequence03:290658..291869(-)	frameshift		291990	WP_011404091.1	damage-control phosphatase ARMT1 family protein	99.0	84.7	83.5
MGA_1747	LOCUS_17430	sequence03:323804..324565(-)	internal_stop_codon	324740..324742(-)		WP_118838715.1	universal stress protein	99.6	78.5	76.6
MGA_1756	LOCUS_17520	sequence03:330653..331126(-)	internal_stop_codon	331154..331156(-),331241..331243(-)		WP_118838709.1	hypothetical protein	100.0	78.4	81.9
MGA_1777	LOCUS_17730	sequence03:353156..354910(-)	frameshift		355022	WP_118838694.1	sodium:alanine symporter family protein	100.0	74.6	95.0
MGA_1814	LOCUS_18100	sequence03:408089..409075(+)	frameshift,internal_stop_codon	408045..408047(+)	407993,407869	WP_118838671.1	ATP-binding cassette domain-containing protein	96.0	78.6	86.7
MGA_1842	LOCUS_18380	sequence03:438685..439248(-)	partial			WP_003232481.1	YkvA family protein	37.4	66.0	38.6
MGA_1859	LOCUS_18550	sequence03:460598..461341(-)	internal_stop_codon	461417..461419(-)		WP_205421592.1	ABC transporter ATP-binding protein	97.6	83.7	94.2
MGA_1874	LOCUS_18700	sequence03:475794..476933(-)	frameshift		476988,476940	WP_118838638.1	aminotransferase class V-fold PLP-dependent enzyme	99.5	82.0	86.5
MGA_1877	LOCUS_18730	sequence03:479461..479907(+)	frameshift		479447	WP_118838635.1	ribonuclease HI	100.0	76.3	83.1
MGA_1888	LOCUS_18840	sequence03:492099..492536(+)	partial			WP_010981060.1	ComEA family DNA-binding protein	44.1	41.6	50.0
MGA_1938	LOCUS_19340	sequence03:555105..555881(+)	frameshift,internal_stop_codon	554963..554965(+)	555088	WP_118838601.1	4'-phosphopantetheinyl transferase superfamily protein	98.8	72.7	76.7
MGA_1945	LOCUS_19410	sequence03:565813..566544(-)	partial			WP_197524118.1	glycosyltransferase	98.4	65.6	39.8
MGA_1955	LOCUS_19510	sequence03:576958..578901(+)	partial			WP_012257457.1	GAF domain-containing protein	54.7	35.0	40.5
MGA_1974	LOCUS_19700	sequence03:598854..600242(-)	partial			WP_011074194.1	efflux RND transporter periplasmic adaptor subunit	80.1	73.5	36.1
MGA_1977	LOCUS_19730	sequence03:603160..603624(-)	partial			WP_014506491.1	ATP-binding protein	90.3	18.5	33.1
MGA_1978	LOCUS_19740	sequence03:603912..609626(-)	partial			WP_011402974.1	PAS domain S-box protein	43.6	68.1	47.3
MGA_1985	LOCUS_19810	sequence03:615237..616487(-)	frameshift		616524,616494	WP_011403843.1	PIN-like domain-containing protein	93.3	82.7	86.6
MGA_1987	LOCUS_19830	sequence03:618083..620437(-)	partial			WP_162890714.1	PAS domain S-box protein	33.7	21.7	70.8
MGA_1989	LOCUS_19850	sequence03:621036..622085(-)	partial			WP_005576223.1	PAS domain S-box protein	79.1	22.8	46.9
MGA_1998	LOCUS_19940	sequence03:629907..630152(+)	partial			WP_013061631.1	hypothetical protein	100.0	68.6	86.4
MGA_2001	LOCUS_19970	sequence03:632157..632717(+)	frameshift		632083	WP_205421586.1	peptide-methionine (S)-S-oxide reductase MsrA	100.0	81.6	92.5
MGA_2012	LOCUS_20080	sequence03:642019..642618(-)	partial			WP_011403821.1	50S ribosomal protein L17	71.9	72.6	89.5
MGA_2034	LOCUS_20300	sequence03:654689..655006(-)	partial			WP_011403800.1	50S ribosomal protein L22	85.7	74.4	94.4
MGA_2079	LOCUS_20740	sequence04:47379..48182(-)	frameshift		48251,48188	WP_118839223.1	TerB family tellurite resistance protein	100.0	82.7	88.4
