{
    "type": "genome",
    "identifier": "GCF_947581915.1",
    "organism": "Candidatus Palauibacter scopulicola",
    "title": "Candidatus Palauibacter scopulicola",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "university of alicante",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_947581915.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA112232481",
        "wgs_master": "CANPWG000000000.1",
        "refseq_category": "na",
        "taxid": "3056741",
        "species_taxid": "3056741",
        "organism_name": "Candidatus Palauibacter scopulicola",
        "infraspecific_name": "na",
        "isolate": "IRC3_bin_28",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/16",
        "asm_name": "IRC3_bin_28_clean.fasta",
        "asm_submitter": "university of alicante",
        "gbrs_paired_asm": "GCA_947581915.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/947/581/915/GCF_947581915.1_IRC3_bin_28_clean.fasta",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3616708",
        "genome_size_ungapped": "3616708",
        "gc_percent": "69.500000",
        "replicon_count": "0",
        "scaffold_count": "79",
        "contig_count": "79",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_947581915.1-RS_2024_05_06",
        "annotation_date": "2024-05-06",
        "total_gene_count": "3204",
        "protein_coding_gene_count": "3113",
        "non_coding_gene_count": "56",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-16",
    "dateModified": "2022-12-16",
    "datePublished": "2022-12-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured bacterium"
        ],
        "sample_taxid": [
            "77133"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia"
        ],
        "sample_host_location_id": [],
        "data_size": "0.990 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3616708",
        "Number of Sequences": "79",
        "Longest Sequences (bp)": "254251",
        "N50 (bp)": "101838",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "69.3",
        "Number of CDSs": "3098",
        "Average Protein Length": "355.1",
        "Coding Ratio (%)": "91.2",
        "Number of rRNAs": "2",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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            {
                "organism_name": "Longimicrobium terrae",
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                "organism_name": "Longimicrobium terrae",
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                "organism_name": "Rubrivirga marina",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Aeromicrobium choanae",
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            {
                "organism_name": "Rathayibacter caricis",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Azospirillum oleiclasticum",
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            {
                "organism_name": "Lentzea atacamensis",
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                "accession": "GCA_003269295.1",
                "taxid": 531938,
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            {
                "organism_name": "Streptomyces goshikiensis",
                "strain": "strain=JCM 4640",
                "accession": "GCA_014650555.1",
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                "relation_to_type": "type",
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                "ani": 74.7531,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Cellulomonas iranensis",
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                "accession": "GCA_001552375.1",
                "taxid": 76862,
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            {
                "organism_name": "Amycolatopsis pithecellobii",
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        ]
    },
    "_bac2feature": {
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
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    },
    "_genome_taxon": [
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        "Palauibacter",
        "scopulicola"
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}