MGA_2098	LOCUS_20930	sequence04:74182..75036(+)	frameshift		74013,73997,74167	WP_205421529.1	SAM-dependent chlorinase/fluorinase	100.0	73.0	95.4
MGA_2110	LOCUS_21050	sequence04:89303..89548(+)	partial			WP_011403417.1	Uma2 family endonuclease	90.1	43.5	47.9
MGA_2139	LOCUS_21340	sequence04:124817..125152(-)	frameshift		125189	WP_118831050.1	MerR family transcriptional regulator	100.0	82.8	95.5
MGA_2201	LOCUS_21960	sequence04:180631..181197(-)	partial			WP_011142877.1	type II CAAX endopeptidase family protein	45.7	48.3	39.5
MGA_2205	LOCUS_22000	sequence04:184654..185094(+)	frameshift,internal_stop_codon	185035..185037(+)	185025,184589	WP_103037129.1	integron integrase	85.6	57.1	76.8
MGA_2206	LOCUS_22010	sequence04:185091..185342(+)	frameshift,internal_stop_codon	185035..185037(+)	185025	WP_103037129.1	integron integrase	54.2	20.5	71.1
MGA_2286	LOCUS_22810	sequence04:276398..277159(+)	frameshift,internal_stop_codon	276318..276320(+),276315..276317(+)	276308	WP_011404707.1	polyprenol monophosphomannose synthase	97.6	84.3	94.3
MGA_2290	LOCUS_22850	sequence04:280615..280824(-)	frameshift		280877	WP_118839426.1	DUF2892 domain-containing protein	100.0	73.4	65.2
MGA_2296	LOCUS_22910	sequence04:288008..288313(+)	partial			WP_011088520.1	DUF2892 domain-containing protein	52.5	79.1	58.5
MGA_2305	LOCUS_23000	sequence04:299538..300212(+)	partial			WP_011962512.1	DNA polymerase III subunit alpha	87.5	12.9	39.6
MGA_2306	LOCUS_23010	sequence04:300244..301887(-)	partial			WP_022836926.1	hypothetical protein	43.9	51.6	25.1
MGA_2327	LOCUS_23220	sequence05:23771..24166(+)	partial			WP_011405371.1	LysM peptidoglycan-binding domain-containing protein	100.0	66.2	85.5
MGA_2338	LOCUS_23330	sequence05:35564..35848(+)	partial			WP_205421561.1	hypothetical protein	100.0	62.3	98.9
MGA_2362	LOCUS_23560	sequence05:65068..66477(-)	internal_stop_codon	66658..66660(-),66607..66609(-)		WP_011405406.1	tetratricopeptide repeat protein	97.7	82.7	97.2
MGA_2379	LOCUS_23730	sequence05:88740..89861(-)	partial			WP_204630977.1	serine hydrolase domain-containing protein	81.0	67.0	41.8
MGA_2381	LOCUS_23750	sequence05:90334..90684(-)	partial			WP_118839971.1	DUF4019 domain-containing protein	99.1	65.3	75.7
MGA_2390	LOCUS_23840	sequence05:99747..100172(+)	partial			WP_118840191.1	M20/M25/M40 family metallo-hydrolase	56.0	20.9	81.0
MGA_2395	LOCUS_23890	sequence05:105006..105347(+)	partial			WP_011022297.1	rhodanese-like domain-containing protein	94.7	22.8	29.0
MGA_2419	LOCUS_24130	sequence05:134928..135638(+)	partial			WP_004082388.1	glycogen-binding domain-containing protein	33.5	11.6	43.0
MGA_2422	LOCUS_24160	sequence05:137913..138863(-)	frameshift,internal_stop_codon	139096..139098(-)	139032	WP_011405465.1	isoaspartyl peptidase/L-asparaginase	100.0	78.4	89.6
MGA_2424	LOCUS_24180	sequence05:140151..140474(+)	partial			WP_103016485.1	DUF971 domain-containing protein	97.2	73.6	52.3
MGA_2435	LOCUS_24290	sequence05:154173..154814(+)	frameshift		154083	WP_118840003.1	peptide-methionine (S)-S-oxide reductase	100.0	82.6	84.5
MGA_2464	LOCUS_24580	sequence05:186124..186489(+)	partial			WP_118840021.1	dopamine receptor D4	99.2	72.7	75.0
MGA_2472	LOCUS_24660	sequence05:195642..196196(-)	internal_stop_codon	196266..196268(-)		WP_118840026.1	TlpA disulfide reductase family protein	100.0	76.0	91.3
MGA_2488	LOCUS_24820	sequence05:216388..216828(+)	frameshift		216356	WP_010903944.1	SLC13 family permease	100.0	23.6	71.9
MGA_2489	LOCUS_24830	sequence05:217128..219098(+)	frameshift		217128,217103	WP_118840036.1	methyl-accepting chemotaxis protein	99.8	83.9	83.4
MGA_2491	LOCUS_24850	sequence05:222172..223137(-)	partial			WP_164921761.1	ankyrin repeat domain-containing protein	45.5	35.1	36.3
MGA_2494	LOCUS_24880	sequence05:224709..225179(+)	frameshift		224634	WP_011405538.1	hypothetical protein	98.7	78.2	93.5
MGA_2506	LOCUS_25000	sequence05:239325..240098(-)	internal_stop_codon	240264..240266(-)		WP_118840046.1	LytTR family DNA-binding domain-containing protein	100.0	79.8	94.2
MGA_2518	LOCUS_25120	sequence05:252537..>253559(-)	partial			WP_011405559.1	PKD domain-containing protein	100.0	67.2	74.7
MGA_2520	LOCUS_25130	sequence06:1830..2060(+)	internal_stop_codon	2058..2060(+)		WP_011403025.1	DUF3667 domain-containing protein	98.7	22.8	47.4
MGA_2521	LOCUS_25140	sequence06:2166..2627(+)	internal_stop_codon	2625..2627(+),2058..2060(+)		WP_011403025.1	DUF3667 domain-containing protein	100.0	43.0	56.2
MGA_2530	LOCUS_25230	sequence06:14267..14938(+)	partial			WP_011405521.1	TlpA disulfide reductase family protein	54.7	64.5	33.6
MGA_2533	LOCUS_25260	sequence06:18048..18845(+)	partial			WP_011403037.1	LytTR family transcriptional regulator DNA-binding domain-containing protein	47.9	50.0	65.4
MGA_2546	LOCUS_25390	sequence06:35900..36697(+)	partial			WP_011402955.1	hypothetical protein	95.5	68.8	46.7
MGA_2562	LOCUS_25550	sequence06:55898..56251(+)	partial			WP_011402935.1	hypothetical protein	72.6	67.9	56.0
MGA_2566	LOCUS_25590	sequence06:61477..62724(+)	partial			WP_179862356.1	fasciclin domain-containing protein	95.7	73.6	55.6
MGA_2575	LOCUS_25680	sequence06:74614..74886(-)	frameshift		74885	WP_118838022.1	lipoate--protein ligase	57.8	13.2	65.4
MGA_2586	LOCUS_25790	sequence06:89225..90820(-)	partial			WP_118838409.1	methyl-accepting chemotaxis protein	83.1	62.7	53.6
MGA_2594	LOCUS_25870	sequence06:103215..103451(-)	frameshift,internal_stop_codon	103215..103217(-)	103088	WP_103019783.1	PIN domain-containing protein	100.0	57.4	60.3
MGA_2610	LOCUS_26030	sequence06:118876..119772(-)	partial			WP_002468003.1	thermonuclease family protein	45.0	66.9	32.1
MGA_2620	LOCUS_26130	sequence06:130867..135162(+)	partial			WP_044233342.1	HEAT repeat domain-containing protein	20.3	32.6	30.2
MGA_2623	LOCUS_26160	sequence06:141736..142386(-)	internal_stop_codon	142408..142410(-)		WP_010044806.1	site-specific integrase	99.5	62.1	34.9
MGA_2628	LOCUS_26210	sequence06:149048..149593(-)	partial			WP_001259199.1	2'-5' RNA ligase family protein	68.0	69.8	32.3
MGA_2631	LOCUS_26240	sequence06:151764..152156(-)	partial			WP_011405183.1	DinB family protein	39.2	59.3	62.7
MGA_2634	LOCUS_26270	sequence06:154769..157345(-)	partial			WP_164925729.1	DUF5916 domain-containing protein	39.3	41.5	28.2
MGA_2686	LOCUS_26770	sequence07:46260..46658(+)	frameshift		46227	WP_118838357.1	hypothetical protein	98.5	83.9	80.8
MGA_2697	LOCUS_26880	sequence07:57509..58072(-)	frameshift		58098	WP_118838365.1	TIGR00730 family Rossman fold protein	99.5	74.7	87.6
MGA_2711	LOCUS_27020	sequence07:68278..68550(+)	partial			WP_011403547.1	NUDIX domain-containing protein	100.0	62.1	80.0
MGA_2722	LOCUS_27130	sequence07:83224..83850(+)	frameshift,internal_stop_codon	83118..83120(+),83182..83184(+)	83174	WP_118838378.1	ABC transporter ATP-binding protein	100.0	81.9	85.1
MGA_2732	LOCUS_27230	sequence07:97661..98563(+)	frameshift,internal_stop_codon	97396..97398(+),97655..97657(+)	97536	WP_118828733.1	universal stress protein	100.0	72.1	83.7
MGA_2737	LOCUS_27280	sequence07:102940..104178(+)	partial			WP_164922505.1	B3/4 domain-containing protein	70.9	73.6	29.6
MGA_2738	LOCUS_27290	sequence07:104226..105020(+)	partial			WP_164922504.1	mechanosensitive ion channel	88.6	72.4	50.6
MGA_2748	LOCUS_27390	sequence07:116851..117546(-)	partial			WP_011403579.1	50S ribosomal protein L25	77.9	72.0	95.6
MGA_2767	LOCUS_27580	sequence07:133020..133223(-)	partial			WP_011403594.1	hypothetical protein	91.0	73.5	67.2
MGA_2785	LOCUS_27750	sequence08:18544..19056(+)	partial			WP_011404494.1	hypothetical protein	100.0	70.2	77.6
MGA_2797	LOCUS_27870	sequence08:31886..32446(+)	frameshift		32431	WP_118839155.1	MFS transporter	98.9	43.3	86.4
MGA_2798	LOCUS_27880	sequence08:32506..33159(+)	frameshift		32437	WP_118839155.1	MFS transporter	100.0	51.3	93.1
MGA_2816	LOCUS_28060	sequence08:50052..50234(-)	frameshift		50236	WP_011404466.1	hypothetical protein	91.7	60.4	90.9
MGA_2817	LOCUS_28070	sequence08:50397..51203(+)	partial			WP_011142886.1	pentapeptide repeat-containing protein	34.7	18.6	46.2
MGA_2835	LOCUS_28250	sequence08:74418..74618(+)	partial			WP_011404458.1	hypothetical protein	69.7	69.7	80.4
MGA_2851	LOCUS_28410	sequence08:91437..91724(-)	internal_stop_codon	91764..91766(-)		WP_118839108.1	amphi-Trp domain-containing protein	100.0	79.2	90.5
MGA_2859	LOCUS_28490	sequence08:98170..98955(-)	frameshift		99169,98995,99093,99038	WP_011404435.1	SDR family oxidoreductase	100.0	73.7	80.8
MGA_2882	LOCUS_28710	sequence09:6939..7784(+)	partial			WP_118840167.1	T9SS type A sorting domain-containing protein	84.3	37.1	37.7
MGA_2885	LOCUS_28740	sequence09:9621..10934(-)	partial			WP_020640785.1	LamG domain-containing protein	84.0	16.3	24.0
MGA_2891	LOCUS_28800	sequence09:14746..15375(-)	partial			WP_011964444.1	thioredoxin family protein	72.2	74.0	31.6
MGA_2910	LOCUS_28990	sequence09:37250..37933(+)	partial			WP_011404343.1	NAD(P)/FAD-dependent oxidoreductase	99.6	58.7	90.3
MGA_2912	LOCUS_29010	sequence09:39135..39518(+)	partial			WP_011404345.1	DUF1232 domain-containing protein	89.0	73.4	82.3
MGA_2915	LOCUS_29040	sequence09:42329..43993(+)	frameshift		42044,42228,42063	WP_118838985.1	tetratricopeptide repeat protein	99.5	82.9	78.2
MGA_2920	LOCUS_29090	sequence09:49801..50352(-)	partial			WP_011227756.1	J domain-containing protein	34.4	17.4	47.6
MGA_2936	LOCUS_29250	sequence09:71498..72055(+)	partial			WP_118839042.1	trypsin-like peptidase domain-containing protein	100.0	26.8	76.2
MGA_2943	LOCUS_29320	sequence09:76616..77218(-)	partial			WP_011404375.1	30S ribosomal protein S16	76.0	74.1	84.9
MGA_2972	LOCUS_29610	sequence09:111195..>111917(-)	partial			WP_011404403.1	peptide chain release factor 3	100.0	45.0	97.1
MGA_2975	LOCUS_29630	sequence10:2760..2972(+)	partial			WP_010044806.1	site-specific integrase	80.0	16.5	41.1
MGA_2990	LOCUS_29780	sequence10:14030..14506(-)	partial			WP_118839683.1	DUF3124 domain-containing protein	96.8	64.6	79.1
MGA_2995	LOCUS_29830	sequence10:20233..21444(-)	frameshift		21442	WP_164929330.1	heme peroxidase family protein	93.5	72.4	32.4
MGA_2997	LOCUS_29850	sequence10:24200..25228(+)	partial			WP_198598621.1	PAS domain S-box protein	73.7	17.7	60.3
MGA_2999	LOCUS_29870	sequence10:26177..26452(+)	partial			WP_005808288.1	type II toxin-antitoxin system death-on-curing family toxin	92.3	66.1	39.3
MGA_3000	LOCUS_29880	sequence10:27167..29557(-)	partial			WP_103020212.1	methyl-accepting chemotaxis protein	60.6	51.7	40.5
MGA_3001	LOCUS_29890	sequence10:30736..31011(-)	frameshift		30753	WP_011403403.1	IS982 family transposase	93.4	27.3	74.1
MGA_3003	LOCUS_29910	sequence10:31896..32183(-)	partial			WP_011404650.1	fibronectin type III domain-containing protein	100.0	66.0	41.2
MGA_3004	LOCUS_29920	sequence10:32407..36861(-)	partial			WP_102756879.1	BspA family leucine-rich repeat surface protein	31.8	77.3	41.3
MGA_3009	LOCUS_29970	sequence10:40847..43009(-)	partial			WP_018440880.1	AAA family ATPase	59.0	36.6	25.0
MGA_3022	LOCUS_30100	sequence10:63448..64671(+)	partial			WP_003407872.1	Nramp family divalent metal transporter	70.3	67.4	25.0
MGA_3032	LOCUS_30200	sequence10:73355..73657(+)	partial			WP_118840046.1	LytTR family DNA-binding domain-containing protein	95.0	29.2	47.4
MGA_3042	LOCUS_30300	sequence10:84593..86116(-)	partial			WP_130055498.1	flavin monoamine oxidase family protein	47.7	50.7	31.0
MGA_3043	LOCUS_30310	sequence10:86667..87134(+)	internal_stop_codon	86637..86639(+)		WP_011405575.1	tyrosine-type recombinase/integrase	100.0	81.2	78.1
MGA_3061	LOCUS_30470	sequence11:17213..17674(-)	internal_stop_codon	17684..17686(-),17729..17731(-)		WP_118840186.1	flagellar FliJ family protein	100.0	83.2	76.5
MGA_3071	LOCUS_30570	sequence11:25987..26928(+)	frameshift		26913	WP_118839915.1	sigma-54 dependent transcriptional regulator	99.4	60.5	91.3
MGA_3072	LOCUS_30580	sequence11:27024..27461(+)	frameshift		26916	WP_118839915.1	sigma-54 dependent transcriptional regulator	100.0	28.1	87.6
MGA_3076	LOCUS_30620	sequence11:29952..30266(-)	frameshift		30328	WP_205421558.1	flagellar protein FliS	98.1	69.9	86.3
MGA_3077	LOCUS_30630	sequence11:30783..33788(-)	partial			WP_198598621.1	PAS domain S-box protein	92.2	66.8	63.8
MGA_3078	LOCUS_30640	sequence11:34234..34488(-)	partial			WP_011405341.1	hypothetical protein	100.0	69.5	45.2
MGA_3085	LOCUS_30710	sequence12:10110..10424(+)	internal_stop_codon	10422..10424(+)		WP_011403853.1	antirestriction protein ArdA	94.2	57.6	32.7
MGA_3096	LOCUS_30820	sequence12:15419..15610(-)	partial			WP_010970457.1	very short patch repair endonuclease	66.7	29.0	59.5
MGA_3111	LOCUS_30970	sequence13:1..537(+)	partial			WP_011404420.1	DMT family transporter	100.0	56.7	73.0
MGA_3135	LOCUS_31200	sequence16:1424..>2227(-)	partial			WP_011405342.1	flagellin	100.0	62.1	51.9
